| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187927838
Identifier: 187927838
GI number: 187927838
Start: 778601
End: 779053
Strand: Reverse
Name: 187927838
Synonym: Rpic_0742
Alternate gene names: NA
Gene position: 779053-778601 (Counterclockwise)
Preceding gene: 187927839
Following gene: 187927837
Centisome position: 19.76
GC content: 60.49
Gene sequence:
>453_bases ATGTGGCTTGATGCGTTGCTGGCTTACCTGCATTACATCTCGATCTTCACGCTGATCGTTTTTCTCACCGCCGAGGCCGT GGTGCTGCGCCCGGACATGACGCCCGAGATCCGCAAGCGCCTGGCACGTTATGACGCCGTGTTCGGCTTTGCTGCACTCG CGGTGCTGATCACGGGGTTGCTGCGCGTGTTCTACGGCGCCAAGGGCTACGCGTTCTATGTCCACAACCCGGTATTCCAC GTCAAGGTGGGCCTGTTCATTCTCGTGGGGCTGATGTCGATTGTTCCGACCATCAACATCCTGCGCTGGAAGAAGCAGGG CAAGACGCTGCCCGACTTCGTGCCCACGCCGTCGGAGATTGCCAAGACGCGCCGCTGGGTCATGGTCGAGTCGCACCTGA TCATCTTCATTCCGCTGGCGGCCGTGCTGATGGCGCGCGGTATCGGCATGTAA
Upstream 100 bases:
>100_bases GCTGAACCTGAACAGGGAGCAGATCGAAACGCTGCGCGCGCGCGGCGTGATCTGAGCCCTGCAATCCACGCCAACCCTTC CCCACCCTGATGAGGTCAAC
Downstream 100 bases:
>100_bases TTGCACCGGGGGACGCGCAACCCGCGTGGTGCGGCCCCAATGTTGCTCAGGGCAACGCTAGGGACAAACCCTGAACCGTT TGCCCGGGGCGCCGCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Inner Membrane Protein
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MWLDALLAYLHYISIFTLIVFLTAEAVVLRPDMTPEIRKRLARYDAVFGFAALAVLITGLLRVFYGAKGYAFYVHNPVFH VKVGLFILVGLMSIVPTINILRWKKQGKTLPDFVPTPSEIAKTRRWVMVESHLIIFIPLAAVLMARGIGM
Sequences:
>Translated_150_residues MWLDALLAYLHYISIFTLIVFLTAEAVVLRPDMTPEIRKRLARYDAVFGFAALAVLITGLLRVFYGAKGYAFYVHNPVFH VKVGLFILVGLMSIVPTINILRWKKQGKTLPDFVPTPSEIAKTRRWVMVESHLIIFIPLAAVLMARGIGM >Mature_150_residues MWLDALLAYLHYISIFTLIVFLTAEAVVLRPDMTPEIRKRLARYDAVFGFAALAVLITGLLRVFYGAKGYAFYVHNPVFH VKVGLFILVGLMSIVPTINILRWKKQGKTLPDFVPTPSEIAKTRRWVMVESHLIIFIPLAAVLMARGIGM
Specific function: Unknown
COG id: COG3556
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16947; Mature: 16947
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLDALLAYLHYISIFTLIVFLTAEAVVLRPDMTPEIRKRLARYDAVFGFAALAVLITGL CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LRVFYGAKGYAFYVHNPVFHVKVGLFILVGLMSIVPTINILRWKKQGKTLPDFVPTPSEI HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH AKTRRWVMVESHLIIFIPLAAVLMARGIGM HHHHHHHEECCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MWLDALLAYLHYISIFTLIVFLTAEAVVLRPDMTPEIRKRLARYDAVFGFAALAVLITGL CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LRVFYGAKGYAFYVHNPVFHVKVGLFILVGLMSIVPTINILRWKKQGKTLPDFVPTPSEI HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH AKTRRWVMVESHLIIFIPLAAVLMARGIGM HHHHHHHEECCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA