| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is lpxP [H]
Identifier: 187927147
GI number: 187927147
Start: 49343
End: 50191
Strand: Direct
Name: lpxP [H]
Synonym: Rpic_0037
Alternate gene names: 187927147
Gene position: 49343-50191 (Clockwise)
Preceding gene: 187927145
Following gene: 187927148
Centisome position: 1.25
GC content: 67.73
Gene sequence:
>849_bases ATGACCTTCCTGTTCTGGCTGTTTTCACGCTTGCCCCTATCCGCGCTGCAGGCGCTGGGCGGCTGGCTGGGGGCGCTGGC GGCCAAGGTGCCCGGCCGCTATCACGACCGGCTCATTGCCAACTTCCGCCACGCCTATCCCGACGTCACGCCCGCCATGC TCAAGGAGGCTGGGCGATCCGCCGGCCGCATGGTGTTCGAGATGCCCTACTTCTGGGTGCGCAAGAACGGGGCGGACGTC GCCCCTCACCTGTTCGACGTGTGCCGGACGGTCGTCGAGCGCGCGCTTGCAGATGGGCGCGGCCTGATCTTCCTGACGCC GCACCTGGGCTGCTTTGAAGTGCTGCCGCAGGCCTATGCGCGTGAGCACCCCGTCACCTCGCTGTTCAAGCCGCCGCGCA AGGCAAGCCTGCGCGGCTGGATTGAAACCATGCGGGCGGGACCGAACATGCAGATGGCACCGGCAGACCCGCGTGGCGTG CGCATGCTGGTGCGCGCACTCAAGCGCGGCGAGGCCGTCGGCATCCTGCCCGACCAGACCCCCACCGCCGGCGAGGGCGT ATGGGCGCCGTTCTTCGGCAAGCCCGCCTATACGATGACGCTGGTGCACCGTTTGCATCGGCTCACGGGTGCACCCGTCG TGGCATTGTTTGCCGAACGGCTGCCGCGCGGCGCAGGCTATCGCCTGCACTTGGAGGAGATTGGCGATCTGCCCGAAGAC GCAACGCAGGCCGCCACCCGCATCAATGCCGCCGTCGAACGGTTGATTGCCGTGGCGCCGACGCAATATCTCTGGGGCTA TAACCGCTACAAGCATCCCAAGGGCGCGGACGCTCCGCCCGCTGCCTGA
Upstream 100 bases:
>100_bases ATCGCGTTATTATACGCGGCACTTTTCGGGGCCGCAGCAAGGCCTGTCAAGACCCTGCTCCCCTGTCGACTGCGACCAAC ACATTGCTGCGACCGCACGC
Downstream 100 bases:
>100_bases CACTGCTGCCTTTATGGAACGTCTCTCTGCCAAACTCGGACTCGGCTTCTTGTGGCTGCTGTCCTTCCTGCCGTACGGCT TTGTCGCGCGTTTTGGCGAA
Product: lipid A biosynthesis lauroyl acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTFLFWLFSRLPLSALQALGGWLGALAAKVPGRYHDRLIANFRHAYPDVTPAMLKEAGRSAGRMVFEMPYFWVRKNGADV APHLFDVCRTVVERALADGRGLIFLTPHLGCFEVLPQAYAREHPVTSLFKPPRKASLRGWIETMRAGPNMQMAPADPRGV RMLVRALKRGEAVGILPDQTPTAGEGVWAPFFGKPAYTMTLVHRLHRLTGAPVVALFAERLPRGAGYRLHLEEIGDLPED ATQAATRINAAVERLIAVAPTQYLWGYNRYKHPKGADAPPAA
Sequences:
>Translated_282_residues MTFLFWLFSRLPLSALQALGGWLGALAAKVPGRYHDRLIANFRHAYPDVTPAMLKEAGRSAGRMVFEMPYFWVRKNGADV APHLFDVCRTVVERALADGRGLIFLTPHLGCFEVLPQAYAREHPVTSLFKPPRKASLRGWIETMRAGPNMQMAPADPRGV RMLVRALKRGEAVGILPDQTPTAGEGVWAPFFGKPAYTMTLVHRLHRLTGAPVVALFAERLPRGAGYRLHLEEIGDLPED ATQAATRINAAVERLIAVAPTQYLWGYNRYKHPKGADAPPAA >Mature_281_residues TFLFWLFSRLPLSALQALGGWLGALAAKVPGRYHDRLIANFRHAYPDVTPAMLKEAGRSAGRMVFEMPYFWVRKNGADVA PHLFDVCRTVVERALADGRGLIFLTPHLGCFEVLPQAYAREHPVTSLFKPPRKASLRGWIETMRAGPNMQMAPADPRGVR MLVRALKRGEAVGILPDQTPTAGEGVWAPFFGKPAYTMTLVHRLHRLTGAPVVALFAERLPRGAGYRLHLEEIGDLPEDA TQAATRINAAVERLIAVAPTQYLWGYNRYKHPKGADAPPAA
Specific function: Unknown
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
Organism=Escherichia coli, GI87082094, Length=281, Percent_Identity=30.2491103202847, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1787292, Length=291, Percent_Identity=27.1477663230241, Blast_Score=90, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 - InterPro: IPR011920 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.-
Molecular weight: Translated: 31197; Mature: 31066
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLFWLFSRLPLSALQALGGWLGALAAKVPGRYHDRLIANFRHAYPDVTPAMLKEAGRS CHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH AGRMVFEMPYFWVRKNGADVAPHLFDVCRTVVERALADGRGLIFLTPHLGCFEVLPQAYA HCCEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH REHPVTSLFKPPRKASLRGWIETMRAGPNMQMAPADPRGVRMLVRALKRGEAVGILPDQT HCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCC PTAGEGVWAPFFGKPAYTMTLVHRLHRLTGAPVVALFAERLPRGAGYRLHLEEIGDLPED CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEHHHHCCCCHH ATQAATRINAAVERLIAVAPTQYLWGYNRYKHPKGADAPPAA HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TFLFWLFSRLPLSALQALGGWLGALAAKVPGRYHDRLIANFRHAYPDVTPAMLKEAGRS HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH AGRMVFEMPYFWVRKNGADVAPHLFDVCRTVVERALADGRGLIFLTPHLGCFEVLPQAYA HCCEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH REHPVTSLFKPPRKASLRGWIETMRAGPNMQMAPADPRGVRMLVRALKRGEAVGILPDQT HCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCC PTAGEGVWAPFFGKPAYTMTLVHRLHRLTGAPVVALFAERLPRGAGYRLHLEEIGDLPED CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEHHHHCCCCHH ATQAATRINAAVERLIAVAPTQYLWGYNRYKHPKGADAPPAA HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]