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The map label for this gene is fhaC [H]

Identifier: 187927124

GI number: 187927124

Start: 25869

End: 27560

Strand: Direct

Name: fhaC [H]

Synonym: Rpic_0014

Alternate gene names: 187927124

Gene position: 25869-27560 (Clockwise)

Preceding gene: 187927122

Following gene: 187927126

Centisome position: 0.66

GC content: 62.0

Gene sequence:

>1692_bases
ATGCGGACAACGTTTCTATTGCGCACGCTGCTAGCGAGCGGCATGACTTCTTCTGTTTTCGCGCAAGTCGCGCCTGCACC
CCTCACCGGCCCTGGTCCCGACGTGCAGCGCTTGCAAGAGCAGCAAGCCGAGCAGGCGCGCGAGCGTGCCAACGCCCGCC
CGGATGTCTTCACGCCACCCGCACCCGCGCAGGTGATTTCGCTGTCCGCGCTGCCGAAGGAAACGCCATGCTTCCAAATC
AACGGCATCACGTTGGAGGACAACGTCTTCTGGTGGTTGCCCGACCTGCTCAAGCCCGTCAATGGCCAGTGTGTCGGCAA
GCAGGGGCTGGAGGCGATCGAGCTGCAGGCAAACAACGCGCTGATTGAGCGGGGCTACGTCACTTCGCGGGTCCTGATCC
CGAAGCAGAACTTGGCTGGCGGTACGTTGCAACTCAAGGTGTTGGCGGGGCGCATTGGGGCCATCCGAAATGCCTCGGAT
AACAACATCGGCTGGGCACGGATGGTGTTGCTCGCTGGCCCCGGAGATTTGTTGAACCAGCGCGACTTGGACCAGGCGCT
GGAAAGCATTCGCCGCCTGCCGGGTCAGTCGCAGACAAGCTTTGACATCGTTCCTGGCGAGCGCGTCGGTGAATCTGACA
TCGTGCTCAAGCCGGGTACTGACAAGCGCTGGCACGCATCGCTGTCAGCGGATAACACGGGCTTGAAGTCGACCGGCAAG
TACCAGATGAGCGGCTCGCTGGTCATCGACTCGCCGCTGCACCTCTACGACCAACTGTCGATTTCAGCGTCGTCCAATAC
AGACCGCGGTTCGACCGCAGCAGGCACGCGTTCCTATTCCATCAACTGGAGCGTGCCGGTCGGCTATGCCACGCTCTTCG
TCGGCGCCAATCGCTCGCGCTACAACCAGACGGTGGCGGGTTTCGAGGAGCCCATCGTCTACAGCGGCAATAGCTCGGAG
GTGAATGCCGGCATCAGTGGCGTGCTGCATCGCGACGCGACGTCGCGCACCGGCGCCCAGTTCAAGCTCTTCCGCAAAAT
CAACCGCAACTACCTGGAAGACACGGAGATTGCGGTCCAGCGTCGTGACGTCGTGGGCTATGAGGCGTCGATGTCGCATC
GCCATTATCTCGGCCCGGTGGTGCTCGATGGCGGGTTTGCGTGGCGAGAGACGCTGCCCGACCATTCCAACGTGCCGGGC
GTGGTGGTCGGTGACCCTGGCTACGGCGGGCGCTCACAAGTTGAAACGGCCAACGCAAGCCTGTATTGGCCGTTCAAGCT
GGCTAACCAGATGTTCGAGTACACGAGCAACTGGTCTATCCAGCACGCTCGCACACGTGTGCTGCCCAGCGACTACTTCA
CCATCGGTAACCGCTACACCGTGCGCGGCTTCGACGGTCAATTGACGCTGGCGGCTGAAGACGGATGGTTCTGGCGCAAT
GAACTGGCATGGCGCGTTGCAGGACAGGCCATCTATGCCGGGGTCGATATGGGCAAGGTGCACGGCCCCAGTGCGGAATT
TCTGCTCGGCGACAAGTTGGTGGGTGCCGTCGTTGGTGTGCGAGGGCGCGTGCCATCCGGGCCCTACATGGCCTTCAACT
ACGACGTGTCGTTTGGTTGGCCGTTGTACAGACCAGCCGGCTTCCGCAGCCAACAGCCAGCAGTGATGGCGCAGGTTGGC
GTGGAGTTTTAG

Upstream 100 bases:

>100_bases
AAGCGACGTAGCGCTTAGGAAAGTTGATTGATTCGGGGGTATTTCCCCATTGGAGGCGCTCATAGTTGGCGTCTTTACTC
CCCCAATTTCTTGTTGAGTG

Downstream 100 bases:

>100_bases
CTTCCAGCTTCATCGAGGAGCATCAATGGGTTGCGGCTGCGCGCTGCATAAGGGCGATAGCCGCAACAGAGCGAGCAGCG
CTAGCGTCGGTGTGCAACTG

Product: Polypeptide-transport-associated domain-containing protein ShlB-type

Products: NA

Alternate protein names: TpsB transporter [H]

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MRTTFLLRTLLASGMTSSVFAQVAPAPLTGPGPDVQRLQEQQAEQARERANARPDVFTPPAPAQVISLSALPKETPCFQI
NGITLEDNVFWWLPDLLKPVNGQCVGKQGLEAIELQANNALIERGYVTSRVLIPKQNLAGGTLQLKVLAGRIGAIRNASD
NNIGWARMVLLAGPGDLLNQRDLDQALESIRRLPGQSQTSFDIVPGERVGESDIVLKPGTDKRWHASLSADNTGLKSTGK
YQMSGSLVIDSPLHLYDQLSISASSNTDRGSTAAGTRSYSINWSVPVGYATLFVGANRSRYNQTVAGFEEPIVYSGNSSE
VNAGISGVLHRDATSRTGAQFKLFRKINRNYLEDTEIAVQRRDVVGYEASMSHRHYLGPVVLDGGFAWRETLPDHSNVPG
VVVGDPGYGGRSQVETANASLYWPFKLANQMFEYTSNWSIQHARTRVLPSDYFTIGNRYTVRGFDGQLTLAAEDGWFWRN
ELAWRVAGQAIYAGVDMGKVHGPSAEFLLGDKLVGAVVGVRGRVPSGPYMAFNYDVSFGWPLYRPAGFRSQQPAVMAQVG
VEF

Sequences:

>Translated_563_residues
MRTTFLLRTLLASGMTSSVFAQVAPAPLTGPGPDVQRLQEQQAEQARERANARPDVFTPPAPAQVISLSALPKETPCFQI
NGITLEDNVFWWLPDLLKPVNGQCVGKQGLEAIELQANNALIERGYVTSRVLIPKQNLAGGTLQLKVLAGRIGAIRNASD
NNIGWARMVLLAGPGDLLNQRDLDQALESIRRLPGQSQTSFDIVPGERVGESDIVLKPGTDKRWHASLSADNTGLKSTGK
YQMSGSLVIDSPLHLYDQLSISASSNTDRGSTAAGTRSYSINWSVPVGYATLFVGANRSRYNQTVAGFEEPIVYSGNSSE
VNAGISGVLHRDATSRTGAQFKLFRKINRNYLEDTEIAVQRRDVVGYEASMSHRHYLGPVVLDGGFAWRETLPDHSNVPG
VVVGDPGYGGRSQVETANASLYWPFKLANQMFEYTSNWSIQHARTRVLPSDYFTIGNRYTVRGFDGQLTLAAEDGWFWRN
ELAWRVAGQAIYAGVDMGKVHGPSAEFLLGDKLVGAVVGVRGRVPSGPYMAFNYDVSFGWPLYRPAGFRSQQPAVMAQVG
VEF
>Mature_563_residues
MRTTFLLRTLLASGMTSSVFAQVAPAPLTGPGPDVQRLQEQQAEQARERANARPDVFTPPAPAQVISLSALPKETPCFQI
NGITLEDNVFWWLPDLLKPVNGQCVGKQGLEAIELQANNALIERGYVTSRVLIPKQNLAGGTLQLKVLAGRIGAIRNASD
NNIGWARMVLLAGPGDLLNQRDLDQALESIRRLPGQSQTSFDIVPGERVGESDIVLKPGTDKRWHASLSADNTGLKSTGK
YQMSGSLVIDSPLHLYDQLSISASSNTDRGSTAAGTRSYSINWSVPVGYATLFVGANRSRYNQTVAGFEEPIVYSGNSSE
VNAGISGVLHRDATSRTGAQFKLFRKINRNYLEDTEIAVQRRDVVGYEASMSHRHYLGPVVLDGGFAWRETLPDHSNVPG
VVVGDPGYGGRSQVETANASLYWPFKLANQMFEYTSNWSIQHARTRVLPSDYFTIGNRYTVRGFDGQLTLAAEDGWFWRN
ELAWRVAGQAIYAGVDMGKVHGPSAEFLLGDKLVGAVVGVRGRVPSGPYMAFNYDVSFGWPLYRPAGFRSQQPAVMAQVG
VEF

Specific function: Member of a two partner secretion pathway (TPS) in which it mediates the secretion of filamentous hemagglutinin (FHA) [H]

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tpsB (TC 1.B.20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005565
- InterPro:   IPR013686 [H]

Pfam domain/function: PF08479 POTRA_2; PF03865 ShlB [H]

EC number: NA

Molecular weight: Translated: 61469; Mature: 61469

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTTFLLRTLLASGMTSSVFAQVAPAPLTGPGPDVQRLQEQQAEQARERANARPDVFTPP
CCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
APAQVISLSALPKETPCFQINGITLEDNVFWWLPDLLKPVNGQCVGKQGLEAIELQANNA
CCHHEEEEECCCCCCCCEEEECEEEECCEEEECHHHCCCCCCEEECCCCCEEEEEECCCE
LIERGYVTSRVLIPKQNLAGGTLQLKVLAGRIGAIRNASDNNIGWARMVLLAGPGDLLNQ
EEECCCEEEEEEECCCCCCCCEEEEEEEECCHHHCCCCCCCCCCEEEEEEEECCHHHCCH
RDLDQALESIRRLPGQSQTSFDIVPGERVGESDIVLKPGTDKRWHASLSADNTGLKSTGK
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCC
YQMSGSLVIDSPLHLYDQLSISASSNTDRGSTAAGTRSYSINWSVPVGYATLFVGANRSR
EEECCCEEECCCHHEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCHH
YNQTVAGFEEPIVYSGNSSEVNAGISGVLHRDATSRTGAQFKLFRKINRNYLEDTEIAVQ
HHHHHCCCCCCEEECCCCCCCCCCHHEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHEE
RRDVVGYEASMSHRHYLGPVVLDGGFAWRETLPDHSNVPGVVVGDPGYGGRSQVETANAS
HHHEECEECCCCCCEECCCEEEECCEEHHHCCCCCCCCCEEEECCCCCCCCCCEEECCCE
LYWPFKLANQMFEYTSNWSIQHARTRVLPSDYFTIGNRYTVRGFDGQLTLAAEDGWFWRN
EEEHHHHHHHHHHHHCCCCEEHHHHCCCCCCCEECCCEEEEEECCCEEEEEECCCCEECC
ELAWRVAGQAIYAGVDMGKVHGPSAEFLLGDKLVGAVVGVRGRVPSGPYMAFNYDVSFGW
CCEEEEECCEEEECCCCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCEEEEEEEEECCC
PLYRPAGFRSQQPAVMAQVGVEF
CCCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MRTTFLLRTLLASGMTSSVFAQVAPAPLTGPGPDVQRLQEQQAEQARERANARPDVFTPP
CCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
APAQVISLSALPKETPCFQINGITLEDNVFWWLPDLLKPVNGQCVGKQGLEAIELQANNA
CCHHEEEEECCCCCCCCEEEECEEEECCEEEECHHHCCCCCCEEECCCCCEEEEEECCCE
LIERGYVTSRVLIPKQNLAGGTLQLKVLAGRIGAIRNASDNNIGWARMVLLAGPGDLLNQ
EEECCCEEEEEEECCCCCCCCEEEEEEEECCHHHCCCCCCCCCCEEEEEEEECCHHHCCH
RDLDQALESIRRLPGQSQTSFDIVPGERVGESDIVLKPGTDKRWHASLSADNTGLKSTGK
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCC
YQMSGSLVIDSPLHLYDQLSISASSNTDRGSTAAGTRSYSINWSVPVGYATLFVGANRSR
EEECCCEEECCCHHEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCHH
YNQTVAGFEEPIVYSGNSSEVNAGISGVLHRDATSRTGAQFKLFRKINRNYLEDTEIAVQ
HHHHHCCCCCCEEECCCCCCCCCCHHEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHEE
RRDVVGYEASMSHRHYLGPVVLDGGFAWRETLPDHSNVPGVVVGDPGYGGRSQVETANAS
HHHEECEECCCCCCEECCCEEEECCEEHHHCCCCCCCCCEEEECCCCCCCCCCEEECCCE
LYWPFKLANQMFEYTSNWSIQHARTRVLPSDYFTIGNRYTVRGFDGQLTLAAEDGWFWRN
EEEHHHHHHHHHHHHCCCCEEHHHHCCCCCCCEECCCEEEEEECCCEEEEEECCCCEECC
ELAWRVAGQAIYAGVDMGKVHGPSAEFLLGDKLVGAVVGVRGRVPSGPYMAFNYDVSFGW
CCEEEEECCEEEECCCCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCEEEEEEEEECCC
PLYRPAGFRSQQPAVMAQVGVEF
CCCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]