| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is 187927841
Identifier: 187927841
GI number: 187927841
Start: 783599
End: 784714
Strand: Direct
Name: 187927841
Synonym: Rpic_0745
Alternate gene names: NA
Gene position: 783599-784714 (Clockwise)
Preceding gene: 187927840
Following gene: 187927842
Centisome position: 19.88
GC content: 66.94
Gene sequence:
>1116_bases ATGAGCGTCCTATCTGACAAGGTTGACGCCCCGCCACCGCAGCCGCCGCACCGGCTGCTCGGGCGCAAAGGCAAACGATT GGCCCATGCCGTCGCGGTTGGCGCATTGCTGGCGGCGGGCGTTGGCGCGTCGACGCAGCCGGGTGCGCAACTCGCACCGG AGTCGCACGCGCGCAAGGTCAAGGTGCTCATCATCAGCATGTTCGCGCCCGAGGCGCAGCCGTGGATCGACAAGCTTGGC CTCACGCAAGACGTGCCGGTGCCGGGCCTGTCCATCGACTATCCGAACGTGCATTGCAACGCCAGCGACGTCTGCCAGCT CACCACGGGCATGGGCAAGGCGAATGCCGCGTCGTCGGTCTCGGCGCTGATCTACAGCGGCAAGTTCGATCTGCAGCGCA CGTACTTCCTTGTGGCTGGCATTGCGGGGATCGATCCTTCGCAGGGCACGCTCGGCAGCGCTGCGTGGGCGCGCTTCCTC GTCGACAGCGACATTGCGTGGGAGATCGATGCGCGCGAGGTGCCCGCCAACTGGCCCGGCGGCTTCATCGGCATCAACAC GCAGGGCCCCGGACAGAAGCCGCCGCTGGATTACAAGACCGAAGTCTTTCGCGTGAACGAGGCGCTGCTGCAGAAGGCGC TGGCGCTCTCCAAGGGCGCGGTGTTGGACGACAACGCCACCGCGCGCGCCTATCGCGCCAACTACCCGAGTGCACCGGCC AACCAGCCGCCTTCCGTCGTGCAATGCGACACCGCTGCCGGCAACACATACTGGCACGGCGCCAAGCTGGGCGAGCGCGA AGCAGCCTGGGTCAAGCTGCTGACGGACGGGCAGGGCACGTACTGCACCACGCAGCAGGAAGACAACGCCACGTTCGAGG CGCTCACGCGCGGCTCCAAGGCAGGCCTGCTCGACCTGCAGCGTGTGGCCGTGCTGCGCACCGCGTCCAACTTCGATAGG CCGTATCCGGGGCAGACGCCGTACGACTCGCTGGTCAACAGCAACTCGGGCGGGTTCGTGCCGTCGCTCAACAACCTGTA TCTGGCGGGCGGCCCGCTGGTCAACGAGATCGTCACGCGCTGGAGCGTGTGGAAACACGGAGTGCCCTCGCCATGA
Upstream 100 bases:
>100_bases AGATTGTGTGCCCCCTGGCAGGCAATTTGCATCGGTGGCGCGCGCTGTTCCCCACAGCGCGGGTTGATCCCATCCCTATC CCCAAAATCCGAGGAGAACC
Downstream 100 bases:
>100_bases TCGATTCCCGACTCAAGATGCCCATGCCGCGTTTGCGTGCGATCGCGAAGCTCTGCGCCGTCGGTGCCGCAGCGCTGACC TTGAACAGCTGCGCGTATGA
Product: purine nucleoside permease
Products: NA
Alternate protein names: Purine Nucleoside Permease Protein; Purine Nucleoside Permease Family Protein; CNT Family Concentrative Nucleoside/H+ Anitporter; Purine Nucleoside Permease Family; Purine Nucleoside Permease-Like Protein; NUP-Family Purine Nucleoside Permease; Purine Nucleoside Transporter; Inosine/Uridine-Preferring Nucleoside Hydrolase; Lipoprotein
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MSVLSDKVDAPPPQPPHRLLGRKGKRLAHAVAVGALLAAGVGASTQPGAQLAPESHARKVKVLIISMFAPEAQPWIDKLG LTQDVPVPGLSIDYPNVHCNASDVCQLTTGMGKANAASSVSALIYSGKFDLQRTYFLVAGIAGIDPSQGTLGSAAWARFL VDSDIAWEIDAREVPANWPGGFIGINTQGPGQKPPLDYKTEVFRVNEALLQKALALSKGAVLDDNATARAYRANYPSAPA NQPPSVVQCDTAAGNTYWHGAKLGEREAAWVKLLTDGQGTYCTTQQEDNATFEALTRGSKAGLLDLQRVAVLRTASNFDR PYPGQTPYDSLVNSNSGGFVPSLNNLYLAGGPLVNEIVTRWSVWKHGVPSP
Sequences:
>Translated_371_residues MSVLSDKVDAPPPQPPHRLLGRKGKRLAHAVAVGALLAAGVGASTQPGAQLAPESHARKVKVLIISMFAPEAQPWIDKLG LTQDVPVPGLSIDYPNVHCNASDVCQLTTGMGKANAASSVSALIYSGKFDLQRTYFLVAGIAGIDPSQGTLGSAAWARFL VDSDIAWEIDAREVPANWPGGFIGINTQGPGQKPPLDYKTEVFRVNEALLQKALALSKGAVLDDNATARAYRANYPSAPA NQPPSVVQCDTAAGNTYWHGAKLGEREAAWVKLLTDGQGTYCTTQQEDNATFEALTRGSKAGLLDLQRVAVLRTASNFDR PYPGQTPYDSLVNSNSGGFVPSLNNLYLAGGPLVNEIVTRWSVWKHGVPSP >Mature_370_residues SVLSDKVDAPPPQPPHRLLGRKGKRLAHAVAVGALLAAGVGASTQPGAQLAPESHARKVKVLIISMFAPEAQPWIDKLGL TQDVPVPGLSIDYPNVHCNASDVCQLTTGMGKANAASSVSALIYSGKFDLQRTYFLVAGIAGIDPSQGTLGSAAWARFLV DSDIAWEIDAREVPANWPGGFIGINTQGPGQKPPLDYKTEVFRVNEALLQKALALSKGAVLDDNATARAYRANYPSAPAN QPPSVVQCDTAAGNTYWHGAKLGEREAAWVKLLTDGQGTYCTTQQEDNATFEALTRGSKAGLLDLQRVAVLRTASNFDRP YPGQTPYDSLVNSNSGGFVPSLNNLYLAGGPLVNEIVTRWSVWKHGVPSP
Specific function: Unknown
COG id: COG5042
COG function: function code F; Purine nucleoside permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39377; Mature: 39246
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLSDKVDAPPPQPPHRLLGRKGKRLAHAVAVGALLAAGVGASTQPGAQLAPESHARKV CCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCEE KVLIISMFAPEAQPWIDKLGLTQDVPVPGLSIDYPNVHCNASDVCQLTTGMGKANAASSV EEEEEEEECCCCCHHHHHCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCCHHHH SALIYSGKFDLQRTYFLVAGIAGIDPSQGTLGSAAWARFLVDSDIAWEIDAREVPANWPG EEEEECCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC GFIGINTQGPGQKPPLDYKTEVFRVNEALLQKALALSKGAVLDDNATARAYRANYPSAPA CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCCC NQPPSVVQCDTAAGNTYWHGAKLGEREAAWVKLLTDGQGTYCTTQQEDNATFEALTRGSK CCCCCEEEECCCCCCCEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCHHHHHHCCCC AGLLDLQRVAVLRTASNFDRPYPGQTPYDSLVNSNSGGFVPSLNNLYLAGGPLVNEIVTR CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHH WSVWKHGVPSP HHHHCCCCCCC >Mature Secondary Structure SVLSDKVDAPPPQPPHRLLGRKGKRLAHAVAVGALLAAGVGASTQPGAQLAPESHARKV CCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCEE KVLIISMFAPEAQPWIDKLGLTQDVPVPGLSIDYPNVHCNASDVCQLTTGMGKANAASSV EEEEEEEECCCCCHHHHHCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCCHHHH SALIYSGKFDLQRTYFLVAGIAGIDPSQGTLGSAAWARFLVDSDIAWEIDAREVPANWPG EEEEECCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC GFIGINTQGPGQKPPLDYKTEVFRVNEALLQKALALSKGAVLDDNATARAYRANYPSAPA CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCCC NQPPSVVQCDTAAGNTYWHGAKLGEREAAWVKLLTDGQGTYCTTQQEDNATFEALTRGSK CCCCCEEEECCCCCCCEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCHHHHHHCCCC AGLLDLQRVAVLRTASNFDRPYPGQTPYDSLVNSNSGGFVPSLNNLYLAGGPLVNEIVTR CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHH WSVWKHGVPSP HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA