| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is yjbB [H]
Identifier: 187935756
GI number: 187935756
Start: 1082656
End: 1084257
Strand: Reverse
Name: yjbB [H]
Synonym: CLL_A1058
Alternate gene names: 187935756
Gene position: 1084257-1082656 (Counterclockwise)
Preceding gene: 187934145
Following gene: 187935736
Centisome position: 28.53
GC content: 29.4
Gene sequence:
>1602_bases GTGAATGGTATAAATATGCTTATTGAATTAATTGGGGGTCTAGGGCTATTTCTCTTTGGTATGAAACTCATGGGAGACGG GCTTGAAAACGTTGCAGGTGAAAAATTAAAAAGTATTTTAGAAAAAGTAACAAATAATAAATACATGGGAGTTTTTATTG GAGCTCTTGTAACTGCTGTAATCCAAAGTTCTAGTGCTACAACAGTAATGGTTGTTAGCTTTGTAAATGCCGGTCTTATA AATCTTATGCAGGCTACTGGCGTTATAATGGGTGCAAATGTCGGAACAACTATAACAGCACAATTAATTTCTTGTAAATT AGATAATATTGCACCTTTATTTGTAGGCATAGGTTCAATTTCACTGTTAATAACAAGCAAGAAAAAACATCGAGATGTAT CTTCCATAATATTAGGATTTGGTATATTGTTTCTTGGAATGAATTTTATGTCTAGTGCTATGAAACCGTTAGCTGAATCA GAAATCTTTTCTCAAGTTTTAGTTTTAATTGGCAACAATAAGCTTTTAGGAGTTTTATGTGGACTTTTAATGACTGCAGT AGTACAGAGTTCTTCTGCTACAACTGGTATATTAATAGCACTTGCTACAACTGGAGCTATTGATATGAATGTTGCATTAC CTGTTATATTTGGATGTAATATTGGAACTTGTGTTACAGCACTTTTAGCATCTGCTGGTGGAAATAAAACTGCTAAAAAA GCTGGATTAATACATCTCTTTTTTAACGTTATAGGTGTGTTAATGTTTATTCCATTTGTAAATCCACTAATTTCATTTAT AAAAACTATTAATCCTACAGATGTTGCTAGACAAGTTGCAAATGCTCATACTATTTTTAATATTACTAGTACTATAATTT TGCTTCCTTTGTCAAAATATCTTGTTTTGTTAGCAAATAAACTATTACCAGGCAATGATTCTTTAGAAACAGAAGGAGCA ATTTATTTAGATAAAAATTTGCTAGATACCCCTATTGTAGCTACTGGACAAGTTGTTAATGAAACAATTAGAATGGGTAA AATTGCACAAAAAAACATAGAATTAGCTATGAAGGCTTTTTTAATTGAAAATGAAGAATACATAAAGCAAGTATATAGTA ATGAAAAAATAATAAATACTTTAGAAAAAGAGATAACAGATTATTTAGTTCTATTATCAAATTATGAATTGCCAGATACT GATAGTAAAATTTTAAGTACAAGCTTTCACATAATTAATGACATAGAGAGAATTGGTGATCATGCAAAAAATATAGTAGA ATTGGCTACTGAAAAAATTGATGATCATATTATAATCCCACAAGATGCTATTGAAGAACTTCTGAGTATGTATGAACAAA CTCTTAATGCTTTAACCTTAGCTTTAAAATGTTATGAAAATAGCGATTATACTAACGCTAAACATGTAAAGGAAATTGAA TTGAAAATAGATACTTGTGAAAAAACTCTTAGAGAAAGTAATATAAAAAGATTAAATCAGAAAAAATGTTCAGCCAACTC TAGTACAATATTTTTAGATCTAATTAGTAATCTTGAAAGAATTGGTGATCACTCTACTAATATTGCAGAAAGAGTACTTT AA
Upstream 100 bases:
>100_bases AATTCCAGAATTTATTTTTAATTTTACTTTTACTTTATTAAAAGATATAATATGTAAATGTAAAAACATAATTACTTTTT TATTCGAAGGAGAGATATGT
Downstream 100 bases:
>100_bases TATTTATTATAAAATAACATTCTATTAATATACAATAATTTGAAATTTCTATACTTTTAGTTTATAAATTACTATGATAT ACTATTTAAGTATTTTTACT
Product: Na/Pi-cotransporter family protein/PhoU family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MNGINMLIELIGGLGLFLFGMKLMGDGLENVAGEKLKSILEKVTNNKYMGVFIGALVTAVIQSSSATTVMVVSFVNAGLI NLMQATGVIMGANVGTTITAQLISCKLDNIAPLFVGIGSISLLITSKKKHRDVSSIILGFGILFLGMNFMSSAMKPLAES EIFSQVLVLIGNNKLLGVLCGLLMTAVVQSSSATTGILIALATTGAIDMNVALPVIFGCNIGTCVTALLASAGGNKTAKK AGLIHLFFNVIGVLMFIPFVNPLISFIKTINPTDVARQVANAHTIFNITSTIILLPLSKYLVLLANKLLPGNDSLETEGA IYLDKNLLDTPIVATGQVVNETIRMGKIAQKNIELAMKAFLIENEEYIKQVYSNEKIINTLEKEITDYLVLLSNYELPDT DSKILSTSFHIINDIERIGDHAKNIVELATEKIDDHIIIPQDAIEELLSMYEQTLNALTLALKCYENSDYTNAKHVKEIE LKIDTCEKTLRESNIKRLNQKKCSANSSTIFLDLISNLERIGDHSTNIAERVL
Sequences:
>Translated_533_residues MNGINMLIELIGGLGLFLFGMKLMGDGLENVAGEKLKSILEKVTNNKYMGVFIGALVTAVIQSSSATTVMVVSFVNAGLI NLMQATGVIMGANVGTTITAQLISCKLDNIAPLFVGIGSISLLITSKKKHRDVSSIILGFGILFLGMNFMSSAMKPLAES EIFSQVLVLIGNNKLLGVLCGLLMTAVVQSSSATTGILIALATTGAIDMNVALPVIFGCNIGTCVTALLASAGGNKTAKK AGLIHLFFNVIGVLMFIPFVNPLISFIKTINPTDVARQVANAHTIFNITSTIILLPLSKYLVLLANKLLPGNDSLETEGA IYLDKNLLDTPIVATGQVVNETIRMGKIAQKNIELAMKAFLIENEEYIKQVYSNEKIINTLEKEITDYLVLLSNYELPDT DSKILSTSFHIINDIERIGDHAKNIVELATEKIDDHIIIPQDAIEELLSMYEQTLNALTLALKCYENSDYTNAKHVKEIE LKIDTCEKTLRESNIKRLNQKKCSANSSTIFLDLISNLERIGDHSTNIAERVL >Mature_533_residues MNGINMLIELIGGLGLFLFGMKLMGDGLENVAGEKLKSILEKVTNNKYMGVFIGALVTAVIQSSSATTVMVVSFVNAGLI NLMQATGVIMGANVGTTITAQLISCKLDNIAPLFVGIGSISLLITSKKKHRDVSSIILGFGILFLGMNFMSSAMKPLAES EIFSQVLVLIGNNKLLGVLCGLLMTAVVQSSSATTGILIALATTGAIDMNVALPVIFGCNIGTCVTALLASAGGNKTAKK AGLIHLFFNVIGVLMFIPFVNPLISFIKTINPTDVARQVANAHTIFNITSTIILLPLSKYLVLLANKLLPGNDSLETEGA IYLDKNLLDTPIVATGQVVNETIRMGKIAQKNIELAMKAFLIENEEYIKQVYSNEKIINTLEKEITDYLVLLSNYELPDT DSKILSTSFHIINDIERIGDHAKNIVELATEKIDDHIIIPQDAIEELLSMYEQTLNALTLALKCYENSDYTNAKHVKEIE LKIDTCEKTLRESNIKRLNQKKCSANSSTIFLDLISNLERIGDHSTNIAERVL
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqeW [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=535, Percent_Identity=25.7943925233645, Blast_Score=177, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 57786; Mature: 57786
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGINMLIELIGGLGLFLFGMKLMGDGLENVAGEKLKSILEKVTNNKYMGVFIGALVTAV CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH IQSSSATTVMVVSFVNAGLINLMQATGVIMGANVGTTITAQLISCKLDNIAPLFVGIGSI HHCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCE SLLITSKKKHRDVSSIILGFGILFLGMNFMSSAMKPLAESEIFSQVLVLIGNNKLLGVLC EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GLLMTAVVQSSSATTGILIALATTGAIDMNVALPVIFGCNIGTCVTALLASAGGNKTAKK HHHHHHHHHCCCCCCEEEEEEECCCCEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCHHHH AGLIHLFFNVIGVLMFIPFVNPLISFIKTINPTDVARQVANAHTIFNITSTIILLPLSKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLLANKLLPGNDSLETEGAIYLDKNLLDTPIVATGQVVNETIRMGKIAQKNIELAMKAF HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LIENEEYIKQVYSNEKIINTLEKEITDYLVLLSNYELPDTDSKILSTSFHIINDIERIGD HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH HAKNIVELATEKIDDHIIIPQDAIEELLSMYEQTLNALTLALKCYENSDYTNAKHVKEIE HHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LKIDTCEKTLRESNIKRLNQKKCSANSSTIFLDLISNLERIGDHSTNIAERVL EEHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCHHHHHCC >Mature Secondary Structure MNGINMLIELIGGLGLFLFGMKLMGDGLENVAGEKLKSILEKVTNNKYMGVFIGALVTAV CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH IQSSSATTVMVVSFVNAGLINLMQATGVIMGANVGTTITAQLISCKLDNIAPLFVGIGSI HHCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCE SLLITSKKKHRDVSSIILGFGILFLGMNFMSSAMKPLAESEIFSQVLVLIGNNKLLGVLC EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GLLMTAVVQSSSATTGILIALATTGAIDMNVALPVIFGCNIGTCVTALLASAGGNKTAKK HHHHHHHHHCCCCCCEEEEEEECCCCEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCHHHH AGLIHLFFNVIGVLMFIPFVNPLISFIKTINPTDVARQVANAHTIFNITSTIILLPLSKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLLANKLLPGNDSLETEGAIYLDKNLLDTPIVATGQVVNETIRMGKIAQKNIELAMKAF HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LIENEEYIKQVYSNEKIINTLEKEITDYLVLLSNYELPDTDSKILSTSFHIINDIERIGD HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH HAKNIVELATEKIDDHIIIPQDAIEELLSMYEQTLNALTLALKCYENSDYTNAKHVKEIE HHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LKIDTCEKTLRESNIKRLNQKKCSANSSTIFLDLISNLERIGDHSTNIAERVL EEHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]