| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is tauD [H]
Identifier: 187927792
GI number: 187927792
Start: 734259
End: 735161
Strand: Direct
Name: tauD [H]
Synonym: Rpic_0696
Alternate gene names: 187927792
Gene position: 734259-735161 (Clockwise)
Preceding gene: 187927791
Following gene: 187927796
Centisome position: 18.62
GC content: 63.9
Gene sequence:
>903_bases ATGTCCGACGCCGTTGTTACCCCGGATGCTCCTGCCGTCCACACAGCCCGCTTCCACATTCGCCGCTTGCCTGACGCGCC GCTCGGCGCAGAGATCCTCGGCCTGGGCGATGGAGCCGATTTGTCTGACGCCGACATCGCCACGATCCGCCAAGCTTGGC TCGCACATGATGGTCTGCTCGTGTTCCGTGACGTCGAATTCACGCCGCAGGCGCAAGTGGCGTTCAGCCGGCGCTTCGGT CCGCAGCAGGTGCACGTGTTGAACCAGTTCCATCTGAGCGGACATTCGGAAATCCTCGTCGTCTCCAACGTGGTCGAAAA CGGTAAGCCAATCGGGCTGGGCGATGCGGGGCGCGACTGGCATTCCGATCTCTCATACAAGCCGTTGCCGAGCCTCGGCT CGATGCTGCTCACGCGCGAGTTGCCGGAAGAGGGCGGCGATACGTTGTTCGCCAACATGGTGCGCGCCTACGAAACGCTG CCGGCCAATCTCAAGCGCATCATCGAAGGCCGCCGTGCCGTGCATTCGTATGTGTACCGCTATGAGCGATTGCGTGCGCT GTCGACCTGGCGTCCGCCGCTCACGCAAGCGCAGCGCGACGCCGTGCCGCCGGTCGATCACCCCGTTGTGCGCACGCATC CGGAAACCGGCAAGCGTGCACTCTTCGTCAACGAGGGCTTCACCTCGCACATCATCGGCTTGCCGGAAGACGAGAGCACC AGCGTGCTGGAGCAGCTCTTCGCCCACAGCATCCGCGCCGACAACGTCTACACGCACCGCTGGTGCCCCGGCGACATGCT GTTCTGGGATAACCGCTCCACCATCCACTTTGCGCCCGGCTGCCCAGACAAGTATCGGCGCACGCTGCATCGCACGACCA TCGAAGGGGACGTGCCGGTTTAG
Upstream 100 bases:
>100_bases TCTACGGCTAAGCGCCTATCGATCTGCACATTCCTTCGTTGGCACACGACTGCGGCGGGCGGTGTAATGTGAAATTCGTC TATTGCCGCGCGCTTACATC
Downstream 100 bases:
>100_bases GCGCTGTTCGTCTACAGCCCGGATTCGGCCAGACGGGCATCAATACTTGGCAGTGTCAACGTCTGCGCAAACAGGCGCGT GAGCGATTGGCTCGCATATT
Product: Taurine dioxygenase
Products: NA
Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSDAVVTPDAPAVHTARFHIRRLPDAPLGAEILGLGDGADLSDADIATIRQAWLAHDGLLVFRDVEFTPQAQVAFSRRFG PQQVHVLNQFHLSGHSEILVVSNVVENGKPIGLGDAGRDWHSDLSYKPLPSLGSMLLTRELPEEGGDTLFANMVRAYETL PANLKRIIEGRRAVHSYVYRYERLRALSTWRPPLTQAQRDAVPPVDHPVVRTHPETGKRALFVNEGFTSHIIGLPEDEST SVLEQLFAHSIRADNVYTHRWCPGDMLFWDNRSTIHFAPGCPDKYRRTLHRTTIEGDVPV
Sequences:
>Translated_300_residues MSDAVVTPDAPAVHTARFHIRRLPDAPLGAEILGLGDGADLSDADIATIRQAWLAHDGLLVFRDVEFTPQAQVAFSRRFG PQQVHVLNQFHLSGHSEILVVSNVVENGKPIGLGDAGRDWHSDLSYKPLPSLGSMLLTRELPEEGGDTLFANMVRAYETL PANLKRIIEGRRAVHSYVYRYERLRALSTWRPPLTQAQRDAVPPVDHPVVRTHPETGKRALFVNEGFTSHIIGLPEDEST SVLEQLFAHSIRADNVYTHRWCPGDMLFWDNRSTIHFAPGCPDKYRRTLHRTTIEGDVPV >Mature_299_residues SDAVVTPDAPAVHTARFHIRRLPDAPLGAEILGLGDGADLSDADIATIRQAWLAHDGLLVFRDVEFTPQAQVAFSRRFGP QQVHVLNQFHLSGHSEILVVSNVVENGKPIGLGDAGRDWHSDLSYKPLPSLGSMLLTRELPEEGGDTLFANMVRAYETLP ANLKRIIEGRRAVHSYVYRYERLRALSTWRPPLTQAQRDAVPPVDHPVVRTHPETGKRALFVNEGFTSHIIGLPEDESTS VLEQLFAHSIRADNVYTHRWCPGDMLFWDNRSTIHFAPGCPDKYRRTLHRTTIEGDVPV
Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=285, Percent_Identity=38.5964912280702, Blast_Score=172, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6322971, Length=262, Percent_Identity=27.8625954198473, Blast_Score=92, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: =1.14.11.17 [H]
Molecular weight: Translated: 33553; Mature: 33422
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAVVTPDAPAVHTARFHIRRLPDAPLGAEILGLGDGADLSDADIATIRQAWLAHDGLL CCCCEECCCCCCHHHHHHHHEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCEE VFRDVEFTPQAQVAFSRRFGPQQVHVLNQFHLSGHSEILVVSNVVENGKPIGLGDAGRDW EEEECCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCCCCCH HSDLSYKPLPSLGSMLLTRELPEEGGDTLFANMVRAYETLPANLKRIIEGRRAVHSYVYR HCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH YERLRALSTWRPPLTQAQRDAVPPVDHPVVRTHPETGKRALFVNEGFTSHIIGLPEDEST HHHHHHHHHCCCCHHHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCCHHEECCCCCCHH SVLEQLFAHSIRADNVYTHRWCPGDMLFWDNRSTIHFAPGCPDKYRRTLHRTTIEGDVPV HHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCEEEECCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SDAVVTPDAPAVHTARFHIRRLPDAPLGAEILGLGDGADLSDADIATIRQAWLAHDGLL CCCEECCCCCCHHHHHHHHEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCEE VFRDVEFTPQAQVAFSRRFGPQQVHVLNQFHLSGHSEILVVSNVVENGKPIGLGDAGRDW EEEECCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCCCCCH HSDLSYKPLPSLGSMLLTRELPEEGGDTLFANMVRAYETLPANLKRIIEGRRAVHSYVYR HCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH YERLRALSTWRPPLTQAQRDAVPPVDHPVVRTHPETGKRALFVNEGFTSHIIGLPEDEST HHHHHHHHHCCCCHHHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCCHHEECCCCCCHH SVLEQLFAHSIRADNVYTHRWCPGDMLFWDNRSTIHFAPGCPDKYRRTLHRTTIEGDVPV HHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCEEEECCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]