| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187927614
Identifier: 187927614
GI number: 187927614
Start: 551954
End: 553219
Strand: Direct
Name: 187927614
Synonym: Rpic_0514
Alternate gene names: NA
Gene position: 551954-553219 (Clockwise)
Preceding gene: 187927609
Following gene: 187927615
Centisome position: 14.0
GC content: 66.35
Gene sequence:
>1266_bases ATGAAGATCGCCGTCATCGGGGCGGGCATCGGCGGCCTGACGCTCGCGTTGATGGCCGAGCGCCAAGGTTTCGAGGTCGA AGTGTGGGAGGCTGTGCAGACGCTGCGGCCGCTGGGCGTTGGCATCAACCTGCTGCCGCACGCCGCGCGCCAGTTGTGCG AACTGGGCCTGGAAGACACGCTGAGTGCGCTGGCGATTCGCACATCCGCGCTGGCTTACTACAACCGTTTCGGCCAGCCG ATCTGGCACGAGCCGCGCGGGCTGGCCGCCGGGTACGACTGGCCGCAGTTCTCCATCCATCGCGGCGAATTCCAGATGAC CCTGGCCGATGCCGTGATTGAGCGGCTCGGTGCTGGTTGCATCCGTCTTGGTCACAGCTTCGAGGCGGTCCAATCGACGG GTGAGAAGGGCGGCCCCGTGCGCTTCACCCTGCGCGATCGCTCCAACGACACCGTGGTTGAATCCTCGGCAGACGTGCTG ATCGGCGCGGATGGCATCCACTCTGCCGTGCGCCGGCACTTCTACCCGACGGGCGATGCCCCACGTTTTGCGGGCCGCAT GCTGTGGCGCGCCGTCACCGACGCAGCGCCGTATCTCGATGGCCGCACCATGTTCATGGCAGGCCACCAGGACCAGAAGT TCGTTGCCTATCCGATCTCGGAACCACTGCGCCAGCAGGGCCGCTCACGCATCAACTGGATTGCCGAACTGCGCGTGCCC GACGAGGCGCCGCCACGCAGCGACTGGAACCGCGAGGTCGATCGCGCGATCTTCCGCAGCGCCTTCGCCGACTGGAAATG GGATTGGATCGACATCCCGGCCTTGATCGACGGTGCGCAAGCCGTGTACGAATTCCCGCTCGTCGACAAAGACCCGTTGC CACGCTGGACCTTCGGTCGCGTCACGCTGCTGGGCGATGCGGCGCACCCGATGTATCCGATCGGCTCGAACGGTAGCGCG CAGGCGATTCTCGATGCACGCGCGTTGGTCGATTGCCTGCTCGCCACGCGCGACACTGGCGTGGCGCTGCGTGAGTACGA GGCCGACCGCCTGCCGCGCACGGCCGGCATCGTGCTGCGCAATCGCCTCAATGGCCCGGAGCAGGTCATGCAACTCGCGC ATGAACGCGCACCCCAAGGCTTTGCGCGCATCGACGACGTGATCCCGCGCTCCGAGCTGGAAGGGATTGCGATGCGCTAT AAAAAGCTGGCCGGCTTCGATCCGCAATCGCTGCGCGATCAGCTGCCCATGCCCCGCCGCGCCTGA
Upstream 100 bases:
>100_bases CGCATTCAGCTGTCTTCATCTAAGTATTTGCCCTGATATGCCTCCGGCTGGCTGCCGTTGATATTCGTTATAGACTGCAA CAAATTTCAGGGAGACAGCC
Downstream 100 bases:
>100_bases AAAACCCGTAACGCATTCACACGCCAGAAGAGAAAAGGGGACCCCATGACCATCCGCCGCACCCTCTGCGCCGCCGCTGC GCTGTTGCTTGCCACCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MKIAVIGAGIGGLTLALMAERQGFEVEVWEAVQTLRPLGVGINLLPHAARQLCELGLEDTLSALAIRTSALAYYNRFGQP IWHEPRGLAAGYDWPQFSIHRGEFQMTLADAVIERLGAGCIRLGHSFEAVQSTGEKGGPVRFTLRDRSNDTVVESSADVL IGADGIHSAVRRHFYPTGDAPRFAGRMLWRAVTDAAPYLDGRTMFMAGHQDQKFVAYPISEPLRQQGRSRINWIAELRVP DEAPPRSDWNREVDRAIFRSAFADWKWDWIDIPALIDGAQAVYEFPLVDKDPLPRWTFGRVTLLGDAAHPMYPIGSNGSA QAILDARALVDCLLATRDTGVALREYEADRLPRTAGIVLRNRLNGPEQVMQLAHERAPQGFARIDDVIPRSELEGIAMRY KKLAGFDPQSLRDQLPMPRRA
Sequences:
>Translated_421_residues MKIAVIGAGIGGLTLALMAERQGFEVEVWEAVQTLRPLGVGINLLPHAARQLCELGLEDTLSALAIRTSALAYYNRFGQP IWHEPRGLAAGYDWPQFSIHRGEFQMTLADAVIERLGAGCIRLGHSFEAVQSTGEKGGPVRFTLRDRSNDTVVESSADVL IGADGIHSAVRRHFYPTGDAPRFAGRMLWRAVTDAAPYLDGRTMFMAGHQDQKFVAYPISEPLRQQGRSRINWIAELRVP DEAPPRSDWNREVDRAIFRSAFADWKWDWIDIPALIDGAQAVYEFPLVDKDPLPRWTFGRVTLLGDAAHPMYPIGSNGSA QAILDARALVDCLLATRDTGVALREYEADRLPRTAGIVLRNRLNGPEQVMQLAHERAPQGFARIDDVIPRSELEGIAMRY KKLAGFDPQSLRDQLPMPRRA >Mature_421_residues MKIAVIGAGIGGLTLALMAERQGFEVEVWEAVQTLRPLGVGINLLPHAARQLCELGLEDTLSALAIRTSALAYYNRFGQP IWHEPRGLAAGYDWPQFSIHRGEFQMTLADAVIERLGAGCIRLGHSFEAVQSTGEKGGPVRFTLRDRSNDTVVESSADVL IGADGIHSAVRRHFYPTGDAPRFAGRMLWRAVTDAAPYLDGRTMFMAGHQDQKFVAYPISEPLRQQGRSRINWIAELRVP DEAPPRSDWNREVDRAIFRSAFADWKWDWIDIPALIDGAQAVYEFPLVDKDPLPRWTFGRVTLLGDAAHPMYPIGSNGSA QAILDARALVDCLLATRDTGVALREYEADRLPRTAGIVLRNRLNGPEQVMQLAHERAPQGFARIDDVIPRSELEGIAMRY KKLAGFDPQSLRDQLPMPRRA
Specific function: Catalyzes the oxidative decarboxylation of 6- hydroxynicotinic acid to 2,5-dihydroxypyridine. Uses NADH in preference to NADPH as an electron donor [H]
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.114 [H]
Molecular weight: Translated: 46840; Mature: 46840
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAVIGAGIGGLTLALMAERQGFEVEVWEAVQTLRPLGVGINLLPHAARQLCELGLEDT CEEEEEECCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHH LSALAIRTSALAYYNRFGQPIWHEPRGLAAGYDWPQFSIHRGEFQMTLADAVIERLGAGC HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCEEHHHHHHHHHHHCCHH IRLGHSFEAVQSTGEKGGPVRFTLRDRSNDTVVESSADVLIGADGIHSAVRRHFYPTGDA HHHCCCHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCEEEECHHHHHHHHHHCCCCCCC PRFAGRMLWRAVTDAAPYLDGRTMFMAGHQDQKFVAYPISEPLRQQGRSRINWIAELRVP HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHEEEEEEECC DEAPPRSDWNREVDRAIFRSAFADWKWDWIDIPALIDGAQAVYEFPLVDKDPLPRWTFGR CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECHHHHCCCHHHEECCCCCCCCCCCCCCCE VTLLGDAAHPMYPIGSNGSAQAILDARALVDCLLATRDTGVALREYEADRLPRTAGIVLR EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHH NRLNGPEQVMQLAHERAPQGFARIDDVIPRSELEGIAMRYKKLAGFDPQSLRDQLPMPRR HCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC A C >Mature Secondary Structure MKIAVIGAGIGGLTLALMAERQGFEVEVWEAVQTLRPLGVGINLLPHAARQLCELGLEDT CEEEEEECCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHH LSALAIRTSALAYYNRFGQPIWHEPRGLAAGYDWPQFSIHRGEFQMTLADAVIERLGAGC HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCEEHHHHHHHHHHHCCHH IRLGHSFEAVQSTGEKGGPVRFTLRDRSNDTVVESSADVLIGADGIHSAVRRHFYPTGDA HHHCCCHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCEEEECHHHHHHHHHHCCCCCCC PRFAGRMLWRAVTDAAPYLDGRTMFMAGHQDQKFVAYPISEPLRQQGRSRINWIAELRVP HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHEEEEEEECC DEAPPRSDWNREVDRAIFRSAFADWKWDWIDIPALIDGAQAVYEFPLVDKDPLPRWTFGR CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECHHHHCCCHHHEECCCCCCCCCCCCCCCE VTLLGDAAHPMYPIGSNGSAQAILDARALVDCLLATRDTGVALREYEADRLPRTAGIVLR EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHH NRLNGPEQVMQLAHERAPQGFARIDDVIPRSELEGIAMRYKKLAGFDPQSLRDQLPMPRR HCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA