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The map label for this gene is hyaC [C]

Identifier: 187927670

GI number: 187927670

Start: 607315

End: 608046

Strand: Direct

Name: hyaC [C]

Synonym: Rpic_0574

Alternate gene names: 187927670

Gene position: 607315-608046 (Clockwise)

Preceding gene: 187927669

Following gene: 187927671

Centisome position: 15.4

GC content: 64.07

Gene sequence:

>732_bases
ATGAACACAATGTCCGCATCCCGCGCTGAAGCCATGAAAACCGATTCCATCACCCGCCGCATCCTGGTTTGGGATGCGCC
GACCCGCCTCTTTCACTGGCTGCTGGCGCTGAGCTTCCTGGGTGCCTACTTGACCGCGGAAAGTGAGCAGTGGCGCCTTG
TCCACATCACACTCGGATACACGATGGCGGCGCTGGTCGGCTTTCGACTGGTGTGGGGCATGGTGGGCACGCGATACGCT
AGGTTTTCCAGCTTCGTACGGTCCCCCGCTGCCGCACTCCGCTATTTGACCAGCATCCTGCGCGGGCGGCCGGAGCACCA
TATTGACCACAACCCCGCTGGTGCGCTTGCTATCATCGCCTTGCTGCTGATGGCGTGCGGCCTGGCAGGAACGGGCTGGG
CCACCTACAACGATGTCGGCGGTGACTGGCTCGGCGAACTGCACGAGGGCTTCGCCAACGCAATGCTTGCACTGGTGGGC
ATTCATGTTCTCGCCGTCTTTGCCAGCAGTTGGCTGCACCGTGAGAATCTGGTTGGCGCGATGATCAGCGGACGCAAGAC
CGGCCTGCCGAACGAGGGCATCCGCCGTGCGTGGTCGAGTGTCGCGGGCCTGATGTTGGTGGCTGTGCTGGGCTTCTGGT
GGACGCAGTGGCAGTCCGCGCCGCCGGCCGGGGTCACTGACCGTCCCGCGGCCTCCGCGAAGCATCACGACGCCGACCGC
GACGACTATTGA

Upstream 100 bases:

>100_bases
ACCCACGACGAAGTGCCGACTGCAGTGTGGCGCCGGCCTGCCATCAAGAGCGCCTCGAACTGCGCTGCCTGCCATACCAA
GGCGGATCAAGGCGACTTCA

Downstream 100 bases:

>100_bases
TCCAAACCGGTACCGAGCGGAGATCTCATCCGTGCGCATCCTGCTTGTCGAAGACGACCCCCTGCTCGGAGACGGCATTC
GTGCGGGCCTGCAGCAGCAG

Product: cytochrome B561

Products: oxidized ferredoxin; H2 [C]

Alternate protein names: Cytochrome; B-Type Cytochrome; Hydrogenase Cytochrome B-Type Subunit; Cytochrome B/B6 Domain; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; Nickel-Dependent Hydrogenase Cytochrome B-Type Subunit; Dihem Cytochrome C; Nickel-Dependent Hydrogenase Cytochrome B Subunit; Hydrogenase Cytochrome B-Type Subunit Protein; Cytochrome B Oxidoreductase Protein; Integral Membrane Protein; Cytochrome C Family Protein

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNTMSASRAEAMKTDSITRRILVWDAPTRLFHWLLALSFLGAYLTAESEQWRLVHITLGYTMAALVGFRLVWGMVGTRYA
RFSSFVRSPAAALRYLTSILRGRPEHHIDHNPAGALAIIALLLMACGLAGTGWATYNDVGGDWLGELHEGFANAMLALVG
IHVLAVFASSWLHRENLVGAMISGRKTGLPNEGIRRAWSSVAGLMLVAVLGFWWTQWQSAPPAGVTDRPAASAKHHDADR
DDY

Sequences:

>Translated_243_residues
MNTMSASRAEAMKTDSITRRILVWDAPTRLFHWLLALSFLGAYLTAESEQWRLVHITLGYTMAALVGFRLVWGMVGTRYA
RFSSFVRSPAAALRYLTSILRGRPEHHIDHNPAGALAIIALLLMACGLAGTGWATYNDVGGDWLGELHEGFANAMLALVG
IHVLAVFASSWLHRENLVGAMISGRKTGLPNEGIRRAWSSVAGLMLVAVLGFWWTQWQSAPPAGVTDRPAASAKHHDADR
DDY
>Mature_243_residues
MNTMSASRAEAMKTDSITRRILVWDAPTRLFHWLLALSFLGAYLTAESEQWRLVHITLGYTMAALVGFRLVWGMVGTRYA
RFSSFVRSPAAALRYLTSILRGRPEHHIDHNPAGALAIIALLLMACGLAGTGWATYNDVGGDWLGELHEGFANAMLALVG
IHVLAVFASSWLHRENLVGAMISGRKTGLPNEGIRRAWSSVAGLMLVAVLGFWWTQWQSAPPAGVTDRPAASAKHHDADR
DDY

Specific function: Probable B-Type Cytochrome. [C]

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26669; Mature: 26669

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTMSASRAEAMKTDSITRRILVWDAPTRLFHWLLALSFLGAYLTAESEQWRLVHITLGY
CCCCCHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHH
TMAALVGFRLVWGMVGTRYARFSSFVRSPAAALRYLTSILRGRPEHHIDHNPAGALAIIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
LLLMACGLAGTGWATYNDVGGDWLGELHEGFANAMLALVGIHVLAVFASSWLHRENLVGA
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MISGRKTGLPNEGIRRAWSSVAGLMLVAVLGFWWTQWQSAPPAGVTDRPAASAKHHDADR
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
DDY
CCC
>Mature Secondary Structure
MNTMSASRAEAMKTDSITRRILVWDAPTRLFHWLLALSFLGAYLTAESEQWRLVHITLGY
CCCCCHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHH
TMAALVGFRLVWGMVGTRYARFSSFVRSPAAALRYLTSILRGRPEHHIDHNPAGALAIIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
LLLMACGLAGTGWATYNDVGGDWLGELHEGFANAMLALVGIHVLAVFASSWLHRENLVGA
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MISGRKTGLPNEGIRRAWSSVAGLMLVAVLGFWWTQWQSAPPAGVTDRPAASAKHHDADR
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
DDY
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Reduced ferredoxin; 2 H+ [C]

Specific reaction: Reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2 [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA