| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is ampG [H]
Identifier: 187927157
GI number: 187927157
Start: 59149
End: 60438
Strand: Direct
Name: ampG [H]
Synonym: Rpic_0047
Alternate gene names: 187927157
Gene position: 59149-60438 (Clockwise)
Preceding gene: 187927153
Following gene: 187927159
Centisome position: 1.5
GC content: 66.98
Gene sequence:
>1290_bases ATGACCTTCCACGATTACCTCGATATTTTTCGCAACCGCCGCATCGGCGCCATGTTGTTGCTGGGCTTTGCCTCCGGCCT GCCGCTGGCGCTCACCTCGGGCACGCTGCAGGCCTGGATGACGGTGGAAGGGCTGGATATCCGCACCATCGGGTTGTTCT CGCTGGTGGGGCAGGCGTACATCTTCAAGTTCCTGTGGGCGCCGCTGATGGACCGCTTCACACCGCCATTGATGGGCCGC CGGCGCGGCTGGCTGGTGCTGACGCAGGCCGGGCTGGTAGCGTCGATTGCGGCCATGGCCTTCACGCCGCCGCATGCCGC GCTCTGGGCGCTGGCTGGGCTGGCGGTGCTGGTGGCGTTTTTATCCGCGTCGCAGGACATCGTCTTCGATGCCTACAGCA CCGATGTGCTGCATACGAGCGAGCGCGGCGTCGGCGCGGCCGTGAAGGTGCTTGGCTACCGGCTGGCGATGCTGGTGTCG GGTGGCCTGGCGCTGTATCTGGCCGATCGCGTGATGGGCTGGAGCAACATGTATCTGCTGATGGCCGGGCTGATGGCGCT GGGCATCATCACGACGCTGTGGTCGCCCGAGCCGGAGGTGTCGGCTCGCCCACCGCGCAGCCTGCAGGAAGCCGTGGTGG GGCCGCTGCGAGACTTCTTCTCCCGCCGTGGCGCCTGGGCGCTGCTGGGGCTGATCGTGCTCTACAAGCTGGGCGACGCG TTTGCGGGCAGCCTGTCGACCACGTTCCTGATCCGCGGCGTCGGCTTTTCCGCCGGCGAGGTCGGCATCGTCAACAAGAC GCTCGGCTTGGCCGCCACCATCGTGGGCGCACTGTATGGCGGCACGCTGATGGTGCGGCTCGGGCTGGTGCGAGCGCTGC TGCTTTTTGGCGTGCTGCAGGCGGTGTCGAACCTGGGCTACTGGGTGCTGGCCGTGACGCCGCAGCACCTGTGGACGATG GCGGTGGCCATCGGCATCGAGAACATCTGCGGCGGCATGGGAACGGCGGCCTTTGTGGCGCTGCTGATGGCGCTGTGCAA CCGGTCGTTCTCGGCGACGCAGTATGCGTTGCTGTCAGCGCTGGCTTCCATCGGCCGCGTGTACGTTGGGCCCACCTCGG GCTACCTCGTGGAAGCCTACGGCTGGCCCGCGTTCTATCTGATGACCGTGGTGTTTGCCTTCCCGGGCCTTGCGCTGCTG TGGTGGATGCGCGGCACGATCGGCCGCTACGAAGCCGAGCAGAACGAACGCGCCTTGGAGGCCAAAGCGGCCAAGGCCGC GTCAGCCTGA
Upstream 100 bases:
>100_bases CATATAGGTGAGGGGACGGATCCGTGCGACATAATATCGGCCAACGCCGCGCGCCACGCTACGTGGCAACCCGCATTCGC CTTCGCCACCGGCCCGCCGC
Downstream 100 bases:
>100_bases TCGTCTAACCCAAGCGGTTCGAGCGGTCGGCATCGGCAAAGCCGGTCAGCGGCAGTGCTGCATCGATGCCTTTGCCCAGC GCGATGGCCTTGAACAGCTC
Product: muropeptide transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MTFHDYLDIFRNRRIGAMLLLGFASGLPLALTSGTLQAWMTVEGLDIRTIGLFSLVGQAYIFKFLWAPLMDRFTPPLMGR RRGWLVLTQAGLVASIAAMAFTPPHAALWALAGLAVLVAFLSASQDIVFDAYSTDVLHTSERGVGAAVKVLGYRLAMLVS GGLALYLADRVMGWSNMYLLMAGLMALGIITTLWSPEPEVSARPPRSLQEAVVGPLRDFFSRRGAWALLGLIVLYKLGDA FAGSLSTTFLIRGVGFSAGEVGIVNKTLGLAATIVGALYGGTLMVRLGLVRALLLFGVLQAVSNLGYWVLAVTPQHLWTM AVAIGIENICGGMGTAAFVALLMALCNRSFSATQYALLSALASIGRVYVGPTSGYLVEAYGWPAFYLMTVVFAFPGLALL WWMRGTIGRYEAEQNERALEAKAAKAASA
Sequences:
>Translated_429_residues MTFHDYLDIFRNRRIGAMLLLGFASGLPLALTSGTLQAWMTVEGLDIRTIGLFSLVGQAYIFKFLWAPLMDRFTPPLMGR RRGWLVLTQAGLVASIAAMAFTPPHAALWALAGLAVLVAFLSASQDIVFDAYSTDVLHTSERGVGAAVKVLGYRLAMLVS GGLALYLADRVMGWSNMYLLMAGLMALGIITTLWSPEPEVSARPPRSLQEAVVGPLRDFFSRRGAWALLGLIVLYKLGDA FAGSLSTTFLIRGVGFSAGEVGIVNKTLGLAATIVGALYGGTLMVRLGLVRALLLFGVLQAVSNLGYWVLAVTPQHLWTM AVAIGIENICGGMGTAAFVALLMALCNRSFSATQYALLSALASIGRVYVGPTSGYLVEAYGWPAFYLMTVVFAFPGLALL WWMRGTIGRYEAEQNERALEAKAAKAASA >Mature_428_residues TFHDYLDIFRNRRIGAMLLLGFASGLPLALTSGTLQAWMTVEGLDIRTIGLFSLVGQAYIFKFLWAPLMDRFTPPLMGRR RGWLVLTQAGLVASIAAMAFTPPHAALWALAGLAVLVAFLSASQDIVFDAYSTDVLHTSERGVGAAVKVLGYRLAMLVSG GLALYLADRVMGWSNMYLLMAGLMALGIITTLWSPEPEVSARPPRSLQEAVVGPLRDFFSRRGAWALLGLIVLYKLGDAF AGSLSTTFLIRGVGFSAGEVGIVNKTLGLAATIVGALYGGTLMVRLGLVRALLLFGVLQAVSNLGYWVLAVTPQHLWTMA VAIGIENICGGMGTAAFVALLMALCNRSFSATQYALLSALASIGRVYVGPTSGYLVEAYGWPAFYLMTVVFAFPGLALLW WMRGTIGRYEAEQNERALEAKAAKAASA
Specific function: Probably acts as a permease in the beta-lactamase induction system and in peptidoglycan recycling [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Homo sapiens, GI19923957, Length=405, Percent_Identity=28.641975308642, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI1786636, Length=411, Percent_Identity=65.9367396593674, Blast_Score=534, Evalue=1e-153,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004752 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45982; Mature: 45851
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFHDYLDIFRNRRIGAMLLLGFASGLPLALTSGTLQAWMTVEGLDIRTIGLFSLVGQAY CCHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHH IFKFLWAPLMDRFTPPLMGRRRGWLVLTQAGLVASIAAMAFTPPHAALWALAGLAVLVAF HHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LSASQDIVFDAYSTDVLHTSERGVGAAVKVLGYRLAMLVSGGLALYLADRVMGWSNMYLL HHCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHH MAGLMALGIITTLWSPEPEVSARPPRSLQEAVVGPLRDFFSRRGAWALLGLIVLYKLGDA HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FAGSLSTTFLIRGVGFSAGEVGIVNKTLGLAATIVGALYGGTLMVRLGLVRALLLFGVLQ HHCCHHHHHHEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVSNLGYWVLAVTPQHLWTMAVAIGIENICGGMGTAAFVALLMALCNRSFSATQYALLSA HHHCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH LASIGRVYVGPTSGYLVEAYGWPAFYLMTVVFAFPGLALLWWMRGTIGRYEAEQNERALE HHHHCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHH AKAAKAASA HHHHHHCCC >Mature Secondary Structure TFHDYLDIFRNRRIGAMLLLGFASGLPLALTSGTLQAWMTVEGLDIRTIGLFSLVGQAY CHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHH IFKFLWAPLMDRFTPPLMGRRRGWLVLTQAGLVASIAAMAFTPPHAALWALAGLAVLVAF HHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LSASQDIVFDAYSTDVLHTSERGVGAAVKVLGYRLAMLVSGGLALYLADRVMGWSNMYLL HHCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHH MAGLMALGIITTLWSPEPEVSARPPRSLQEAVVGPLRDFFSRRGAWALLGLIVLYKLGDA HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FAGSLSTTFLIRGVGFSAGEVGIVNKTLGLAATIVGALYGGTLMVRLGLVRALLLFGVLQ HHCCHHHHHHEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVSNLGYWVLAVTPQHLWTMAVAIGIENICGGMGTAAFVALLMALCNRSFSATQYALLSA HHHCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH LASIGRVYVGPTSGYLVEAYGWPAFYLMTVVFAFPGLALLWWMRGTIGRYEAEQNERALE HHHHCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHH AKAAKAASA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]