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The map label for this gene is 187927145

Identifier: 187927145

GI number: 187927145

Start: 47549

End: 47842

Strand: Direct

Name: 187927145

Synonym: Rpic_0035

Alternate gene names: NA

Gene position: 47549-47842 (Clockwise)

Preceding gene: 187927143

Following gene: 187927147

Centisome position: 1.21

GC content: 64.63

Gene sequence:

>294_bases
ATGGCAACTTTTCTGGCCCTGCTGAACTTTACCGACCAGGGCATCCGCAGCGTGAAAGACACCACCAAGCGGGCGGCTGC
GGCCCGCGAACTGGCCAAGGCGGCCGGCATCGACATGAAGGCGATCTACTGGACGCTGGGCCAGTACGACCTCGCCGTGA
TCTGCGAGGGCCCGGACGATGCCGCCATGACGGCCTTCGGGCTGGCGCTGGCCGCGGCGGGCAATGTCCGTTCGCAGACG
CTGAGGGCGTTTTCCGCAGATGAGATGAACGGCATTCTCAGCAAGATGCCGTGA

Upstream 100 bases:

>100_bases
CAGCTTGCCTGGCGTGCACATTGCACGAAAGCGCCTCCCGCGCGTTTCGGCGGCGCGCGATGCGGCTTCCCTCCGACTCC
CGCCGATCAGGAGATGCACC

Downstream 100 bases:

>100_bases
GCGCGGTATTACCAAGCACGCAACAAAAAACCGCCCCGAGAGGCGGTTTCTTGTCTGCAGCAGGGTGGCCTCAGGCAAAC
GCCTTGGCCGGCTCGCCGGC

Product: GYD family protein

Products: NA

Alternate protein names: GYD Domain Protein

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MATFLALLNFTDQGIRSVKDTTKRAAAARELAKAAGIDMKAIYWTLGQYDLAVICEGPDDAAMTAFGLALAAAGNVRSQT
LRAFSADEMNGILSKMP

Sequences:

>Translated_97_residues
MATFLALLNFTDQGIRSVKDTTKRAAAARELAKAAGIDMKAIYWTLGQYDLAVICEGPDDAAMTAFGLALAAAGNVRSQT
LRAFSADEMNGILSKMP
>Mature_96_residues
ATFLALLNFTDQGIRSVKDTTKRAAAARELAKAAGIDMKAIYWTLGQYDLAVICEGPDDAAMTAFGLALAAAGNVRSQTL
RAFSADEMNGILSKMP

Specific function: Unknown

COG id: COG4274

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10286; Mature: 10155

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATFLALLNFTDQGIRSVKDTTKRAAAARELAKAAGIDMKAIYWTLGQYDLAVICEGPDD
CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCEEEEECCCCC
AAMTAFGLALAAAGNVRSQTLRAFSADEMNGILSKMP
HHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHCCC
>Mature Secondary Structure 
ATFLALLNFTDQGIRSVKDTTKRAAAARELAKAAGIDMKAIYWTLGQYDLAVICEGPDD
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCEEEEECCCCC
AAMTAFGLALAAAGNVRSQTLRAFSADEMNGILSKMP
HHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA