| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is yeeE [C]
Identifier: 187927784
GI number: 187927784
Start: 725645
End: 726760
Strand: Direct
Name: yeeE [C]
Synonym: Rpic_0688
Alternate gene names: 187927784
Gene position: 725645-726760 (Clockwise)
Preceding gene: 187927783
Following gene: 187927785
Centisome position: 18.41
GC content: 64.96
Gene sequence:
>1116_bases ATGCCCGATATCGATCTCAACGTGTTGTCCCACACAGTGCTGTGGGGCACGTTTGCGCTGACGTTCGTGTTTGGCGCGAT CCTTCAGCGCACGCACTTCTGCACCATGGGCGCGGTGTCCGATGTCGTCAACATCGGCGACTGGAACCGGCTGCGCATGT GGGCGCTGGCCATCGGCGTGGCCATGATCGGCACGGGATGCCTGAGCTGGCTTGGCCTGATCGATACGAGCAAGACGATC TACACGGCGAGCAAGCTGCTGTGGCTGTCGTCGCTGGTGGGCGGGCTGTTGTTCGGCTTCGGCATGGTGCTGGGCTCGGG GTGCGGCAGCAAGACGCTGGTGCGCATCGGCGGCGGCAATCTCAAGTCGGTCGTGGTGTTCGTGTTCCTGGGGCTGGCGG CGTACATGACGCTCAAGGGCGTGTTTGGGGTGGTGCGTGTGGCGACGGTGGACAGCGTAGCCGTTGCGTTGCCGACGTCG CAGGATCTGCCGAGCGTGCTGGGCCACGCGTTCTCCACCGATGCGCGCGTGCTGCGTCTCGTGCTGGCGCTGGGGATCGG CGGGGCGCTGTCGCTGTGGGCGCTGCTGGGGCGCGATTTCCGCACGGGCGACAACCTGCTGGGCGGCATCGGCGTCGGGC TCATCATCGTCGGCATGTGGTACGTATCGGGGCATCTCGGTTACGTGCAGGAAGATCCGAACACGCTGCAGGAAGCGTTT GTGGCGACCAACAGCGGGCGCATGGAGGCGCTGAGCTTCGTGGCCCCGGTGTCGTATACGCTGGAGTGGCTGATGTTCTT CAGTGATACATCGAAGGTACTGACGGTCGGCATTGTGAGCGTGCTTGGCGTGATTGCAGGCTCGGCAGCGGTGGCGCTGG CCACGCGCACGTTCCGCTGGGAGGGCTTTGCCAATGCCGAGGACACGGGCAACCACATCATTGGCGGCATCCTGATGGGC ATTGGGGGCGTCACGGCGCTCGGTTGCACGATCGGGCAGGGGCTGTCGGGCGTGTCGACGCTGGCGATCGGTTCGTTCAT CGCGCTGGCCGGCATCGTGATCGGTGCGGTGCTGGCGTTCCGCTACCAGATGTGGCGAATGGAGCAGCTCGTTTGA
Upstream 100 bases:
>100_bases CGCCGGCCGCGCTTGCGGCGTGTGCGATTCGTGCCGCATCCGCAAGGCCGGCTTTGAAGCCGCGGGCGTGCCCGACCCCA CCCGCTACGTCTGAGGCACC
Downstream 100 bases:
>100_bases TCTGGTGAGCGTTGACAGAATCGCAGATATCTTCCTATAATCGCGGTCTTTGGGGTCTTTAGCTCAGTCGGTAGAGCAGT AGACTTTTAATCTATTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MPDIDLNVLSHTVLWGTFALTFVFGAILQRTHFCTMGAVSDVVNIGDWNRLRMWALAIGVAMIGTGCLSWLGLIDTSKTI YTASKLLWLSSLVGGLLFGFGMVLGSGCGSKTLVRIGGGNLKSVVVFVFLGLAAYMTLKGVFGVVRVATVDSVAVALPTS QDLPSVLGHAFSTDARVLRLVLALGIGGALSLWALLGRDFRTGDNLLGGIGVGLIIVGMWYVSGHLGYVQEDPNTLQEAF VATNSGRMEALSFVAPVSYTLEWLMFFSDTSKVLTVGIVSVLGVIAGSAAVALATRTFRWEGFANAEDTGNHIIGGILMG IGGVTALGCTIGQGLSGVSTLAIGSFIALAGIVIGAVLAFRYQMWRMEQLV
Sequences:
>Translated_371_residues MPDIDLNVLSHTVLWGTFALTFVFGAILQRTHFCTMGAVSDVVNIGDWNRLRMWALAIGVAMIGTGCLSWLGLIDTSKTI YTASKLLWLSSLVGGLLFGFGMVLGSGCGSKTLVRIGGGNLKSVVVFVFLGLAAYMTLKGVFGVVRVATVDSVAVALPTS QDLPSVLGHAFSTDARVLRLVLALGIGGALSLWALLGRDFRTGDNLLGGIGVGLIIVGMWYVSGHLGYVQEDPNTLQEAF VATNSGRMEALSFVAPVSYTLEWLMFFSDTSKVLTVGIVSVLGVIAGSAAVALATRTFRWEGFANAEDTGNHIIGGILMG IGGVTALGCTIGQGLSGVSTLAIGSFIALAGIVIGAVLAFRYQMWRMEQLV >Mature_370_residues PDIDLNVLSHTVLWGTFALTFVFGAILQRTHFCTMGAVSDVVNIGDWNRLRMWALAIGVAMIGTGCLSWLGLIDTSKTIY TASKLLWLSSLVGGLLFGFGMVLGSGCGSKTLVRIGGGNLKSVVVFVFLGLAAYMTLKGVFGVVRVATVDSVAVALPTSQ DLPSVLGHAFSTDARVLRLVLALGIGGALSLWALLGRDFRTGDNLLGGIGVGLIIVGMWYVSGHLGYVQEDPNTLQEAFV ATNSGRMEALSFVAPVSYTLEWLMFFSDTSKVLTVGIVSVLGVIAGSAAVALATRTFRWEGFANAEDTGNHIIGGILMGI GGVTALGCTIGQGLSGVSTLAIGSFIALAGIVIGAVLAFRYQMWRMEQLV
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788323, Length=355, Percent_Identity=25.9154929577465, Blast_Score=82, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38907; Mature: 38776
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDIDLNVLSHTVLWGTFALTFVFGAILQRTHFCTMGAVSDVVNIGDWNRLRMWALAIGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AMIGTGCLSWLGLIDTSKTIYTASKLLWLSSLVGGLLFGFGMVLGSGCGSKTLVRIGGGN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC LKSVVVFVFLGLAAYMTLKGVFGVVRVATVDSVAVALPTSQDLPSVLGHAFSTDARVLRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCHHHHHHH VLALGIGGALSLWALLGRDFRTGDNLLGGIGVGLIIVGMWYVSGHLGYVQEDPNTLQEAF HHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHH VATNSGRMEALSFVAPVSYTLEWLMFFSDTSKVLTVGIVSVLGVIAGSAAVALATRTFRW HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHEEE EGFANAEDTGNHIIGGILMGIGGVTALGCTIGQGLSGVSTLAIGSFIALAGIVIGAVLAF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RYQMWRMEQLV HHHHHHHHHCC >Mature Secondary Structure PDIDLNVLSHTVLWGTFALTFVFGAILQRTHFCTMGAVSDVVNIGDWNRLRMWALAIGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AMIGTGCLSWLGLIDTSKTIYTASKLLWLSSLVGGLLFGFGMVLGSGCGSKTLVRIGGGN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC LKSVVVFVFLGLAAYMTLKGVFGVVRVATVDSVAVALPTSQDLPSVLGHAFSTDARVLRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCHHHHHHH VLALGIGGALSLWALLGRDFRTGDNLLGGIGVGLIIVGMWYVSGHLGYVQEDPNTLQEAF HHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHH VATNSGRMEALSFVAPVSYTLEWLMFFSDTSKVLTVGIVSVLGVIAGSAAVALATRTFRW HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHEEE EGFANAEDTGNHIIGGILMGIGGVTALGCTIGQGLSGVSTLAIGSFIALAGIVIGAVLAF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RYQMWRMEQLV HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA