Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

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The map label for this gene is 187927854

Identifier: 187927854

GI number: 187927854

Start: 796644

End: 799100

Strand: Direct

Name: 187927854

Synonym: Rpic_0758

Alternate gene names: NA

Gene position: 796644-799100 (Clockwise)

Preceding gene: 187927852

Following gene: 187927855

Centisome position: 20.21

GC content: 66.22

Gene sequence:

>2457_bases
ATGCGCCTGCATTTCCTTCTTGCCGCCGTGCTGTCCGTGGCGTTGCCTGCTCAAGCCGAGCTTCTCATCAGCGAGTACGT
AGAAGGCAGCTCGAACAACAAGGCCATCGAAATCTACAACCCGGACGGCGCCGAAGCCGATCTGTCGGTCTACAAGATCG
AGCAGTACAACAATGGCGCCAGCACGCCCACCGCGTCGTTTGCGCTCTCGGGCAAGCTGGCGCCAGGCGCCGTCCATGTG
ATGGCCCACAGCACACTGGCCAGCGTGCTCGGCAGCCGCGTCAACCAGACCGCGGCGTTCTCCTTCAACGGCGACGATGC
GCTGAGACTGACGCGCTCCGGCGTTGTTGTCGACCGCATCGGCCAGGTTGGCTATCAACCGCCGTCCGGCTTCTGGGGTA
CAGCCAGCGCCGGCACCAAGGACCACACGCTGCGCCGCCAAGGCACGGTGAAGGCGGGCGACACGGACAGCACAGCTGCC
TTCAATCCATCCCTTCAGTGGGATGCCTTCAATATCGACGACTTCTCCGACCTTGGCCTGTACAACGGGCAGGGCACCGT
CACGCCACCACCCGCCGTTGCGATGTGCGGCGCGCCGGCAACGCACCTTGCCGATGTGCAGGGCGCCGGGGCCACTTCGC
CGCTGGTCGGCCTGAACGTCGAGATCGAAGCCGTCGTGACCGCCGACTATAGTGGCGCCACCGGCTTTAACGGCTTCTTC
GTGCAACAACCCGACGCGCAGCGCCGCCGGTTGTCTGGCGTGTCGGAAGGCCTGTTCGTCTATGCGCCCGGCGTCAGCGC
CCGCGCTGGTGACCTCGTCCACCTGGTCGGCAAGGTGGACGAGAGGTACGGCCAGACGCAACTGACGCTGGCCACCGGCG
GCATCGCAAGCTGTGCCAGCGGCAACCGCGTGACGCCGGTCGACGTGACATTGCCCGTGGCCGATGCCAAGGCGTTGTCG
GCGTATGAAGGGATGCTCGTGCGCCTGCCGCAGACGCTGACGGTGAGCGAAACGTACGAGCTTGGGCGCTACGGCAGCGT
CCTGCTCAGCAACGGACGCCTGCCACTGCCGACAAACGTGGCTCCGCCCGCGCATGGCGCAGCCGCGCAGGCCGCGGCCA
ATGCGCTGAACCGCATCGTGCTCGACGATGGCTCCAATCAGCAGAATCCCGCCAGCGTGCGCTATCCAGCGCCCGGCTTG
TCGGCAACCAACCCCGTGCGTGCGGGCTATACGGTGAGCGGTGTACAAGGCGTGCTGGAAATGCGCTACAACGCCTGGCG
CCTGCAGCCCGTGCCGGGCGCGGCTGCACCGGTTTTCAATGCCGCCGCGAACCCGCGTGCCGGTGCACCTGTGCGCCACG
CGCAGGCGGATGTGCGCGTGGCTTCGTTCAACGTACTGAACTACTTCAACGGAGACGGCAAAGGCGCCGGCTTTGACGAT
CCGGCCAATCGAGGTGCCAAGACACAGGCCGAGTTCGAACGCCAGGAAGCCAAGATCGTCGCCGCCATCCGCGCCCTCAA
TGCCGACGTGGTCGGCCTGATGGAAATCGAGAACGACGGCTACGGCGACCTCAGCGCCATCCGCCGCCTGACAAGCCAGC
TCGGGGCCGACTGGCGCTATGTCGATCCTGGCGTGCCGAAGCTCGGCGGTGACGCGATCACGGTAGCCATCGTCTACAAC
AGCCGCACCGTGGAGCCCGTGGGGGCGCCGGCCACGCTGGCGATCGACAACAGGAACCGCCAGCCGCTGGCGCGCAGCTT
CCGGCGCATTGGCGACACGCAGAACTTCACCGTGGTCGTCAATCACCTGAAGTCCAAGGGCTGTTCTGGTGCGACCGGCA
AGGACGCCGACCAGGGCGACGGCCAGAGCTGCTGGAACCCAACCCGCGTACGTGCTGCCGGCCTGATCGCCGACTGGCTG
GCGACCTCACCGACCGGCGTGGCCGATGTGGGCCAGCTCCTCATTGGTGATCTCAACAGCTATGCCAAGGAAGACCCCGT
CGTGCTGTTCGCCCAGAAGGGGTATGCCGACATGGTGGCGAAGTTCGTCGGCAAGGATGCGTACAGCTATGTCTACGGCG
GCGAATCCGGCTACATCGATCACGCGCTCGCCACCCCTGGCTTGGCAGAGCGCGTGCGTGCCGTACATGAGTGGCATATC
AATGCCGACGAGCCGATCGCGCTCGAATACGCGTTCGGCCACAAGAGCGCAGAGCAACAACAAACGTTCTACGCACCGGA
CGCGTACCGCTCGTCGGATCATGACCCGGTGCTGGTCGACCTCGCCCTCAATACGCAGACCGCAGGTGGCGGCACGAGCC
CGGAAGGCGATGCGGCGGCGGGTGCGGCTACGGGCAGCACAGGGGTGGGGGGTGCCGGTGCGGTGGACCCGATTCTCGGG
CTCGTACTGGCCGCCGCTGCGGTAGCCTTGGCGCGGCGTCGTGCGTGTCGGTCTTGA

Upstream 100 bases:

>100_bases
TACAGAATGCTGAACGATCGGTGACGGCACGCCATGCGTGCGTCATCGGCGTTGCTGAGGGTATGCCGAAATCCTTTTAT
TCCCCAACTCCCCCGTCCCC

Downstream 100 bases:

>100_bases
GCGTCTGCGCTCTTCCTCGGGCGACGCGCGGCAGCTCCATCGCCAGTCGAATCGCATCCATGCGTTCGTTGACCGTTCGA
CACAGCCTTAAGGTCGTTTC

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: Extracellular Nuclease; Nuclease; Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease I; 5-Nucleotidase Domain Protein; 5-Nucleotidase Domain-Containing Protein; Extracellular Ribonuclease/Nuclease Fusion Protein; Extracellular Nuclease-Like Protein; Endonuclease/Exonuclease/Phosphatase Family; 5-Nucleotidase; PKD Domain-Containing Protein; Exported Nuclease; Endonuclease/Exonuclease/PhosphataseEndonuclease I; Outer Membrane Adhesin Like Proteiin; Extracellular Ribonuclease; LPXTG-Motif Cell Wall Anchor Domain Protein; Calcineurin-Like Phosphoesterase; Extracellular Nuclease-Like; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; DNA/RNA Non-Specific Endonuclease; Extracellular Nuclease/Phosphatase; 50S Ribosomal Type B; 5-Nucleotidase Family Protein

Number of amino acids: Translated: 818; Mature: 818

Protein sequence:

>818_residues
MRLHFLLAAVLSVALPAQAELLISEYVEGSSNNKAIEIYNPDGAEADLSVYKIEQYNNGASTPTASFALSGKLAPGAVHV
MAHSTLASVLGSRVNQTAAFSFNGDDALRLTRSGVVVDRIGQVGYQPPSGFWGTASAGTKDHTLRRQGTVKAGDTDSTAA
FNPSLQWDAFNIDDFSDLGLYNGQGTVTPPPAVAMCGAPATHLADVQGAGATSPLVGLNVEIEAVVTADYSGATGFNGFF
VQQPDAQRRRLSGVSEGLFVYAPGVSARAGDLVHLVGKVDERYGQTQLTLATGGIASCASGNRVTPVDVTLPVADAKALS
AYEGMLVRLPQTLTVSETYELGRYGSVLLSNGRLPLPTNVAPPAHGAAAQAAANALNRIVLDDGSNQQNPASVRYPAPGL
SATNPVRAGYTVSGVQGVLEMRYNAWRLQPVPGAAAPVFNAAANPRAGAPVRHAQADVRVASFNVLNYFNGDGKGAGFDD
PANRGAKTQAEFERQEAKIVAAIRALNADVVGLMEIENDGYGDLSAIRRLTSQLGADWRYVDPGVPKLGGDAITVAIVYN
SRTVEPVGAPATLAIDNRNRQPLARSFRRIGDTQNFTVVVNHLKSKGCSGATGKDADQGDGQSCWNPTRVRAAGLIADWL
ATSPTGVADVGQLLIGDLNSYAKEDPVVLFAQKGYADMVAKFVGKDAYSYVYGGESGYIDHALATPGLAERVRAVHEWHI
NADEPIALEYAFGHKSAEQQQTFYAPDAYRSSDHDPVLVDLALNTQTAGGGTSPEGDAAAGAATGSTGVGGAGAVDPILG
LVLAAAAVALARRRACRS

Sequences:

>Translated_818_residues
MRLHFLLAAVLSVALPAQAELLISEYVEGSSNNKAIEIYNPDGAEADLSVYKIEQYNNGASTPTASFALSGKLAPGAVHV
MAHSTLASVLGSRVNQTAAFSFNGDDALRLTRSGVVVDRIGQVGYQPPSGFWGTASAGTKDHTLRRQGTVKAGDTDSTAA
FNPSLQWDAFNIDDFSDLGLYNGQGTVTPPPAVAMCGAPATHLADVQGAGATSPLVGLNVEIEAVVTADYSGATGFNGFF
VQQPDAQRRRLSGVSEGLFVYAPGVSARAGDLVHLVGKVDERYGQTQLTLATGGIASCASGNRVTPVDVTLPVADAKALS
AYEGMLVRLPQTLTVSETYELGRYGSVLLSNGRLPLPTNVAPPAHGAAAQAAANALNRIVLDDGSNQQNPASVRYPAPGL
SATNPVRAGYTVSGVQGVLEMRYNAWRLQPVPGAAAPVFNAAANPRAGAPVRHAQADVRVASFNVLNYFNGDGKGAGFDD
PANRGAKTQAEFERQEAKIVAAIRALNADVVGLMEIENDGYGDLSAIRRLTSQLGADWRYVDPGVPKLGGDAITVAIVYN
SRTVEPVGAPATLAIDNRNRQPLARSFRRIGDTQNFTVVVNHLKSKGCSGATGKDADQGDGQSCWNPTRVRAAGLIADWL
ATSPTGVADVGQLLIGDLNSYAKEDPVVLFAQKGYADMVAKFVGKDAYSYVYGGESGYIDHALATPGLAERVRAVHEWHI
NADEPIALEYAFGHKSAEQQQTFYAPDAYRSSDHDPVLVDLALNTQTAGGGTSPEGDAAAGAATGSTGVGGAGAVDPILG
LVLAAAAVALARRRACRS
>Mature_818_residues
MRLHFLLAAVLSVALPAQAELLISEYVEGSSNNKAIEIYNPDGAEADLSVYKIEQYNNGASTPTASFALSGKLAPGAVHV
MAHSTLASVLGSRVNQTAAFSFNGDDALRLTRSGVVVDRIGQVGYQPPSGFWGTASAGTKDHTLRRQGTVKAGDTDSTAA
FNPSLQWDAFNIDDFSDLGLYNGQGTVTPPPAVAMCGAPATHLADVQGAGATSPLVGLNVEIEAVVTADYSGATGFNGFF
VQQPDAQRRRLSGVSEGLFVYAPGVSARAGDLVHLVGKVDERYGQTQLTLATGGIASCASGNRVTPVDVTLPVADAKALS
AYEGMLVRLPQTLTVSETYELGRYGSVLLSNGRLPLPTNVAPPAHGAAAQAAANALNRIVLDDGSNQQNPASVRYPAPGL
SATNPVRAGYTVSGVQGVLEMRYNAWRLQPVPGAAAPVFNAAANPRAGAPVRHAQADVRVASFNVLNYFNGDGKGAGFDD
PANRGAKTQAEFERQEAKIVAAIRALNADVVGLMEIENDGYGDLSAIRRLTSQLGADWRYVDPGVPKLGGDAITVAIVYN
SRTVEPVGAPATLAIDNRNRQPLARSFRRIGDTQNFTVVVNHLKSKGCSGATGKDADQGDGQSCWNPTRVRAAGLIADWL
ATSPTGVADVGQLLIGDLNSYAKEDPVVLFAQKGYADMVAKFVGKDAYSYVYGGESGYIDHALATPGLAERVRAVHEWHI
NADEPIALEYAFGHKSAEQQQTFYAPDAYRSSDHDPVLVDLALNTQTAGGGTSPEGDAAAGAATGSTGVGGAGAVDPILG
LVLAAAAVALARRRACRS

Specific function: Unknown

COG id: COG2374

COG function: function code R; Predicted extracellular nuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85199; Mature: 85199

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLHFLLAAVLSVALPAQAELLISEYVEGSSNNKAIEIYNPDGAEADLSVYKIEQYNNGA
CHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCC
STPTASFALSGKLAPGAVHVMAHSTLASVLGSRVNQTAAFSFNGDDALRLTRSGVVVDRI
CCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCHHHHH
GQVGYQPPSGFWGTASAGTKDHTLRRQGTVKAGDTDSTAAFNPSLQWDAFNIDDFSDLGL
HHCCCCCCCCCCCCCCCCCCCCHHHHCCCEECCCCCCCEEECCCCEEEEECCCCHHHCCE
YNGQGTVTPPPAVAMCGAPATHLADVQGAGATSPLVGLNVEIEAVVTADYSGATGFNGFF
ECCCCCCCCCCCCEECCCCHHHHHHCCCCCCCCCEEECCEEEEEEEEECCCCCCCCCCEE
VQQPDAQRRRLSGVSEGLFVYAPGVSARAGDLVHLVGKVDERYGQTQLTLATGGIASCAS
EECCCHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHHCCC
GNRVTPVDVTLPVADAKALSAYEGMLVRLPQTLTVSETYELGRYGSVLLSNGRLPLPTNV
CCCCCEEEEEEECCCHHHHHHHCCEEEECCCEEEEHHHHHCCCCCEEEEECCCCCCCCCC
APPAHGAAAQAAANALNRIVLDDGSNQQNPASVRYPAPGLSATNPVRAGYTVSGVQGVLE
CCCCCCHHHHHHHHHHCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCEEHHHHHHHHH
MRYNAWRLQPVPGAAAPVFNAAANPRAGAPVRHAQADVRVASFNVLNYFNGDGKGAGFDD
HCCCCEEEECCCCCCCHHHHCCCCCCCCCCCHHHHCCEEEEEEEEEEEECCCCCCCCCCC
PANRGAKTQAEFERQEAKIVAAIRALNADVVGLMEIENDGYGDLSAIRRLTSQLGADWRY
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEE
VDPGVPKLGGDAITVAIVYNSRTVEPVGAPATLAIDNRNRQPLARSFRRIGDTQNFTVVV
ECCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEE
NHLKSKGCSGATGKDADQGDGQSCWNPTRVRAAGLIADWLATSPTGVADVGQLLIGDLNS
EEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
YAKEDPVVLFAQKGYADMVAKFVGKDAYSYVYGGESGYIDHALATPGLAERVRAVHEWHI
HCCCCCEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHCCC
NADEPIALEYAFGHKSAEQQQTFYAPDAYRSSDHDPVLVDLALNTQTAGGGTSPEGDAAA
CCCCCEEEEEECCCCCCHHHHEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
GAATGSTGVGGAGAVDPILGLVLAAAAVALARRRACRS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLHFLLAAVLSVALPAQAELLISEYVEGSSNNKAIEIYNPDGAEADLSVYKIEQYNNGA
CHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCC
STPTASFALSGKLAPGAVHVMAHSTLASVLGSRVNQTAAFSFNGDDALRLTRSGVVVDRI
CCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCHHHHH
GQVGYQPPSGFWGTASAGTKDHTLRRQGTVKAGDTDSTAAFNPSLQWDAFNIDDFSDLGL
HHCCCCCCCCCCCCCCCCCCCCHHHHCCCEECCCCCCCEEECCCCEEEEECCCCHHHCCE
YNGQGTVTPPPAVAMCGAPATHLADVQGAGATSPLVGLNVEIEAVVTADYSGATGFNGFF
ECCCCCCCCCCCCEECCCCHHHHHHCCCCCCCCCEEECCEEEEEEEEECCCCCCCCCCEE
VQQPDAQRRRLSGVSEGLFVYAPGVSARAGDLVHLVGKVDERYGQTQLTLATGGIASCAS
EECCCHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHHCCC
GNRVTPVDVTLPVADAKALSAYEGMLVRLPQTLTVSETYELGRYGSVLLSNGRLPLPTNV
CCCCCEEEEEEECCCHHHHHHHCCEEEECCCEEEEHHHHHCCCCCEEEEECCCCCCCCCC
APPAHGAAAQAAANALNRIVLDDGSNQQNPASVRYPAPGLSATNPVRAGYTVSGVQGVLE
CCCCCCHHHHHHHHHHCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCEEHHHHHHHHH
MRYNAWRLQPVPGAAAPVFNAAANPRAGAPVRHAQADVRVASFNVLNYFNGDGKGAGFDD
HCCCCEEEECCCCCCCHHHHCCCCCCCCCCCHHHHCCEEEEEEEEEEEECCCCCCCCCCC
PANRGAKTQAEFERQEAKIVAAIRALNADVVGLMEIENDGYGDLSAIRRLTSQLGADWRY
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEE
VDPGVPKLGGDAITVAIVYNSRTVEPVGAPATLAIDNRNRQPLARSFRRIGDTQNFTVVV
ECCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEE
NHLKSKGCSGATGKDADQGDGQSCWNPTRVRAAGLIADWLATSPTGVADVGQLLIGDLNS
EEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
YAKEDPVVLFAQKGYADMVAKFVGKDAYSYVYGGESGYIDHALATPGLAERVRAVHEWHI
HCCCCCEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHCCC
NADEPIALEYAFGHKSAEQQQTFYAPDAYRSSDHDPVLVDLALNTQTAGGGTSPEGDAAA
CCCCCEEEEEECCCCCCHHHHEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
GAATGSTGVGGAGAVDPILGLVLAAAAVALARRRACRS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA