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The map label for this gene is phoD [H]

Identifier: 187927894

GI number: 187927894

Start: 844909

End: 846528

Strand: Direct

Name: phoD [H]

Synonym: Rpic_0798

Alternate gene names: 187927894

Gene position: 844909-846528 (Clockwise)

Preceding gene: 187927893

Following gene: 187927895

Centisome position: 21.43

GC content: 64.2

Gene sequence:

>1620_bases
ATGTCCGACCAGCCGATCTTCAAGCCGACCCGCCGCACGCTGATCAAAGGCCTCGTTTCCGCCAGCGGCACCGCGCTCCT
CAGCTCGCGTATCGGCGACGTGCTGGCCCAGGGCGCCGCACCGGCCGCAATGACGTCCGAGCGCCTGCGCCCGCAAGTGC
CAGGCGGCGTGATGAGCGGTGATATCACGGCCGGCAGCGCCATCGTCTGGAGCCGCACCGATCGTCCGGCACGCATGATC
GTCGAATACTCGACGGACGCCGCCTTCAAGAACGTCGCGCGTCGCATCGGCCCCGCGGCCCTTGAAAGCAACGGCCTGAC
AGCTCGGGTCGACCTGAACGGCCTGCCAGCCGGCGCAGACCTGTTTTACCGCGTGCGCTTCCAGGACCTCGTGCACGACA
AGGCCTTCAGCGAGCCGGTTGCCGGTCGCTTCCGCACGGCACCCATGCAGGCCAATCGCCCCATCTGCTTTGTCTTCTCT
GGCGACGAGGCCGGCCAAGGCTGGGGCATCAACGAGCGCTTCGGCGGCTATCGTCTGTATGAGGCAATGCGCCGCGAATC
GCCCGACTTCTTCATCCACTCCGGCGATCAGATCTATGCCGACGGCCCGATCCAGGCCGAGGTGAAACTGCCCGACGGCG
CGCTGTGGACCAACCTCGTTACCGAGGCCAAATCGCACGTTGCACAGACGCTCGACGACTACCGCGGCGCCTTTGCCTAC
AACCAGCTGGACAAGAACAAGCGCGCGTTTTCCGCCGAAGTGCCGTTCCTCGTGCAGTGGGACGACCACGAGGTGCGCAA
CAACTGGTACCCCGGCCAGCAGATCGGCCCGGAAGAGAAGCGCTATCAGGAGCGCAGCGCATCGCTGCTGGCGGCCCGCG
CGAAGCAGGCGATGTTCGAGTACAACCCGTTCCGCTTCAATCCGATCGACCCAGAGCAGATCTACCGCGCGTTCCAGTAC
GGCCCGCTGCTCGACGTATTCATGCTGGACGAGCGCAGCTATCGCGGGCGCAATTCGCCGAACCGCCAGACCCGGCTGGA
TGCCGATTCGGCCTTCCTCGGCCCGGCACAGGCGGCGTGGCTCAAGCAATCGCTCAAGCAGTCAAAGGCGACGTGGAAGG
TGATTGCCAGCGACATGCCGATCTCGCTGGTGGTGCCTGATCTGAACCCCGATGTGCCCAAGGGCACCTATGAAGCGTGG
GCCAATGCGGATGACGGCATGCCGTCGGGCCGCGAACTGGAGTTGGCCGAGATCCTGCGCTTCATCAAGCAGGAAAACAT
CCAGAACGTGGTCTGGGTGACGGCTGACGTGCACTACGCGCAGGCTACGTACTACCACCCGTCGCGCGCCAAGTTCACGG
ATTTCAAACCGTTCTGGGAGTTCGTTGGCGGCCCCATCAACGCGGGCACCTTCGGACCGAATGAAGTGGACCAGACGTTT
GGACCGGACGTGCGCTACGTCAGCATTCCAAAGGACAATCCGCAGAACCAGTCGCCCGCGGCGCTGCAGCAGTATTACGG
TCGCGCCAAGATCGACCCGATCACGCGCACGATGCACGTATCGCTGCACGATCTCGACGGCAAATCGCTCTGGGAAGTGA
AGCTCGATCCCGAGGCGTAG

Upstream 100 bases:

>100_bases
ACGCTCGCCATCGATGTGACGGAAGCGGGCGGGTGACGTAGCGTTGTCACGGAAGCCCCCTACGCTGGCTGGCACGTTCA
TCACCGACACCGGAGCCCCC

Downstream 100 bases:

>100_bases
CAGGCGTCACCCGCAGCGCGGCGGGAGCGTATGCGATAGGATCAGCGAGCCCCCGCATCCATTCTGGCCCGCTGTGTCCG
ATATGTCCGATCGCCACGTC

Product: alkaline phosphatase

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MSDQPIFKPTRRTLIKGLVSASGTALLSSRIGDVLAQGAAPAAMTSERLRPQVPGGVMSGDITAGSAIVWSRTDRPARMI
VEYSTDAAFKNVARRIGPAALESNGLTARVDLNGLPAGADLFYRVRFQDLVHDKAFSEPVAGRFRTAPMQANRPICFVFS
GDEAGQGWGINERFGGYRLYEAMRRESPDFFIHSGDQIYADGPIQAEVKLPDGALWTNLVTEAKSHVAQTLDDYRGAFAY
NQLDKNKRAFSAEVPFLVQWDDHEVRNNWYPGQQIGPEEKRYQERSASLLAARAKQAMFEYNPFRFNPIDPEQIYRAFQY
GPLLDVFMLDERSYRGRNSPNRQTRLDADSAFLGPAQAAWLKQSLKQSKATWKVIASDMPISLVVPDLNPDVPKGTYEAW
ANADDGMPSGRELELAEILRFIKQENIQNVVWVTADVHYAQATYYHPSRAKFTDFKPFWEFVGGPINAGTFGPNEVDQTF
GPDVRYVSIPKDNPQNQSPAALQQYYGRAKIDPITRTMHVSLHDLDGKSLWEVKLDPEA

Sequences:

>Translated_539_residues
MSDQPIFKPTRRTLIKGLVSASGTALLSSRIGDVLAQGAAPAAMTSERLRPQVPGGVMSGDITAGSAIVWSRTDRPARMI
VEYSTDAAFKNVARRIGPAALESNGLTARVDLNGLPAGADLFYRVRFQDLVHDKAFSEPVAGRFRTAPMQANRPICFVFS
GDEAGQGWGINERFGGYRLYEAMRRESPDFFIHSGDQIYADGPIQAEVKLPDGALWTNLVTEAKSHVAQTLDDYRGAFAY
NQLDKNKRAFSAEVPFLVQWDDHEVRNNWYPGQQIGPEEKRYQERSASLLAARAKQAMFEYNPFRFNPIDPEQIYRAFQY
GPLLDVFMLDERSYRGRNSPNRQTRLDADSAFLGPAQAAWLKQSLKQSKATWKVIASDMPISLVVPDLNPDVPKGTYEAW
ANADDGMPSGRELELAEILRFIKQENIQNVVWVTADVHYAQATYYHPSRAKFTDFKPFWEFVGGPINAGTFGPNEVDQTF
GPDVRYVSIPKDNPQNQSPAALQQYYGRAKIDPITRTMHVSLHDLDGKSLWEVKLDPEA
>Mature_538_residues
SDQPIFKPTRRTLIKGLVSASGTALLSSRIGDVLAQGAAPAAMTSERLRPQVPGGVMSGDITAGSAIVWSRTDRPARMIV
EYSTDAAFKNVARRIGPAALESNGLTARVDLNGLPAGADLFYRVRFQDLVHDKAFSEPVAGRFRTAPMQANRPICFVFSG
DEAGQGWGINERFGGYRLYEAMRRESPDFFIHSGDQIYADGPIQAEVKLPDGALWTNLVTEAKSHVAQTLDDYRGAFAYN
QLDKNKRAFSAEVPFLVQWDDHEVRNNWYPGQQIGPEEKRYQERSASLLAARAKQAMFEYNPFRFNPIDPEQIYRAFQYG
PLLDVFMLDERSYRGRNSPNRQTRLDADSAFLGPAQAAWLKQSLKQSKATWKVIASDMPISLVVPDLNPDVPKGTYEAWA
NADDGMPSGRELELAEILRFIKQENIQNVVWVTADVHYAQATYYHPSRAKFTDFKPFWEFVGGPINAGTFGPNEVDQTFG
PDVRYVSIPKDNPQNQSPAALQQYYGRAKIDPITRTMHVSLHDLDGKSLWEVKLDPEA

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 60294; Mature: 60163

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQPIFKPTRRTLIKGLVSASGTALLSSRIGDVLAQGAAPAAMTSERLRPQVPGGVMSG
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEC
DITAGSAIVWSRTDRPARMIVEYSTDAAFKNVARRIGPAALESNGLTARVDLNGLPAGAD
CCCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCCC
LFYRVRFQDLVHDKAFSEPVAGRFRTAPMQANRPICFVFSGDEAGQGWGINERFGGYRLY
CEEEEHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHH
EAMRRESPDFFIHSGDQIYADGPIQAEVKLPDGALWTNLVTEAKSHVAQTLDDYRGAFAY
HHHHHCCCCEEEECCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH
NQLDKNKRAFSAEVPFLVQWDDHEVRNNWYPGQQIGPEEKRYQERSASLLAARAKQAMFE
HHHCCCCCEEECCCCEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YNPFRFNPIDPEQIYRAFQYGPLLDVFMLDERSYRGRNSPNRQTRLDADSAFLGPAQAAW
CCCEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LKQSLKQSKATWKVIASDMPISLVVPDLNPDVPKGTYEAWANADDGMPSGRELELAEILR
HHHHHHHHCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHH
FIKQENIQNVVWVTADVHYAQATYYHPSRAKFTDFKPFWEFVGGPINAGTFGPNEVDQTF
HHHHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHC
GPDVRYVSIPKDNPQNQSPAALQQYYGRAKIDPITRTMHVSLHDLDGKSLWEVKLDPEA
CCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCC
>Mature Secondary Structure 
SDQPIFKPTRRTLIKGLVSASGTALLSSRIGDVLAQGAAPAAMTSERLRPQVPGGVMSG
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEC
DITAGSAIVWSRTDRPARMIVEYSTDAAFKNVARRIGPAALESNGLTARVDLNGLPAGAD
CCCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCHHCCCCCCEEEEECCCCCCCCC
LFYRVRFQDLVHDKAFSEPVAGRFRTAPMQANRPICFVFSGDEAGQGWGINERFGGYRLY
CEEEEHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHH
EAMRRESPDFFIHSGDQIYADGPIQAEVKLPDGALWTNLVTEAKSHVAQTLDDYRGAFAY
HHHHHCCCCEEEECCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH
NQLDKNKRAFSAEVPFLVQWDDHEVRNNWYPGQQIGPEEKRYQERSASLLAARAKQAMFE
HHHCCCCCEEECCCCEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YNPFRFNPIDPEQIYRAFQYGPLLDVFMLDERSYRGRNSPNRQTRLDADSAFLGPAQAAW
CCCEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LKQSLKQSKATWKVIASDMPISLVVPDLNPDVPKGTYEAWANADDGMPSGRELELAEILR
HHHHHHHHCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHH
FIKQENIQNVVWVTADVHYAQATYYHPSRAKFTDFKPFWEFVGGPINAGTFGPNEVDQTF
HHHHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHC
GPDVRYVSIPKDNPQNQSPAALQQYYGRAKIDPITRTMHVSLHDLDGKSLWEVKLDPEA
CCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]