Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is celD [H]

Identifier: 187935639

GI number: 187935639

Start: 2189492

End: 2189794

Strand: Reverse

Name: celD [H]

Synonym: CLL_A2093

Alternate gene names: 187935639

Gene position: 2189794-2189492 (Counterclockwise)

Preceding gene: 187932855

Following gene: 187934839

Centisome position: 57.62

GC content: 28.71

Gene sequence:

>303_bases
ATGGAAGAAAAAATATTTGAAATAATATCACACAGTGGAGATTCAAGAGGATACACTTTTCAAGCTTTAAAAGAGGCAAG
AAAAAACAATATGGAAGAAGCAGAAAAACTTATGGATAAAGCAAATGAGGAATTACATTTAGCACATAATACTCAAACGT
CTCTTATTCAATGGGAGATAAATGGAAAACCAGTGGAAATATCACTACTTATGGTTCATGCACAAGATCAATTAATGACA
GCAATTTCTGAAAATAATTTAGTTAAAGAGTTGATTGAAATGTTTAAACTTATTCATAAATAA

Upstream 100 bases:

>100_bases
ATCTATTGATAAGTCAATAAAATTAGTTAATGAATTAATAGAAATAAATAAATGTTATTTACCACAGTTTAAATAAAAAA
TAACCAAGGAGGAATTTTAA

Downstream 100 bases:

>100_bases
ATTTTATATAATAACTAAAATATAGAGGTTAAATTGGGGGAATTTAATAAAATGAAAATATTAATACAGTTAGCATATAT
AATCTTTATAATTATGTTCA

Product: PTS system, Lactose/Cellobiose specific IIA subunit

Products: protein histidine; sugar phosphate

Alternate protein names: EIIA-Cel; EIII-Cel; PTS system cellobiose-specific EIIA component [H]

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MEEKIFEIISHSGDSRGYTFQALKEARKNNMEEAEKLMDKANEELHLAHNTQTSLIQWEINGKPVEISLLMVHAQDQLMT
AISENNLVKELIEMFKLIHK

Sequences:

>Translated_100_residues
MEEKIFEIISHSGDSRGYTFQALKEARKNNMEEAEKLMDKANEELHLAHNTQTSLIQWEINGKPVEISLLMVHAQDQLMT
AISENNLVKELIEMFKLIHK
>Mature_100_residues
MEEKIFEIISHSGDSRGYTFQALKEARKNNMEEAEKLMDKANEELHLAHNTQTSLIQWEINGKPVEISLLMVHAQDQLMT
AISENNLVKELIEMFKLIHK

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG1447

COG function: function code G; Phosphotransferase system cellobiose-specific component IIA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIA type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788031, Length=94, Percent_Identity=37.2340425531915, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003188 [H]

Pfam domain/function: PF02255 PTS_IIA [H]

EC number: 2.7.1.69

Molecular weight: Translated: 11593; Mature: 11593

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS51095 PTS_EIIA_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKIFEIISHSGDSRGYTFQALKEARKNNMEEAEKLMDKANEELHLAHNTQTSLIQWEI
CCHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEE
NGKPVEISLLMVHAQDQLMTAISENNLVKELIEMFKLIHK
CCCCEEEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEEKIFEIISHSGDSRGYTFQALKEARKNNMEEAEKLMDKANEELHLAHNTQTSLIQWEI
CCHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEE
NGKPVEISLLMVHAQDQLMTAISENNLVKELIEMFKLIHK
CCCCEEEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: protein N(pi)-phosphohistidine; sugar

Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8407820 [H]