| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is recQ [H]
Identifier: 187935607
GI number: 187935607
Start: 2435241
End: 2437679
Strand: Reverse
Name: recQ [H]
Synonym: CLL_A2347
Alternate gene names: 187935607
Gene position: 2437679-2435241 (Counterclockwise)
Preceding gene: 187932614
Following gene: 187933280
Centisome position: 64.14
GC content: 25.67
Gene sequence:
>2439_bases ATGAAAAGCAAAGAATTAGAACTTTTAGAAAAGTATTATGGATATAAGTCTTTTAGAAAAGGGCAAGAAAATATAATTTC AAACATTATAGATGGAAATGATGTATTAGCCATAATGCCAACTGGTGGTGGTAAATCAATTTGTTATCAAGTTCCAGCAC TTATATTTGAAGGACTTACAATAGTTATTTCACCTCTTATTTCTTTAATGAAGGATCAAGTAGATGCATTAAAAGATATG GGCATAAATGGGGAATTTATTAATAGCTCAATAAGTAGTGCTGAAGAAAATAGAGTTATAGATAATATTAGAAATGGACA ATGCAAAATATTATATGTGGCTCCAGAAAGATTAGAGTCACTTAACTTTTTAAATGTTATTTCAGAATGTAGTGTATCTC AAATTGCTATAGATGAAGCACATTGTATTTCTCAATGGGGACATGATTTTAGAACAAGCTATACAAAGGTGTCTGGTTTT ATTAAGTTACTTAAGACAAGACCTATAATTACAGCATTTACAGCGACAGCATCAGAAGAAGTAAGAGAAGATATTATAAG ACTTCTGGACTTAAATAAACCTAAAATTTTTATTACAGGATTTGATAGAGAAAATTTACTTATAAATATAATAAAATCTG GAGATAAAAAATCATACCTGCACAATTATATAAATAATAATAAGGAATCTTCAGGAGTAATTTATGCAGCAACTAGAAAA GAAGTTGATAAGATACATGAAGAATTAAGCTATAATGGATTCTCAATTACTAAATATCATGCAGGATTATCTGAAAATGA TAGAAAGCAAAATCAAGAGGATTTTATATATGACAGAAGTAATATTATGGTGGCAACTAATGCCTTTGGAATGGGAATAG ATAAGCCTAATATAAGATTTGTAGTACATTATAATATGCCTAAAAATATAGAAGGATATTATCAGGAAATAGGAAGAGCA GGAAGGGATGGAGAAAAAAGTGAATGTATCTTATTATTTTCACCACAAGATGTTCAAATACAAAAGTATTTAATAGAACA ATCTATTGAAAATATTGATAGAAAAAATAATCAATATAAAAAACTTAATGAAATGACTGATTTTGTATACAGTAATGAAT GTTATAGAAAATATATATTAGACTATTTTGGAGAAGTTTATGATCATAATTGTAACAACTGTAGTAATTGCTTAAATGAA GGAGAATTAGTAGATAAAACTATAGATGCTCAAAAAGTCCTTTCATGTATATATAGAATGAAAAATAAATTTGGTTCTGG TATGTTAGTTGATGTTCTTAGAGGATCTAAGAATAAAAAAGTTATACAATTTAACTTTAATGAATTATCAACTTATGGAA TAATGAAAGATTATTCAAATGATGAACTTAAAAATTTTATTAATACATTAATATCACATAGATATATATCAGTTGTTAAT GGAACATATCCTGTTTTAGGGTTAAATCAAAGATCAATGAGTGTATTAAAGTCAGAAGAAAAAGTTGTATTCAAAGAATT TAAAATTGAAAAGAAAGCTAGAGAAGACAATGAATTATATGCAATACTTAAAGAAATAAGAAAAGAAATTTCTACAGAAA ATGGAGTACCTCCATACGTTATATTTGGAGATGCTACACTAAAAGAAATGACGGTGAAATATCCAGTTAATAAGGAACAA ATGTTAAATATATCAGGTGTTGGAGAAATAAAATATAAAAAATATGGGGAAATATTTGAAAATGAAATAAAGAAATTTGT AAAAGAAAATAATATTGAAATATCAAATGAAATAGATGAAAAAGAAGAAGTGAAAATGGAGAGTATTCATTTAGATATTA ATACAAATGAAGAATTATTTAATAAATTAGATGAAATTAGACATGAATTTGCTAAGAAGGAAAATACAATTCCTAAAATG ATAATTTCTAAAAATTCACTTAAAGAGATAAGCGGAAGATATCCTATTAATATAGATGAATTAAAAGATATAAGTGGAAT TGGTCCAAAGAAAATTTCATTATATGGAGAAAAGCTGATTTCAGAAGTTAATGACTATATTACACAAAATAATATAGAAA TAAAATGGGTAAATAGGAAAAAAAGAAAAGTAATTATTGATGGCGAAGATAGAGAAGATAATGAAATTGCAATAGATATG TTAAAGGATGGAAAAAAATTAAATGAGATATGTGATGAAATAGAAGTGTCAATCTCAACTATCTTGGGATATGTGACTGA CTATATAAAGGAATTTGGAGAAAGCAATTTTGATTTAAATTTAGAAGACTTTTATAATGAAGAAGAAGAAAATATAATTG GTGATGTTTGTGAAAAAATTGGATATGAAAAAATAAGTGCAATAAAAAAACAACTTCCACCATATGTAAAATATGAGGCT ATACGAGCAGTTATATTAAAAAAATATTTTTTAATATAG
Upstream 100 bases:
>100_bases TATGCTGCACCATTATTCCTGCACTGTGTTTTAAATATATCAATACTCTAATAAAACATGGCAAAATAAAAATGTAGTAT TTTTAAGGAGATTTATTTAA
Downstream 100 bases:
>100_bases GATTCTGTTTTAAATATAATTAGCACTCTACTAAGTGTATATCCTAATATAAAAACTATTTATATGTATTAATGAAGTTA TTTTATTATTAATAACTAAA
Product: ATP-dependent DNA helicase RecQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 812; Mature: 812
Protein sequence:
>812_residues MKSKELELLEKYYGYKSFRKGQENIISNIIDGNDVLAIMPTGGGKSICYQVPALIFEGLTIVISPLISLMKDQVDALKDM GINGEFINSSISSAEENRVIDNIRNGQCKILYVAPERLESLNFLNVISECSVSQIAIDEAHCISQWGHDFRTSYTKVSGF IKLLKTRPIITAFTATASEEVREDIIRLLDLNKPKIFITGFDRENLLINIIKSGDKKSYLHNYINNNKESSGVIYAATRK EVDKIHEELSYNGFSITKYHAGLSENDRKQNQEDFIYDRSNIMVATNAFGMGIDKPNIRFVVHYNMPKNIEGYYQEIGRA GRDGEKSECILLFSPQDVQIQKYLIEQSIENIDRKNNQYKKLNEMTDFVYSNECYRKYILDYFGEVYDHNCNNCSNCLNE GELVDKTIDAQKVLSCIYRMKNKFGSGMLVDVLRGSKNKKVIQFNFNELSTYGIMKDYSNDELKNFINTLISHRYISVVN GTYPVLGLNQRSMSVLKSEEKVVFKEFKIEKKAREDNELYAILKEIRKEISTENGVPPYVIFGDATLKEMTVKYPVNKEQ MLNISGVGEIKYKKYGEIFENEIKKFVKENNIEISNEIDEKEEVKMESIHLDINTNEELFNKLDEIRHEFAKKENTIPKM IISKNSLKEISGRYPINIDELKDISGIGPKKISLYGEKLISEVNDYITQNNIEIKWVNRKKRKVIIDGEDREDNEIAIDM LKDGKKLNEICDEIEVSISTILGYVTDYIKEFGESNFDLNLEDFYNEEEENIIGDVCEKIGYEKISAIKKQLPPYVKYEA IRAVILKKYFLI
Sequences:
>Translated_812_residues MKSKELELLEKYYGYKSFRKGQENIISNIIDGNDVLAIMPTGGGKSICYQVPALIFEGLTIVISPLISLMKDQVDALKDM GINGEFINSSISSAEENRVIDNIRNGQCKILYVAPERLESLNFLNVISECSVSQIAIDEAHCISQWGHDFRTSYTKVSGF IKLLKTRPIITAFTATASEEVREDIIRLLDLNKPKIFITGFDRENLLINIIKSGDKKSYLHNYINNNKESSGVIYAATRK EVDKIHEELSYNGFSITKYHAGLSENDRKQNQEDFIYDRSNIMVATNAFGMGIDKPNIRFVVHYNMPKNIEGYYQEIGRA GRDGEKSECILLFSPQDVQIQKYLIEQSIENIDRKNNQYKKLNEMTDFVYSNECYRKYILDYFGEVYDHNCNNCSNCLNE GELVDKTIDAQKVLSCIYRMKNKFGSGMLVDVLRGSKNKKVIQFNFNELSTYGIMKDYSNDELKNFINTLISHRYISVVN GTYPVLGLNQRSMSVLKSEEKVVFKEFKIEKKAREDNELYAILKEIRKEISTENGVPPYVIFGDATLKEMTVKYPVNKEQ MLNISGVGEIKYKKYGEIFENEIKKFVKENNIEISNEIDEKEEVKMESIHLDINTNEELFNKLDEIRHEFAKKENTIPKM IISKNSLKEISGRYPINIDELKDISGIGPKKISLYGEKLISEVNDYITQNNIEIKWVNRKKRKVIIDGEDREDNEIAIDM LKDGKKLNEICDEIEVSISTILGYVTDYIKEFGESNFDLNLEDFYNEEEENIIGDVCEKIGYEKISAIKKQLPPYVKYEA IRAVILKKYFLI >Mature_812_residues MKSKELELLEKYYGYKSFRKGQENIISNIIDGNDVLAIMPTGGGKSICYQVPALIFEGLTIVISPLISLMKDQVDALKDM GINGEFINSSISSAEENRVIDNIRNGQCKILYVAPERLESLNFLNVISECSVSQIAIDEAHCISQWGHDFRTSYTKVSGF IKLLKTRPIITAFTATASEEVREDIIRLLDLNKPKIFITGFDRENLLINIIKSGDKKSYLHNYINNNKESSGVIYAATRK EVDKIHEELSYNGFSITKYHAGLSENDRKQNQEDFIYDRSNIMVATNAFGMGIDKPNIRFVVHYNMPKNIEGYYQEIGRA GRDGEKSECILLFSPQDVQIQKYLIEQSIENIDRKNNQYKKLNEMTDFVYSNECYRKYILDYFGEVYDHNCNNCSNCLNE GELVDKTIDAQKVLSCIYRMKNKFGSGMLVDVLRGSKNKKVIQFNFNELSTYGIMKDYSNDELKNFINTLISHRYISVVN GTYPVLGLNQRSMSVLKSEEKVVFKEFKIEKKAREDNELYAILKEIRKEISTENGVPPYVIFGDATLKEMTVKYPVNKEQ MLNISGVGEIKYKKYGEIFENEIKKFVKENNIEISNEIDEKEEVKMESIHLDINTNEELFNKLDEIRHEFAKKENTIPKM IISKNSLKEISGRYPINIDELKDISGIGPKKISLYGEKLISEVNDYITQNNIEIKWVNRKKRKVIIDGEDREDNEIAIDM LKDGKKLNEICDEIEVSISTILGYVTDYIKEFGESNFDLNLEDFYNEEEENIIGDVCEKIGYEKISAIKKQLPPYVKYEA IRAVILKKYFLI
Specific function: Probable DNA helicase. Required for DNA repair and intramolecular recombination; probably has overlapping function with recS (AC P50729). It probably acts to help generate ss-DNA from ds-DNA breaks [H]
COG id: COG0514
COG function: function code L; Superfamily II DNA helicase
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Localized throughout the nucleoid in the presence or absence of DNA double- strand breaks [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HRDC domain [H]
Homologues:
Organism=Homo sapiens, GI169218196, Length=732, Percent_Identity=30.327868852459, Blast_Score=310, Evalue=3e-84, Organism=Homo sapiens, GI110735439, Length=727, Percent_Identity=29.9862448418157, Blast_Score=308, Evalue=9e-84, Organism=Homo sapiens, GI4557365, Length=628, Percent_Identity=32.0063694267516, Blast_Score=307, Evalue=3e-83, Organism=Homo sapiens, GI148612816, Length=418, Percent_Identity=37.0813397129187, Blast_Score=275, Evalue=1e-73, Organism=Homo sapiens, GI51242943, Length=369, Percent_Identity=38.7533875338753, Blast_Score=268, Evalue=2e-71, Organism=Homo sapiens, GI51242947, Length=369, Percent_Identity=38.7533875338753, Blast_Score=267, Evalue=3e-71, Organism=Homo sapiens, GI14591902, Length=456, Percent_Identity=33.9912280701754, Blast_Score=252, Evalue=8e-67, Organism=Homo sapiens, GI14591904, Length=456, Percent_Identity=33.9912280701754, Blast_Score=252, Evalue=8e-67, Organism=Homo sapiens, GI284005309, Length=354, Percent_Identity=34.180790960452, Blast_Score=214, Evalue=3e-55, Organism=Homo sapiens, GI38327634, Length=411, Percent_Identity=23.6009732360097, Blast_Score=90, Evalue=9e-18, Organism=Homo sapiens, GI222352149, Length=375, Percent_Identity=23.2, Blast_Score=87, Evalue=9e-17, Organism=Homo sapiens, GI21071032, Length=331, Percent_Identity=24.4712990936556, Blast_Score=85, Evalue=3e-16, Organism=Homo sapiens, GI7661920, Length=347, Percent_Identity=21.0374639769452, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI301171475, Length=185, Percent_Identity=28.6486486486486, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI13514831, Length=357, Percent_Identity=23.5294117647059, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI87196351, Length=185, Percent_Identity=28.6486486486486, Blast_Score=80, Evalue=7e-15, Organism=Homo sapiens, GI301171467, Length=185, Percent_Identity=28.6486486486486, Blast_Score=80, Evalue=8e-15, Organism=Homo sapiens, GI41327771, Length=393, Percent_Identity=23.1552162849873, Blast_Score=78, Evalue=4e-14, Organism=Homo sapiens, GI55749865, Length=352, Percent_Identity=23.5795454545455, Blast_Score=77, Evalue=7e-14, Organism=Homo sapiens, GI169881239, Length=137, Percent_Identity=29.9270072992701, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI13514809, Length=137, Percent_Identity=29.9270072992701, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI148613856, Length=340, Percent_Identity=21.1764705882353, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI38201710, Length=340, Percent_Identity=21.1764705882353, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI262118318, Length=344, Percent_Identity=23.2558139534884, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI216548263, Length=344, Percent_Identity=23.2558139534884, Blast_Score=73, Evalue=1e-12, Organism=Homo sapiens, GI262231852, Length=344, Percent_Identity=23.2558139534884, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI224593278, Length=358, Percent_Identity=20.1117318435754, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI13518015, Length=344, Percent_Identity=23.2558139534884, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI51094101, Length=369, Percent_Identity=21.680216802168, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI164419743, Length=369, Percent_Identity=21.680216802168, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI4758138, Length=336, Percent_Identity=20.2380952380952, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI20149629, Length=369, Percent_Identity=21.9512195121951, Blast_Score=70, Evalue=9e-12, Organism=Escherichia coli, GI48994977, Length=607, Percent_Identity=40.0329489291598, Blast_Score=482, Evalue=1e-137, Organism=Escherichia coli, GI1787016, Length=341, Percent_Identity=23.1671554252199, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI87082221, Length=345, Percent_Identity=22.8985507246377, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI32564293, Length=710, Percent_Identity=30.7042253521127, Blast_Score=315, Evalue=5e-86, Organism=Caenorhabditis elegans, GI25145561, Length=695, Percent_Identity=30.5035971223022, Blast_Score=314, Evalue=1e-85, Organism=Caenorhabditis elegans, GI71987997, Length=467, Percent_Identity=35.5460385438972, Blast_Score=271, Evalue=8e-73, Organism=Caenorhabditis elegans, GI71987993, Length=466, Percent_Identity=35.1931330472103, Blast_Score=271, Evalue=1e-72, Organism=Caenorhabditis elegans, GI17552866, Length=404, Percent_Identity=34.4059405940594, Blast_Score=243, Evalue=4e-64, Organism=Caenorhabditis elegans, GI115533224, Length=346, Percent_Identity=24.2774566473988, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17537549, Length=356, Percent_Identity=23.0337078651685, Blast_Score=87, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71987143, Length=358, Percent_Identity=25.6983240223464, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71995724, Length=353, Percent_Identity=22.6628895184136, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17507121, Length=353, Percent_Identity=22.3796033994334, Blast_Score=84, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17507945, Length=349, Percent_Identity=22.6361031518625, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI32565321, Length=389, Percent_Identity=22.3650385604113, Blast_Score=79, Evalue=8e-15, Organism=Caenorhabditis elegans, GI71995718, Length=372, Percent_Identity=22.3118279569892, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI86570094, Length=343, Percent_Identity=23.6151603498542, Blast_Score=75, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17555296, Length=367, Percent_Identity=22.3433242506812, Blast_Score=71, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17552642, Length=348, Percent_Identity=22.1264367816092, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17510559, Length=416, Percent_Identity=20.4326923076923, Blast_Score=70, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17553716, Length=363, Percent_Identity=23.9669421487603, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71999646, Length=345, Percent_Identity=23.4782608695652, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17505370, Length=358, Percent_Identity=22.9050279329609, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71999644, Length=345, Percent_Identity=23.4782608695652, Blast_Score=67, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71982858, Length=185, Percent_Identity=23.7837837837838, Blast_Score=66, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6323844, Length=527, Percent_Identity=35.2941176470588, Blast_Score=305, Evalue=2e-83, Organism=Saccharomyces cerevisiae, GI6321360, Length=340, Percent_Identity=25.8823529411765, Blast_Score=101, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6320224, Length=343, Percent_Identity=22.7405247813411, Blast_Score=93, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6324217, Length=337, Percent_Identity=22.8486646884273, Blast_Score=90, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6322427, Length=342, Percent_Identity=22.5146198830409, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6324778, Length=246, Percent_Identity=24.7967479674797, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6321856, Length=336, Percent_Identity=22.9166666666667, Blast_Score=78, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6325138, Length=245, Percent_Identity=24.8979591836735, Blast_Score=76, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6320041, Length=354, Percent_Identity=23.1638418079096, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324620, Length=106, Percent_Identity=32.0754716981132, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323947, Length=372, Percent_Identity=21.505376344086, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323021, Length=390, Percent_Identity=22.8205128205128, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI24646066, Length=617, Percent_Identity=33.8735818476499, Blast_Score=328, Evalue=1e-89, Organism=Drosophila melanogaster, GI24664226, Length=447, Percent_Identity=33.1096196868009, Blast_Score=264, Evalue=2e-70, Organism=Drosophila melanogaster, GI24664230, Length=447, Percent_Identity=33.1096196868009, Blast_Score=261, Evalue=9e-70, Organism=Drosophila melanogaster, GI62472181, Length=447, Percent_Identity=33.1096196868009, Blast_Score=261, Evalue=1e-69, Organism=Drosophila melanogaster, GI21358123, Length=362, Percent_Identity=34.5303867403315, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI21355075, Length=366, Percent_Identity=25.6830601092896, Blast_Score=91, Evalue=4e-18, Organism=Drosophila melanogaster, GI24645031, Length=356, Percent_Identity=23.0337078651685, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI17977678, Length=402, Percent_Identity=22.8855721393035, Blast_Score=82, Evalue=2e-15, Organism=Drosophila melanogaster, GI281361218, Length=355, Percent_Identity=21.6901408450704, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI24644481, Length=355, Percent_Identity=21.6901408450704, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI24644487, Length=355, Percent_Identity=21.6901408450704, Blast_Score=80, Evalue=6e-15, Organism=Drosophila melanogaster, GI45551833, Length=355, Percent_Identity=21.6901408450704, Blast_Score=80, Evalue=6e-15, Organism=Drosophila melanogaster, GI24644485, Length=355, Percent_Identity=21.6901408450704, Blast_Score=80, Evalue=6e-15, Organism=Drosophila melanogaster, GI24644483, Length=355, Percent_Identity=21.6901408450704, Blast_Score=80, Evalue=6e-15, Organism=Drosophila melanogaster, GI17985987, Length=371, Percent_Identity=22.911051212938, Blast_Score=80, Evalue=7e-15, Organism=Drosophila melanogaster, GI24644479, Length=355, Percent_Identity=21.6901408450704, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI24584994, Length=384, Percent_Identity=22.9166666666667, Blast_Score=79, Evalue=2e-14, Organism=Drosophila melanogaster, GI28571808, Length=359, Percent_Identity=21.7270194986072, Blast_Score=79, Evalue=2e-14, Organism=Drosophila melanogaster, GI28571809, Length=359, Percent_Identity=21.7270194986072, Blast_Score=79, Evalue=2e-14, Organism=Drosophila melanogaster, GI24582080, Length=327, Percent_Identity=22.6299694189602, Blast_Score=79, Evalue=2e-14, Organism=Drosophila melanogaster, GI24582078, Length=327, Percent_Identity=22.6299694189602, Blast_Score=79, Evalue=2e-14, Organism=Drosophila melanogaster, GI17136248, Length=327, Percent_Identity=22.6299694189602, Blast_Score=79, Evalue=2e-14, Organism=Drosophila melanogaster, GI24582075, Length=327, Percent_Identity=22.6299694189602, Blast_Score=79, Evalue=2e-14, Organism=Drosophila melanogaster, GI28574962, Length=347, Percent_Identity=22.1902017291066, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI24666101, Length=345, Percent_Identity=22.0289855072464, Blast_Score=76, Evalue=9e-14, Organism=Drosophila melanogaster, GI18857967, Length=349, Percent_Identity=21.4899713467049, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24584399, Length=353, Percent_Identity=23.7960339943343, Blast_Score=71, Evalue=3e-12, Organism=Drosophila melanogaster, GI21356161, Length=198, Percent_Identity=25.7575757575758, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24585582, Length=344, Percent_Identity=22.6744186046512, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004589 - InterPro: IPR006293 - InterPro: IPR002121 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR010997 - InterPro: IPR018982 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF00570 HRDC; PF09382 RQC [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 93628; Mature: 93628
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS50967 HRDC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKELELLEKYYGYKSFRKGQENIISNIIDGNDVLAIMPTGGGKSICYQVPALIFEGLT CCCHHHHHHHHHHCHHHHHCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH IVISPLISLMKDQVDALKDMGINGEFINSSISSAEENRVIDNIRNGQCKILYVAPERLES HHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHH LNFLNVISECSVSQIAIDEAHCISQWGHDFRTSYTKVSGFIKLLKTRPIITAFTATASEE HHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHH VREDIIRLLDLNKPKIFITGFDRENLLINIIKSGDKKSYLHNYINNNKESSGVIYAATRK HHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEHHH EVDKIHEELSYNGFSITKYHAGLSENDRKQNQEDFIYDRSNIMVATNAFGMGIDKPNIRF HHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCHHHEEECCCEEEEECCCCCCCCCCCEEE VVHYNMPKNIEGYYQEIGRAGRDGEKSECILLFSPQDVQIQKYLIEQSIENIDRKNNQYK EEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHH KLNEMTDFVYSNECYRKYILDYFGEVYDHNCNNCSNCLNEGELVDKTIDAQKVLSCIYRM HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHCCHHHHHHHHHHH KNKFGSGMLVDVLRGSKNKKVIQFNFNELSTYGIMKDYSNDELKNFINTLISHRYISVVN HHHCCCCEEHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEC GTYPVLGLNQRSMSVLKSEEKVVFKEFKIEKKAREDNELYAILKEIRKEISTENGVPPYV CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEE IFGDATLKEMTVKYPVNKEQMLNISGVGEIKYKKYGEIFENEIKKFVKENNIEISNEIDE EECCCHHHHEEEECCCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCC KEEVKMESIHLDINTNEELFNKLDEIRHEFAKKENTIPKMIISKNSLKEISGRYPINIDE HHHCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHCCCCCCCHHH LKDISGIGPKKISLYGEKLISEVNDYITQNNIEIKWVNRKKRKVIIDGEDREDNEIAIDM HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCEEHHH LKDGKKLNEICDEIEVSISTILGYVTDYIKEFGESNFDLNLEDFYNEEEENIIGDVCEKI HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHH GYEKISAIKKQLPPYVKYEAIRAVILKKYFLI CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSKELELLEKYYGYKSFRKGQENIISNIIDGNDVLAIMPTGGGKSICYQVPALIFEGLT CCCHHHHHHHHHHCHHHHHCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH IVISPLISLMKDQVDALKDMGINGEFINSSISSAEENRVIDNIRNGQCKILYVAPERLES HHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHH LNFLNVISECSVSQIAIDEAHCISQWGHDFRTSYTKVSGFIKLLKTRPIITAFTATASEE HHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHH VREDIIRLLDLNKPKIFITGFDRENLLINIIKSGDKKSYLHNYINNNKESSGVIYAATRK HHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEHHH EVDKIHEELSYNGFSITKYHAGLSENDRKQNQEDFIYDRSNIMVATNAFGMGIDKPNIRF HHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCHHHEEECCCEEEEECCCCCCCCCCCEEE VVHYNMPKNIEGYYQEIGRAGRDGEKSECILLFSPQDVQIQKYLIEQSIENIDRKNNQYK EEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHH KLNEMTDFVYSNECYRKYILDYFGEVYDHNCNNCSNCLNEGELVDKTIDAQKVLSCIYRM HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHCCHHHHHHHHHHH KNKFGSGMLVDVLRGSKNKKVIQFNFNELSTYGIMKDYSNDELKNFINTLISHRYISVVN HHHCCCCEEHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEC GTYPVLGLNQRSMSVLKSEEKVVFKEFKIEKKAREDNELYAILKEIRKEISTENGVPPYV CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEE IFGDATLKEMTVKYPVNKEQMLNISGVGEIKYKKYGEIFENEIKKFVKENNIEISNEIDE EECCCHHHHEEEECCCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCC KEEVKMESIHLDINTNEELFNKLDEIRHEFAKKENTIPKMIISKNSLKEISGRYPINIDE HHHCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHCCCCCCCHHH LKDISGIGPKKISLYGEKLISEVNDYITQNNIEIKWVNRKKRKVIIDGEDREDNEIAIDM HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCEEHHH LKDGKKLNEICDEIEVSISTILGYVTDYIKEFGESNFDLNLEDFYNEEEENIIGDVCEKI HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHH GYEKISAIKKQLPPYVKYEAIRAVILKKYFLI CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 9642195 [H]