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The map label for this gene is 187927816

Identifier: 187927816

GI number: 187927816

Start: 754788

End: 756071

Strand: Direct

Name: 187927816

Synonym: Rpic_0720

Alternate gene names: NA

Gene position: 754788-756071 (Clockwise)

Preceding gene: 187927815

Following gene: 187927818

Centisome position: 19.14

GC content: 64.1

Gene sequence:

>1284_bases
ATGAAAACGATCGCTTCCTTCTCGCTGCTGTTGCTGACCGGCGTGGTGGCGAATGCCTGGGCGAAGGACACACCGGCCGA
CACCGCGCAGATCAAACGCGGCGAATACCTCGCCATTGCGGCGGACTGCGCGGCCTGCCATACGGCGCCCGGCGGCAAGC
CCTTTGCCGGCGGCTTGCCGATGCAGATTCCGATGCTGGGCACCATTTACAGCAGCAACATCACGCCCGATGAGAAAACC
GGCATCGGCAAATGGACGTACGAAGAATTCGAGCGCGCTGTGCGAAAAGGCGTGGATGACGACGGCAACAACCTGTATCC
GGCCATGCCGTATCCGTCGTACGCGAAGATCAACGATGCGGACATGCGCGATCTCTATGCGTACTTCCGCAACGGCGTGA
CGGCGGTGGAAAACCGGCGGCCGCGTAGCACGATCCGATGGCCGCTGAACATGCGCTGGCCGCTCAAGCTTTGGAACCTT
CTCTTCCTCAAGAGCGAGCCGTACACCCCCAAGAGTGACAAGTCGCCGACGTGGAATCGCGGTGCGTACCTCACGCAAGG
CCTGGCGCACTGCGGCACGTGCCATACACCGCGCGGTTTCGCCATGCAGGAGAAGGCGCTGGACGAGCGCGGCAGCGGCT
ATCTGGCGGGCTCGACGCTCGCGGGCTGGACGGCGTTCAACATCACCTCGGACCCCACGAGTGGCATCGGCGCATGGAAG
CGCGAACAGCTTGTGCAATATCTGCGCACCGGCAGCGTGCCCGGCGTGGCACAGGCCGCAGGGCCGATGGGCGAAGCGGT
GCAGCATAGTTTTTCGAAGATGACGATGCAGGACGTCCAGGCCATCGCCGAATATCTACGGACGGTGCCTGCGGTGAGCA
ACAACCTCGAACGCGCGCGGCAGGATTGGGGCAAGCCGGCCACCGATGTGACGACGCTGCGCGGCAAGCCCATCGAGACC
ACGATCGACGCCGCGCGCCTGTATCTCGGCAATTGCGCGACGTGTCACCAGGCCGATGGACGCGGCACGCCCGATGGTTA
CTACCCGCCGCTGCTGCACAACTCCACGGTCGGCACGCGCGATACGACCAACCTTGTGCAGGTCATTCTGTTCGGCATTG
AGCGCAAGGCGGGCGACCGGCACATCGGCATGCCGGCATTTGGACGCGAGCTATCGAACGAACAGCTGGCTGCGCTGACC
AACTACGTCACGCGCCAGTTTGGCGACCCCGCCACGCCGGCTGTGACCGCGGAAGCCATCGCCAAACGGCGCTCAGCCAA
GTAG

Upstream 100 bases:

>100_bases
AGCAGCTCCACCATGCCGACGGTTGGCACCGTGAACGTGACGCTGACCATTGCGGCGCTGGCGCTGCGGATTGCCGATCA
ACTGAAGAAGGAGGCGTGAG

Downstream 100 bases:

>100_bases
CGCCACCATGCCGGCGGCGTGTCAGCCGCCGGTGGTCAGCGGATCGCGCGACGCGGGTGTGGCGGGGCGGGGTGCAGGAC
GCTGGGGCGCCGCCGTCTTG

Product: gluconate 2-dehydrogenase

Products: NA

Alternate protein names: GA 2-DH cytochrome c subunit; GADH cytochrome c subunit [H]

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MKTIASFSLLLLTGVVANAWAKDTPADTAQIKRGEYLAIAADCAACHTAPGGKPFAGGLPMQIPMLGTIYSSNITPDEKT
GIGKWTYEEFERAVRKGVDDDGNNLYPAMPYPSYAKINDADMRDLYAYFRNGVTAVENRRPRSTIRWPLNMRWPLKLWNL
LFLKSEPYTPKSDKSPTWNRGAYLTQGLAHCGTCHTPRGFAMQEKALDERGSGYLAGSTLAGWTAFNITSDPTSGIGAWK
REQLVQYLRTGSVPGVAQAAGPMGEAVQHSFSKMTMQDVQAIAEYLRTVPAVSNNLERARQDWGKPATDVTTLRGKPIET
TIDAARLYLGNCATCHQADGRGTPDGYYPPLLHNSTVGTRDTTNLVQVILFGIERKAGDRHIGMPAFGRELSNEQLAALT
NYVTRQFGDPATPAVTAEAIAKRRSAK

Sequences:

>Translated_427_residues
MKTIASFSLLLLTGVVANAWAKDTPADTAQIKRGEYLAIAADCAACHTAPGGKPFAGGLPMQIPMLGTIYSSNITPDEKT
GIGKWTYEEFERAVRKGVDDDGNNLYPAMPYPSYAKINDADMRDLYAYFRNGVTAVENRRPRSTIRWPLNMRWPLKLWNL
LFLKSEPYTPKSDKSPTWNRGAYLTQGLAHCGTCHTPRGFAMQEKALDERGSGYLAGSTLAGWTAFNITSDPTSGIGAWK
REQLVQYLRTGSVPGVAQAAGPMGEAVQHSFSKMTMQDVQAIAEYLRTVPAVSNNLERARQDWGKPATDVTTLRGKPIET
TIDAARLYLGNCATCHQADGRGTPDGYYPPLLHNSTVGTRDTTNLVQVILFGIERKAGDRHIGMPAFGRELSNEQLAALT
NYVTRQFGDPATPAVTAEAIAKRRSAK
>Mature_427_residues
MKTIASFSLLLLTGVVANAWAKDTPADTAQIKRGEYLAIAADCAACHTAPGGKPFAGGLPMQIPMLGTIYSSNITPDEKT
GIGKWTYEEFERAVRKGVDDDGNNLYPAMPYPSYAKINDADMRDLYAYFRNGVTAVENRRPRSTIRWPLNMRWPLKLWNL
LFLKSEPYTPKSDKSPTWNRGAYLTQGLAHCGTCHTPRGFAMQEKALDERGSGYLAGSTLAGWTAFNITSDPTSGIGAWK
REQLVQYLRTGSVPGVAQAAGPMGEAVQHSFSKMTMQDVQAIAEYLRTVPAVSNNLERARQDWGKPATDVTTLRGKPIET
TIDAARLYLGNCATCHQADGRGTPDGYYPPLLHNSTVGTRDTTNLVQVILFGIERKAGDRHIGMPAFGRELSNEQLAALT
NYVTRQFGDPATPAVTAEAIAKRRSAK

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 46670; Mature: 46670

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIASFSLLLLTGVVANAWAKDTPADTAQIKRGEYLAIAADCAACHTAPGGKPFAGGLP
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEHHHHHCCCCCCCCCCCCCC
MQIPMLGTIYSSNITPDEKTGIGKWTYEEFERAVRKGVDDDGNNLYPAMPYPSYAKINDA
EECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCH
DMRDLYAYFRNGVTAVENRRPRSTIRWPLNMRWPLKLWNLLFLKSEPYTPKSDKSPTWNR
HHHHHHHHHHCCCCHHHCCCCCCEEECCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCC
GAYLTQGLAHCGTCHTPRGFAMQEKALDERGSGYLAGSTLAGWTAFNITSDPTSGIGAWK
CHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCCCCHHH
REQLVQYLRTGSVPGVAQAAGPMGEAVQHSFSKMTMQDVQAIAEYLRTVPAVSNNLERAR
HHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDWGKPATDVTTLRGKPIETTIDAARLYLGNCATCHQADGRGTPDGYYPPLLHNSTVGTR
HHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DTTNLVQVILFGIERKAGDRHIGMPAFGRELSNEQLAALTNYVTRQFGDPATPAVTAEAI
CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
AKRRSAK
HHHHCCC
>Mature Secondary Structure
MKTIASFSLLLLTGVVANAWAKDTPADTAQIKRGEYLAIAADCAACHTAPGGKPFAGGLP
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEHHHHHCCCCCCCCCCCCCC
MQIPMLGTIYSSNITPDEKTGIGKWTYEEFERAVRKGVDDDGNNLYPAMPYPSYAKINDA
EECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCH
DMRDLYAYFRNGVTAVENRRPRSTIRWPLNMRWPLKLWNLLFLKSEPYTPKSDKSPTWNR
HHHHHHHHHHCCCCHHHCCCCCCEEECCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCC
GAYLTQGLAHCGTCHTPRGFAMQEKALDERGSGYLAGSTLAGWTAFNITSDPTSGIGAWK
CHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCCCCHHH
REQLVQYLRTGSVPGVAQAAGPMGEAVQHSFSKMTMQDVQAIAEYLRTVPAVSNNLERAR
HHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDWGKPATDVTTLRGKPIETTIDAARLYLGNCATCHQADGRGTPDGYYPPLLHNSTVGTR
HHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DTTNLVQVILFGIERKAGDRHIGMPAFGRELSNEQLAALTNYVTRQFGDPATPAVTAEAI
CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
AKRRSAK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]