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The map label for this gene is 187927766

Identifier: 187927766

GI number: 187927766

Start: 709385

End: 710029

Strand: Direct

Name: 187927766

Synonym: Rpic_0670

Alternate gene names: NA

Gene position: 709385-710029 (Clockwise)

Preceding gene: 187927754

Following gene: 187927767

Centisome position: 17.99

GC content: 58.14

Gene sequence:

>645_bases
ATGCGCGCATTGGTTCGCGGTTCTCTTTTCGCCCTTTGGTTTCGCAAAGTCGTTCAGGCTCACCCGAGCTTGGTATCGGC
GCGACTGCGCTATTCGCGCGCACTACAAGGCCAATCGGGCGGCTCGCCTATTGTCACGACATTATTGGCAACTCGCGGCT
TCACGCTGACCGAGCTAATGGTGGTCTTGGCGATTCTCGCCATTCTCTTGGTGGTCGCGATCCCTTCTTTCGCACCGATG
CTGCGTAGCAATCGTGTTTTTGCTGTGCAAACTGAGGTCATGTCCTCGCTCGCTTTGGCGCGAAGCGAGGCCGCTAAACG
CGGCATTCCAGTGAGCGTGGTTTTGTCAGGCGCGTCTGGAGTGGTAGGTAACGAATGGGGCGCGGGTTGGTCTGTCTGGG
TCGATTTAAATGCCAACGGGGTGGTTGATAGTGGGGAGGTGTTGCGTGCACACGATGCCTTGCCACCTGGGTTCACGCTG
AGCGTGCCGAACAACGGCGCTCTCAAGTTCGATGCCCATGGTTTTCTGTCGCCGGCCGTGCTGCGCCAATTGAAGGTGTG
TTCCACCGCCAGCGGTACGTCGGGATATCAAATCACGATTCAGCCGAACGGACTGGTCGATGCTGCCAGCGCAACGTGCC
CATGA

Upstream 100 bases:

>100_bases
TAAAACAATAGTCGGGGGTTCGAGTCATGCTTAACGGGATCTCGCCCATTGGGCGATGTGGGTGCGCGATCAGGCAACGG
CATTCCGGCTGAGAGTTGAG

Downstream 100 bases:

>100_bases
ATGCTCGCCCCCTGAATTCCACTGCACGAGGCTACGCGCTGTTGGAAGCGCTGATTGCGCTTCTGGTCATTTCTGTCGGC
TTAATCGGGTTCTCACGCTT

Product: Tfp pilus assembly protein FimT-like protein

Products: NA

Alternate protein names: Fimbrial Protein FimT; Tfp Pilus Assembly Protein FimT-Like Protein; Pre-Pilin Like Leader Sequence

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MRALVRGSLFALWFRKVVQAHPSLVSARLRYSRALQGQSGGSPIVTTLLATRGFTLTELMVVLAILAILLVVAIPSFAPM
LRSNRVFAVQTEVMSSLALARSEAAKRGIPVSVVLSGASGVVGNEWGAGWSVWVDLNANGVVDSGEVLRAHDALPPGFTL
SVPNNGALKFDAHGFLSPAVLRQLKVCSTASGTSGYQITIQPNGLVDAASATCP

Sequences:

>Translated_214_residues
MRALVRGSLFALWFRKVVQAHPSLVSARLRYSRALQGQSGGSPIVTTLLATRGFTLTELMVVLAILAILLVVAIPSFAPM
LRSNRVFAVQTEVMSSLALARSEAAKRGIPVSVVLSGASGVVGNEWGAGWSVWVDLNANGVVDSGEVLRAHDALPPGFTL
SVPNNGALKFDAHGFLSPAVLRQLKVCSTASGTSGYQITIQPNGLVDAASATCP
>Mature_214_residues
MRALVRGSLFALWFRKVVQAHPSLVSARLRYSRALQGQSGGSPIVTTLLATRGFTLTELMVVLAILAILLVVAIPSFAPM
LRSNRVFAVQTEVMSSLALARSEAAKRGIPVSVVLSGASGVVGNEWGAGWSVWVDLNANGVVDSGEVLRAHDALPPGFTL
SVPNNGALKFDAHGFLSPAVLRQLKVCSTASGTSGYQITIQPNGLVDAASATCP

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22393; Mature: 22393

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALVRGSLFALWFRKVVQAHPSLVSARLRYSRALQGQSGGSPIVTTLLATRGFTLTELM
CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHH
VVLAILAILLVVAIPSFAPMLRSNRVFAVQTEVMSSLALARSEAAKRGIPVSVVLSGASG
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
VVGNEWGAGWSVWVDLNANGVVDSGEVLRAHDALPPGFTLSVPNNGALKFDAHGFLSPAV
CCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCEEEECCCCCCEEECCCCCCCHHH
LRQLKVCSTASGTSGYQITIQPNGLVDAASATCP
HHHHHHHCCCCCCCCEEEEECCCCCEECCCCCCC
>Mature Secondary Structure
MRALVRGSLFALWFRKVVQAHPSLVSARLRYSRALQGQSGGSPIVTTLLATRGFTLTELM
CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHH
VVLAILAILLVVAIPSFAPMLRSNRVFAVQTEVMSSLALARSEAAKRGIPVSVVLSGASG
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
VVGNEWGAGWSVWVDLNANGVVDSGEVLRAHDALPPGFTLSVPNNGALKFDAHGFLSPAV
CCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCEEEECCCCCCEEECCCCCCCHHH
LRQLKVCSTASGTSGYQITIQPNGLVDAASATCP
HHHHHHHCCCCCCCCEEEEECCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA