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The map label for this gene is dadA1 [H]

Identifier: 187927892

GI number: 187927892

Start: 842935

End: 844224

Strand: Reverse

Name: dadA1 [H]

Synonym: Rpic_0796

Alternate gene names: 187927892

Gene position: 844224-842935 (Counterclockwise)

Preceding gene: 187927896

Following gene: 187927884

Centisome position: 21.41

GC content: 65.97

Gene sequence:

>1290_bases
ATGCGCGTGCTCGTTCTTGGCAGCGGCGTGATCGGCGTGACGAGCGCCTATTACCTGGCCCGTGCGGGCCATGAAGTCAC
TGTCGTCGACCGCGAAGCGGGTCCGGCGCTGGAGACGAGCTTCGCCAATGCTGGCCAGATCTCGCCGGGCTATGCGTCGC
CGTGGGCCGCGCCTGGCGTACCGCTCAAAGCCATCAAATGGATGTTCCAGCAGCACGCGCCGCTTTCCATCCGCCCCGAC
GGCACGCTCTTCCAGCTCAAGTGGATGTGGCAGATGCTGCGCAACTGCGACGCCGCCAGCTACGCGCAAAACAAGGAACG
CATGGTTCGCCTGGCCGAGTACAGCCGCGACTGCATCCGCGACCTGCGCGCCGACACCGGCATCGCCTACGAAGGCCGCC
AGCAAGGCACGCTGCAAATTTTCCGCACCCAGCAACAGCTCGACGGCGCCGCGAACGACATCGCCGTGCTCGAGCGCGCC
GGCGTGCCGTACGAACTGCTTTCGCGCGAAGACCTCGTGCGCAGTGAACCGGGCCTGGCCTCGACCCGCCACAAGCTGGC
CGGTGGCTTGCGCCTTCCCAATGACGAAACGGGCGATTGCCAGCTCTTCACCACGCGCCTGGCCGCGATGGCGGAAAAGC
TCGGCGTGCGCTTCCGTTTCAACAGCACGATCAACAGCCTCATCTTCAAGAACGACGCCGTCCGCGGGGCGCTGGTCGAC
GGCCAGCCGATCGACGCCGATCTCGTGGTCGTGGCGCTGGGCAGCTACAGCACACCGTTCCTGAAGAACCTGGTGAACGT
GCCGGTCTACCCGCTCAAGGGTTTCTCGATCACCGTACCGATGACAGATGCGGGGAAGAGCCCCGTATCCACCATCCTGG
ACGAGACCTACAAAGTGGCCGTGACGCGCTTTGACGACCGAATCCGCGTGGGCGGCATGGCGCAGATTGTCGGCTACGAC
AAGCGCCTCGACCCAGGCAAGCGCAAGACGCTGGAGTTCGTGGTCAACGATCTGTTCCCGGGTGCCGGGGATGTCTCGCG
CGCGACGTTCTGGACCGGCCTGCGCCCGATGACGCCGGACGGCACGCCCATCGTGGGCCAGACGCCCGTGCGTGGCCTGT
GGCTCAACACTGGCCACGGCACGCTGGGTTGGACCATGGCCTGCGGCTCGGGCAAGCTGCTGTCGGATCTGGTGTCGGGC
CGCTCGCCTGCCATCCGCTCGGATGACCTTTCTGTGTATCGCTACCTGGGTGGCACCCAGATGCCGGCAACCAAGCCTGC
GCTGGCCTGA

Upstream 100 bases:

>100_bases
AAGTTGTTTCTGTTTCCCGCAAATATACAGAAACAATTACTGGAATTGTACGAATACGATAGCGACATCTATCGCAAATT
CATCTCCGGGGAGTATCACC

Downstream 100 bases:

>100_bases
TCGCCTACGCTGCATGCGATAAAAAAGGGAGGCAGGAGCCTCCCTTTTTTTTTTCCGGCTGATGCCGCTCAGAACAGGAC
TTCCGGCACCGCACCGATCG

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MRVLVLGSGVIGVTSAYYLARAGHEVTVVDREAGPALETSFANAGQISPGYASPWAAPGVPLKAIKWMFQQHAPLSIRPD
GTLFQLKWMWQMLRNCDAASYAQNKERMVRLAEYSRDCIRDLRADTGIAYEGRQQGTLQIFRTQQQLDGAANDIAVLERA
GVPYELLSREDLVRSEPGLASTRHKLAGGLRLPNDETGDCQLFTTRLAAMAEKLGVRFRFNSTINSLIFKNDAVRGALVD
GQPIDADLVVVALGSYSTPFLKNLVNVPVYPLKGFSITVPMTDAGKSPVSTILDETYKVAVTRFDDRIRVGGMAQIVGYD
KRLDPGKRKTLEFVVNDLFPGAGDVSRATFWTGLRPMTPDGTPIVGQTPVRGLWLNTGHGTLGWTMACGSGKLLSDLVSG
RSPAIRSDDLSVYRYLGGTQMPATKPALA

Sequences:

>Translated_429_residues
MRVLVLGSGVIGVTSAYYLARAGHEVTVVDREAGPALETSFANAGQISPGYASPWAAPGVPLKAIKWMFQQHAPLSIRPD
GTLFQLKWMWQMLRNCDAASYAQNKERMVRLAEYSRDCIRDLRADTGIAYEGRQQGTLQIFRTQQQLDGAANDIAVLERA
GVPYELLSREDLVRSEPGLASTRHKLAGGLRLPNDETGDCQLFTTRLAAMAEKLGVRFRFNSTINSLIFKNDAVRGALVD
GQPIDADLVVVALGSYSTPFLKNLVNVPVYPLKGFSITVPMTDAGKSPVSTILDETYKVAVTRFDDRIRVGGMAQIVGYD
KRLDPGKRKTLEFVVNDLFPGAGDVSRATFWTGLRPMTPDGTPIVGQTPVRGLWLNTGHGTLGWTMACGSGKLLSDLVSG
RSPAIRSDDLSVYRYLGGTQMPATKPALA
>Mature_429_residues
MRVLVLGSGVIGVTSAYYLARAGHEVTVVDREAGPALETSFANAGQISPGYASPWAAPGVPLKAIKWMFQQHAPLSIRPD
GTLFQLKWMWQMLRNCDAASYAQNKERMVRLAEYSRDCIRDLRADTGIAYEGRQQGTLQIFRTQQQLDGAANDIAVLERA
GVPYELLSREDLVRSEPGLASTRHKLAGGLRLPNDETGDCQLFTTRLAAMAEKLGVRFRFNSTINSLIFKNDAVRGALVD
GQPIDADLVVVALGSYSTPFLKNLVNVPVYPLKGFSITVPMTDAGKSPVSTILDETYKVAVTRFDDRIRVGGMAQIVGYD
KRLDPGKRKTLEFVVNDLFPGAGDVSRATFWTGLRPMTPDGTPIVGQTPVRGLWLNTGHGTLGWTMACGSGKLLSDLVSG
RSPAIRSDDLSVYRYLGGTQMPATKPALA

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=418, Percent_Identity=67.7033492822967, Blast_Score=600, Evalue=1e-173,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46653; Mature: 46653

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLVLGSGVIGVTSAYYLARAGHEVTVVDREAGPALETSFANAGQISPGYASPWAAPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
PLKAIKWMFQQHAPLSIRPDGTLFQLKWMWQMLRNCDAASYAQNKERMVRLAEYSRDCIR
CHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
DLRADTGIAYEGRQQGTLQIFRTQQQLDGAANDIAVLERAGVPYELLSREDLVRSEPGLA
HHHHCCCCEECCCCCCCEEEEEEHHHHCCCCCHHHHHHHCCCCHHHHCHHHHHHCCCCCH
STRHKLAGGLRLPNDETGDCQLFTTRLAAMAEKLGVRFRFNSTINSLIFKNDAVRGALVD
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCHHHHHHEECCCCCEEEEC
GQPIDADLVVVALGSYSTPFLKNLVNVPVYPLKGFSITVPMTDAGKSPVSTILDETYKVA
CCCCCCCEEEEEECCCCCHHHHHHHCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHEEE
VTRFDDRIRVGGMAQIVGYDKRLDPGKRKTLEFVVNDLFPGAGDVSRATFWTGLRPMTPD
EEEECCCEEECCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCC
GTPIVGQTPVRGLWLNTGHGTLGWTMACGSGKLLSDLVSGRSPAIRSDDLSVYRYLGGTQ
CCEECCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCC
MPATKPALA
CCCCCCCCC
>Mature Secondary Structure
MRVLVLGSGVIGVTSAYYLARAGHEVTVVDREAGPALETSFANAGQISPGYASPWAAPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
PLKAIKWMFQQHAPLSIRPDGTLFQLKWMWQMLRNCDAASYAQNKERMVRLAEYSRDCIR
CHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
DLRADTGIAYEGRQQGTLQIFRTQQQLDGAANDIAVLERAGVPYELLSREDLVRSEPGLA
HHHHCCCCEECCCCCCCEEEEEEHHHHCCCCCHHHHHHHCCCCHHHHCHHHHHHCCCCCH
STRHKLAGGLRLPNDETGDCQLFTTRLAAMAEKLGVRFRFNSTINSLIFKNDAVRGALVD
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCHHHHHHEECCCCCEEEEC
GQPIDADLVVVALGSYSTPFLKNLVNVPVYPLKGFSITVPMTDAGKSPVSTILDETYKVA
CCCCCCCEEEEEECCCCCHHHHHHHCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHEEE
VTRFDDRIRVGGMAQIVGYDKRLDPGKRKTLEFVVNDLFPGAGDVSRATFWTGLRPMTPD
EEEECCCEEECCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCC
GTPIVGQTPVRGLWLNTGHGTLGWTMACGSGKLLSDLVSGRSPAIRSDDLSVYRYLGGTQ
CCEECCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCC
MPATKPALA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]