| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187927842
Identifier: 187927842
GI number: 187927842
Start: 784711
End: 785760
Strand: Direct
Name: 187927842
Synonym: Rpic_0746
Alternate gene names: NA
Gene position: 784711-785760 (Clockwise)
Preceding gene: 187927841
Following gene: 187927843
Centisome position: 19.9
GC content: 63.52
Gene sequence:
>1050_bases ATGATCGATTCCCGACTCAAGATGCCCATGCCGCGTTTGCGTGCGATCGCGAAGCTCTGCGCCGTCGGTGCCGCAGCGCT GACCTTGAACAGCTGCGCGTATGACGGAGTGAAAGTCATCGTCATCAACATGTTCCAGGGCGAAGCCCAACCCTTTATCG ACCGTTACGATCTGAAGGAGAAGGTCTATATCTCCGGCCTGTCGCCCGATGCGCCGAACATGCTGTGCAACTACGACGGC ATCTGCCAGGTCACCACGGGCATGGGGTATGCGAATGCGGCGTCGACGATTTCTGCGTTGCTCTATCGCAGCAAGCTGGA CCTCTCGCACACCTACTTTGTGATTGCCGGCATTGCGGGCATCGATCCGGGGCAGGGGACGGTGGGCTCGGCGGCGTGGG CGCGGTATGCGGTCGATTACGGTCTCTCGCACGAGATCGATGCGCGCGAGATGCCGGCCGGCTGGCCGTACGGCTACTTC GGCATCGGCACCAAGGGCCCCGGCCAGAAGCCGCCGATGGACTACCGCACCGAGGTGTTCCAGCTCAACGAGACGCTGCT GCAGAAGGCGTACACGCTGTCGAAATCGGCGACGCTGGAAGACAGCCCAGAGGCCATCGCCTTCCGCAAAAACTATGCGT ATGCGCCGGCCAACCAGCCACCCGCCGTCATCCAATGCGACGTGGCCTCCGCCGATACCTGGTGGGCCGGCCGCAACTTG GGCCAGCGCGCGCGTGATTGGGTGAAGACGATGACCGACAACAAGGGCACCTACTGCACGACGGCGCAAGAAGACAACGC CACGCTGGAAGTCCTGACGCGCGGCGCCCGTGCCGGCAAGGTCGACTTCAGCCGCGTGGCCCTGCTGCGTGCCGGGTCCG ACTTCGACCGGCCGTACGACGGCCAGAGCGCCTCCGACGGGCTCATCAACTTTGCGCAGCAGGGTGGTTTCGTGCCGGCC ACGCACAATCTCGTCAATGCGGCCAAGCCGTTGTTGGACGACATCGTGCAACACTGGCCCCAGTGGAAACAGGGGGTGCC GGCGAATTAA
Upstream 100 bases:
>100_bases GGTTCGTGCCGTCGCTCAACAACCTGTATCTGGCGGGCGGCCCGCTGGTCAACGAGATCGTCACGCGCTGGAGCGTGTGG AAACACGGAGTGCCCTCGCC
Downstream 100 bases:
>100_bases CACTTGCTGACATCACATTTCAATCTATATAATACGAATCATTCTCATTTGATGGAAGGCTAGGGCGAATGCTCAACCGC TGACCATCGCTCCAGCCGGG
Product: purine nucleoside permease
Products: NA
Alternate protein names: Purine Nucleoside Permease Protein; Purine Nucleoside Permease Family Protein; CNT Family Concentrative Nucleoside/H+ Anitporter; Purine Nucleoside Permease Family; Purine Nucleoside Permease-Like Protein; NUP-Family Purine Nucleoside Permease; Purine Nucleoside Transporter; Inosine/Uridine-Preferring Nucleoside Hydrolase; Lipoprotein
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MIDSRLKMPMPRLRAIAKLCAVGAAALTLNSCAYDGVKVIVINMFQGEAQPFIDRYDLKEKVYISGLSPDAPNMLCNYDG ICQVTTGMGYANAASTISALLYRSKLDLSHTYFVIAGIAGIDPGQGTVGSAAWARYAVDYGLSHEIDAREMPAGWPYGYF GIGTKGPGQKPPMDYRTEVFQLNETLLQKAYTLSKSATLEDSPEAIAFRKNYAYAPANQPPAVIQCDVASADTWWAGRNL GQRARDWVKTMTDNKGTYCTTAQEDNATLEVLTRGARAGKVDFSRVALLRAGSDFDRPYDGQSASDGLINFAQQGGFVPA THNLVNAAKPLLDDIVQHWPQWKQGVPAN
Sequences:
>Translated_349_residues MIDSRLKMPMPRLRAIAKLCAVGAAALTLNSCAYDGVKVIVINMFQGEAQPFIDRYDLKEKVYISGLSPDAPNMLCNYDG ICQVTTGMGYANAASTISALLYRSKLDLSHTYFVIAGIAGIDPGQGTVGSAAWARYAVDYGLSHEIDAREMPAGWPYGYF GIGTKGPGQKPPMDYRTEVFQLNETLLQKAYTLSKSATLEDSPEAIAFRKNYAYAPANQPPAVIQCDVASADTWWAGRNL GQRARDWVKTMTDNKGTYCTTAQEDNATLEVLTRGARAGKVDFSRVALLRAGSDFDRPYDGQSASDGLINFAQQGGFVPA THNLVNAAKPLLDDIVQHWPQWKQGVPAN >Mature_349_residues MIDSRLKMPMPRLRAIAKLCAVGAAALTLNSCAYDGVKVIVINMFQGEAQPFIDRYDLKEKVYISGLSPDAPNMLCNYDG ICQVTTGMGYANAASTISALLYRSKLDLSHTYFVIAGIAGIDPGQGTVGSAAWARYAVDYGLSHEIDAREMPAGWPYGYF GIGTKGPGQKPPMDYRTEVFQLNETLLQKAYTLSKSATLEDSPEAIAFRKNYAYAPANQPPAVIQCDVASADTWWAGRNL GQRARDWVKTMTDNKGTYCTTAQEDNATLEVLTRGARAGKVDFSRVALLRAGSDFDRPYDGQSASDGLINFAQQGGFVPA THNLVNAAKPLLDDIVQHWPQWKQGVPAN
Specific function: Unknown
COG id: COG5042
COG function: function code F; Purine nucleoside permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37968; Mature: 37968
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDSRLKMPMPRLRAIAKLCAVGAAALTLNSCAYDGVKVIVINMFQGEAQPFIDRYDLKE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHCCCC KVYISGLSPDAPNMLCNYDGICQVTTGMGYANAASTISALLYRSKLDLSHTYFVIAGIAG EEEEECCCCCCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECC IDPGQGTVGSAAWARYAVDYGLSHEIDAREMPAGWPYGYFGIGTKGPGQKPPMDYRTEVF CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHH QLNETLLQKAYTLSKSATLEDSPEAIAFRKNYAYAPANQPPAVIQCDVASADTWWAGRNL HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEECCCCCCCCEEEEECCCCCCCHHCCCH GQRARDWVKTMTDNKGTYCTTAQEDNATLEVLTRGARAGKVDFSRVALLRAGSDFDRPYD HHHHHHHHHHHCCCCCCEEECCCCCCCCEEEHHCCCCCCCCCHHHHHHHHCCCCCCCCCC GQSASDGLINFAQQGGFVPATHNLVNAAKPLLDDIVQHWPQWKQGVPAN CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCC >Mature Secondary Structure MIDSRLKMPMPRLRAIAKLCAVGAAALTLNSCAYDGVKVIVINMFQGEAQPFIDRYDLKE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHCCCC KVYISGLSPDAPNMLCNYDGICQVTTGMGYANAASTISALLYRSKLDLSHTYFVIAGIAG EEEEECCCCCCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECC IDPGQGTVGSAAWARYAVDYGLSHEIDAREMPAGWPYGYFGIGTKGPGQKPPMDYRTEVF CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHH QLNETLLQKAYTLSKSATLEDSPEAIAFRKNYAYAPANQPPAVIQCDVASADTWWAGRNL HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEECCCCCCCCEEEEECCCCCCCHHCCCH GQRARDWVKTMTDNKGTYCTTAQEDNATLEVLTRGARAGKVDFSRVALLRAGSDFDRPYD HHHHHHHHHHHCCCCCCEEECCCCCCCCEEEHHCCCCCCCCCHHHHHHHHCCCCCCCCCC GQSASDGLINFAQQGGFVPATHNLVNAAKPLLDDIVQHWPQWKQGVPAN CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA