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The map label for this gene is 187927815

Identifier: 187927815

GI number: 187927815

Start: 753176

End: 754786

Strand: Direct

Name: 187927815

Synonym: Rpic_0719

Alternate gene names: NA

Gene position: 753176-754786 (Clockwise)

Preceding gene: 187927814

Following gene: 187927816

Centisome position: 19.1

GC content: 62.82

Gene sequence:

>1611_bases
ATGGCCGATACCCAACAAGCCGATATCGTGGTGGTGGGCTCCGGCGTGGCCGGGGCGCTGGTGGCGTACGAGCTGGCACG
CGCGGGGAAGTCGGTGCTGATGCTCGAAGCGGGGCCGCGCCTGCCGCGCTGGGAAATTGTCGAGCGCTTCCGCAACCAGG
CCGACAAGATGGATTTCATGGCGCCGTATCCGTCAACGCCATGGGCACCGCATCCGGAATATGGCCCGCCCAACAACTAC
CTCGTGCTCAAGGGTGAGCATCAGTTCAACTCGCAGTACATCCGGGCGGTGGGCGGCACGACCTGGCACTGGGCCGCATC
GACGTGGCGCTTTTTGCCGAATGATTTCAAGCTGCGCAGCGTGTATGGCATCGCGCGTGACTGGCCGATCCAGTATCAGG
ATCTTGAACGCTATTACGGCCGGGCCGAAGAGGCGCTGGGCGTGTGGGGCCCGAACGACGAAGACCTCGGCTCGCCGCGC
AGCCAGCCGTATCCCATGGCGCCGCTTCCGCTGTCATTCAGTGAACGCACGATCAAGGATGCACTCAACGCGCACGACGC
GAGCTTGCACGTGGTCACCGAGCCGGTGGCGCGCAACAGTCGCCCGTACGACGGTCGCCCGACCTGCTGCGGCAACAACA
ACTGCATGCCGATCTGCCCGATCGGAGCGATGTACAACGGCATCGTGCATGTGGAGAAAGCCGAGCAGGCCGGCGCACGG
CTGATCGAGAACGCCGTGGTCTTCAAGCTCGAAGTCGGTCCCAACAAGCGCATCGTGGCGGCGCGGTACAAGGATTCGAA
AGGCGCCGAGCACCGCGTGGAAGGCAAGTGGTTCGTGCTGGCTGCCAACGGCATCGAAACGCCCAAGCTGATGCTGATGT
CGACCAGCCAGGATTTTCCGAAGGGCGTTGGCAACAGCTCCGACATGGTGGGGCGCAACCTGATGGATCACCCTGGCACC
GGCGTGAGTTTCTATGCCGACCGCAAATTGTGGCCGGGGCGCGGGCCGCAGGAAATGACCTCGCTGATCGGCTTTCGCGA
TGGGCCGTTCCGCGCCACGCAGGCCGGCAAGAAGCTTCACCTGTCGAACATGTCGCGTATCGAGCAGGAGACGCAGCGCA
TCTTCAAGGAGGGCAAGCTCATCAAGCCCGCCGAACTGGATGCGCGCATCCGAGATCAGGCCGCGCGCTATGTGCAGTTC
GACAGTTTTCACGAGATCCTGCCTCTGCCCGAGAACCGGATTGTGCCGAGCGCAAGTGAGGTCGACGCCATCGGCATTCC
GCGTCCGGAGATCACGTACCACATCGACGACTACGTCAAACGCAGCGCCGTGCATACACGCGAGGTCTACGCGACTGCTG
CACAGGTGATGGGCGGTACCAATGTCGAGTTCCACGACGACTTCGCGCCCAACAACCACATCACCGGCGCAACCATCATG
GGTGCCGATCCGAAAAACTCCGTGGTCGACAAGGATTGCCGGACGTTTGACCACCCGAACCTGTTCATCAGCAGCAGCTC
CACCATGCCGACGGTTGGCACCGTGAACGTGACGCTGACCATTGCGGCGCTGGCGCTGCGGATTGCCGATCAACTGAAGA
AGGAGGCGTGA

Upstream 100 bases:

>100_bases
CGCTGATGTACAGCGTGGTCTCCGACACGCTGGTCATCCGCACGTATTGCCCTAATCAGCCTGGCTTCTGGGCCGAGCCC
CCCGTCGAGAGGCAAGCCTG

Downstream 100 bases:

>100_bases
GATGAAAACGATCGCTTCCTTCTCGCTGCTGTTGCTGACCGGCGTGGTGGCGAATGCCTGGGCGAAGGACACACCGGCCG
ACACCGCGCAGATCAAACGC

Product: glucose-methanol-choline oxidoreductase

Products: NA

Alternate protein names: Oxidoreductase; Gluconate 2-Dehydrogenase; Choline Dehydrogenase; FAD Dependent Oxidoreductase; GMC Oxidoreductase Family Protein; 2-Keto-Gluconate Dehydrogenase; GMC Oxidoreductase; GMC Family Oxidoreductase; Dehydrogenase Subunit; GMC Oxidoreductase Family; Glucose Dehydrogenase; Dehydrogenase Protein; Dehydrogenase Large Subunit Protein; Oxidoreductase GMC Family; Glucoside 3-Dehydrogenase; Flavoprotein Related Choline Dehydrogenase; Dehydrogenase; Choline Dehydrogenase-Like Flavoprotein; 2-Keto-Gluconate Dehydrogenase Subunit; Gluconate 2-Dehydrogenase Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; Gluconate Dehydrogenase; Glucose Dehydrogenase Subunit Alpha; Oxidoreductase-Like Protein; Choline Dehydrogenase And Flavoproteins-Like Protein; Dehydrogenase-Like Protein; L-Sorbose Dehydrogenase; 2-Keto-Gluconate Dehydrogenase Subunit-Like; Dehydrogluconate Dehydrogenase; Glucase Dehydrogenase Subunit Alpha; Transmembrane Dehydrogenase Protein; Dehydrogenase Subunit I; Dehydrogenase Subunit-Like Protein; Solbitol Dehydrogenase Large Subunit; Quinoprotein Glucose Dehydrogenase; Flavoproteins Oxidoreductases; Glucose Dehydrogenase Alpha Subunit; Oxidoreductase Chain; N-Terminal Membrane-Anchored Dehydrogenase; Oxidoreductase GMC Family Protein; Gluconate Dehydrogenase Subunit; Gluconate 2-Dehydrogenase Alpha Chain; Dehydrogenase Transmembrane Protein

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MADTQQADIVVVGSGVAGALVAYELARAGKSVLMLEAGPRLPRWEIVERFRNQADKMDFMAPYPSTPWAPHPEYGPPNNY
LVLKGEHQFNSQYIRAVGGTTWHWAASTWRFLPNDFKLRSVYGIARDWPIQYQDLERYYGRAEEALGVWGPNDEDLGSPR
SQPYPMAPLPLSFSERTIKDALNAHDASLHVVTEPVARNSRPYDGRPTCCGNNNCMPICPIGAMYNGIVHVEKAEQAGAR
LIENAVVFKLEVGPNKRIVAARYKDSKGAEHRVEGKWFVLAANGIETPKLMLMSTSQDFPKGVGNSSDMVGRNLMDHPGT
GVSFYADRKLWPGRGPQEMTSLIGFRDGPFRATQAGKKLHLSNMSRIEQETQRIFKEGKLIKPAELDARIRDQAARYVQF
DSFHEILPLPENRIVPSASEVDAIGIPRPEITYHIDDYVKRSAVHTREVYATAAQVMGGTNVEFHDDFAPNNHITGATIM
GADPKNSVVDKDCRTFDHPNLFISSSSTMPTVGTVNVTLTIAALALRIADQLKKEA

Sequences:

>Translated_536_residues
MADTQQADIVVVGSGVAGALVAYELARAGKSVLMLEAGPRLPRWEIVERFRNQADKMDFMAPYPSTPWAPHPEYGPPNNY
LVLKGEHQFNSQYIRAVGGTTWHWAASTWRFLPNDFKLRSVYGIARDWPIQYQDLERYYGRAEEALGVWGPNDEDLGSPR
SQPYPMAPLPLSFSERTIKDALNAHDASLHVVTEPVARNSRPYDGRPTCCGNNNCMPICPIGAMYNGIVHVEKAEQAGAR
LIENAVVFKLEVGPNKRIVAARYKDSKGAEHRVEGKWFVLAANGIETPKLMLMSTSQDFPKGVGNSSDMVGRNLMDHPGT
GVSFYADRKLWPGRGPQEMTSLIGFRDGPFRATQAGKKLHLSNMSRIEQETQRIFKEGKLIKPAELDARIRDQAARYVQF
DSFHEILPLPENRIVPSASEVDAIGIPRPEITYHIDDYVKRSAVHTREVYATAAQVMGGTNVEFHDDFAPNNHITGATIM
GADPKNSVVDKDCRTFDHPNLFISSSSTMPTVGTVNVTLTIAALALRIADQLKKEA
>Mature_535_residues
ADTQQADIVVVGSGVAGALVAYELARAGKSVLMLEAGPRLPRWEIVERFRNQADKMDFMAPYPSTPWAPHPEYGPPNNYL
VLKGEHQFNSQYIRAVGGTTWHWAASTWRFLPNDFKLRSVYGIARDWPIQYQDLERYYGRAEEALGVWGPNDEDLGSPRS
QPYPMAPLPLSFSERTIKDALNAHDASLHVVTEPVARNSRPYDGRPTCCGNNNCMPICPIGAMYNGIVHVEKAEQAGARL
IENAVVFKLEVGPNKRIVAARYKDSKGAEHRVEGKWFVLAANGIETPKLMLMSTSQDFPKGVGNSSDMVGRNLMDHPGTG
VSFYADRKLWPGRGPQEMTSLIGFRDGPFRATQAGKKLHLSNMSRIEQETQRIFKEGKLIKPAELDARIRDQAARYVQFD
SFHEILPLPENRIVPSASEVDAIGIPRPEITYHIDDYVKRSAVHTREVYATAAQVMGGTNVEFHDDFAPNNHITGATIMG
ADPKNSVVDKDCRTFDHPNLFISSSSTMPTVGTVNVTLTIAALALRIADQLKKEA

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59502; Mature: 59371

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTQQADIVVVGSGVAGALVAYELARAGKSVLMLEAGPRLPRWEIVERFRNQADKMDFM
CCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEE
APYPSTPWAPHPEYGPPNNYLVLKGEHQFNSQYIRAVGGTTWHWAASTWRFLPNDFKLRS
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCEEEECCHHHCCCCCCEEEEE
VYGIARDWPIQYQDLERYYGRAEEALGVWGPNDEDLGSPRSQPYPMAPLPLSFSERTIKD
ECCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
ALNAHDASLHVVTEPVARNSRPYDGRPTCCGNNNCMPICPIGAMYNGIVHVEKAEQAGAR
HHCCCCCEEEEEECHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHCCEEEEECHHHHHHH
LIENAVVFKLEVGPNKRIVAARYKDSKGAEHRVEGKWFVLAANGIETPKLMLMSTSQDFP
HHCCEEEEEEEECCCCEEEEEECCCCCCCCEEECCEEEEEECCCCCCCEEEEEECCCCCC
KGVGNSSDMVGRNLMDHPGTGVSFYADRKLWPGRGPQEMTSLIGFRDGPFRATQAGKKLH
CCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHCCCEEE
LSNMSRIEQETQRIFKEGKLIKPAELDARIRDQAARYVQFDSFHEILPLPENRIVPSASE
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCHHHCCCCCCCCCCCCCC
VDAIGIPRPEITYHIDDYVKRSAVHTREVYATAAQVMGGTNVEFHDDFAPNNHITGATIM
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEEEE
GADPKNSVVDKDCRTFDHPNLFISSSSTMPTVGTVNVTLTIAALALRIADQLKKEA
CCCCCCCCCCCHHHCCCCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADTQQADIVVVGSGVAGALVAYELARAGKSVLMLEAGPRLPRWEIVERFRNQADKMDFM
CCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEE
APYPSTPWAPHPEYGPPNNYLVLKGEHQFNSQYIRAVGGTTWHWAASTWRFLPNDFKLRS
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCEEEECCHHHCCCCCCEEEEE
VYGIARDWPIQYQDLERYYGRAEEALGVWGPNDEDLGSPRSQPYPMAPLPLSFSERTIKD
ECCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
ALNAHDASLHVVTEPVARNSRPYDGRPTCCGNNNCMPICPIGAMYNGIVHVEKAEQAGAR
HHCCCCCEEEEEECHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHCCEEEEECHHHHHHH
LIENAVVFKLEVGPNKRIVAARYKDSKGAEHRVEGKWFVLAANGIETPKLMLMSTSQDFP
HHCCEEEEEEEECCCCEEEEEECCCCCCCCEEECCEEEEEECCCCCCCEEEEEECCCCCC
KGVGNSSDMVGRNLMDHPGTGVSFYADRKLWPGRGPQEMTSLIGFRDGPFRATQAGKKLH
CCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHCCCEEE
LSNMSRIEQETQRIFKEGKLIKPAELDARIRDQAARYVQFDSFHEILPLPENRIVPSASE
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCHHHCCCCCCCCCCCCCC
VDAIGIPRPEITYHIDDYVKRSAVHTREVYATAAQVMGGTNVEFHDDFAPNNHITGATIM
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEEEE
GADPKNSVVDKDCRTFDHPNLFISSSSTMPTVGTVNVTLTIAALALRIADQLKKEA
CCCCCCCCCCCHHHCCCCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA