| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is adhB [H]
Identifier: 187935495
GI number: 187935495
Start: 3099614
End: 3100765
Strand: Reverse
Name: adhB [H]
Synonym: CLL_A3002
Alternate gene names: 187935495
Gene position: 3100765-3099614 (Counterclockwise)
Preceding gene: 187934724
Following gene: 187933217
Centisome position: 81.59
GC content: 32.47
Gene sequence:
>1152_bases ATGAATTTTAAATTAGAACAAAAAGTTAAAGTTATTGTTCGTCACGAATTAGCGAATACTATTTTGCAAATTCTAAACAT GGAAAAATATAAAAAACCTATGGTAGCCATTGACAGCTTTTTAGTAAATACGCCTATTATTCAAGGAATGTTTGCATTAT TAAAAGAAAATAGCATGGATTATTTTGTCTACGATAAAATAGTTTCTAATCCACCTACTGATATTATTGATGATGGAGCT AAATTATTCTTAAAAAATAATTGTGATAGTATTATAGGTATTGGAGGTGGAAGTGCTATTGATTCAGCAAGAGGAATCAA TATTGTTAGAACTTTAGGTGGAAATATCAGAGATTATGCTTTTGAGAAAGATATTCCTGAATTTTGTAAAGGATTAATTT CAGTGCCTACGACATCTGGTACCGGAAGTGAATTATCTAATGCTTTAATTGTTTCTGAACCAGAGACACATGAAAAGTTG TCTGTTTTATCAAATAATGCTGTGAGTGAATATGCTGTTTTAGCTCCTGAGTTAGCAATTACACTTCCCAAAAGTATGAC GGCAGCTACTGGTTTAGATGCATTTTCACATGCCGCTGAGGGATATACATCCAAATTATCTTCTCCAATTACAGATGCTA TTTGTGAAAAAATTATGTATTTAATTGTGAAATATCTTCCTAAAGCTATAAAGAATGGAGCTGATATAGAAGCAAGAGAA CGTATGATGGTTGCTGCTGCATTAGGTGGCTGGATGTTAAATAATGCAGGGACCCATGTTGGTCATTCACAGGCTCATAT TATTGGTGCACTTTATGGAATTCCACATGGAATGGCATGTGCTTATGCTCTACCGGGTACTTTGTTATATACGGCTAAGG TAAATCCAAAAAAAGTAAAAGAAATTGGATTAATTTTAGGGGCTGAATATCCGGCAAATCATACAGACTTAGAAATTGGT GAAATCACAGCAGAAAAATTTAAATGGTTTAGAGATGAGGTAATTGGACTTGACTCTTTTAAAAAATTCAATGTTTCTAG GGAAGAACTTATATCTAATGCAGAAAAGGTCGTTGAAGAACGTTTTGCAGGTAATTCACCAATGGAAATTAATTTAGATT TAGCTGAAAATCTATTGAAATTTTATGAATAA
Upstream 100 bases:
>100_bases TAGGTTTATAAAATGAAATGTATTAGTAAAAATATATTTATTGTAAAAGTTGATTTTAGGGGTAAAGGCAACAATGTTTA TTAAAAACTAGGAGGATATT
Downstream 100 bases:
>100_bases AGGAGGAATTAGACTATATCTATATTATGTGGAGAGACTATAGCATTTTTGTTAATAACTAATATTATATGAATATTCTT TTAGTAAAAAACCTAATGTT
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: Alcohol dehydrogenase II; ADH II [H]
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MNFKLEQKVKVIVRHELANTILQILNMEKYKKPMVAIDSFLVNTPIIQGMFALLKENSMDYFVYDKIVSNPPTDIIDDGA KLFLKNNCDSIIGIGGGSAIDSARGINIVRTLGGNIRDYAFEKDIPEFCKGLISVPTTSGTGSELSNALIVSEPETHEKL SVLSNNAVSEYAVLAPELAITLPKSMTAATGLDAFSHAAEGYTSKLSSPITDAICEKIMYLIVKYLPKAIKNGADIEARE RMMVAAALGGWMLNNAGTHVGHSQAHIIGALYGIPHGMACAYALPGTLLYTAKVNPKKVKEIGLILGAEYPANHTDLEIG EITAEKFKWFRDEVIGLDSFKKFNVSREELISNAEKVVEERFAGNSPMEINLDLAENLLKFYE
Sequences:
>Translated_383_residues MNFKLEQKVKVIVRHELANTILQILNMEKYKKPMVAIDSFLVNTPIIQGMFALLKENSMDYFVYDKIVSNPPTDIIDDGA KLFLKNNCDSIIGIGGGSAIDSARGINIVRTLGGNIRDYAFEKDIPEFCKGLISVPTTSGTGSELSNALIVSEPETHEKL SVLSNNAVSEYAVLAPELAITLPKSMTAATGLDAFSHAAEGYTSKLSSPITDAICEKIMYLIVKYLPKAIKNGADIEARE RMMVAAALGGWMLNNAGTHVGHSQAHIIGALYGIPHGMACAYALPGTLLYTAKVNPKKVKEIGLILGAEYPANHTDLEIG EITAEKFKWFRDEVIGLDSFKKFNVSREELISNAEKVVEERFAGNSPMEINLDLAENLLKFYE >Mature_383_residues MNFKLEQKVKVIVRHELANTILQILNMEKYKKPMVAIDSFLVNTPIIQGMFALLKENSMDYFVYDKIVSNPPTDIIDDGA KLFLKNNCDSIIGIGGGSAIDSARGINIVRTLGGNIRDYAFEKDIPEFCKGLISVPTTSGTGSELSNALIVSEPETHEKL SVLSNNAVSEYAVLAPELAITLPKSMTAATGLDAFSHAAEGYTSKLSSPITDAICEKIMYLIVKYLPKAIKNGADIEARE RMMVAAALGGWMLNNAGTHVGHSQAHIIGALYGIPHGMACAYALPGTLLYTAKVNPKKVKEIGLILGAEYPANHTDLEIG EITAEKFKWFRDEVIGLDSFKKFNVSREELISNAEKVVEERFAGNSPMEINLDLAENLLKFYE
Specific function: Unknown
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=310, Percent_Identity=26.7741935483871, Blast_Score=100, Evalue=3e-21, Organism=Escherichia coli, GI48994951, Length=355, Percent_Identity=30.4225352112676, Blast_Score=184, Evalue=8e-48, Organism=Escherichia coli, GI1789163, Length=361, Percent_Identity=24.6537396121884, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1787493, Length=360, Percent_Identity=28.6111111111111, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI87082107, Length=285, Percent_Identity=30.8771929824561, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1789386, Length=256, Percent_Identity=28.515625, Blast_Score=83, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17537053, Length=344, Percent_Identity=24.7093023255814, Blast_Score=101, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6321181, Length=281, Percent_Identity=35.2313167259786, Blast_Score=158, Evalue=1e-39, Organism=Drosophila melanogaster, GI24657991, Length=394, Percent_Identity=24.8730964467005, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 41879; Mature: 41879
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKLEQKVKVIVRHELANTILQILNMEKYKKPMVAIDSFLVNTPIIQGMFALLKENSMD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC YFVYDKIVSNPPTDIIDDGAKLFLKNNCDSIIGIGGGSAIDSARGINIVRTLGGNIRDYA EEEEHHHHCCCCCHHHCCCHHEEEECCCCCEEECCCCCHHHCCCCCHHHHHCCCCHHHHH FEKDIPEFCKGLISVPTTSGTGSELSNALIVSEPETHEKLSVLSNNAVSEYAVLAPELAI HHCCHHHHHHHHHCCCCCCCCCHHHCCCEEECCCCHHHHHHHHHCCCHHHHHHHCCHHHE TLPKSMTAATGLDAFSHAAEGYTSKLSSPITDAICEKIMYLIVKYLPKAIKNGADIEARE ECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH RMMVAAALGGWMLNNAGTHVGHSQAHIIGALYGIPHGMACAYALPGTLLYTAKVNPKKVK HHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCHHHHH EIGLILGAEYPANHTDLEIGEITAEKFKWFRDEVIGLDSFKKFNVSREELISNAEKVVEE HHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHH RFAGNSPMEINLDLAENLLKFYE HHCCCCCCEEEHHHHHHHHHHCC >Mature Secondary Structure MNFKLEQKVKVIVRHELANTILQILNMEKYKKPMVAIDSFLVNTPIIQGMFALLKENSMD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC YFVYDKIVSNPPTDIIDDGAKLFLKNNCDSIIGIGGGSAIDSARGINIVRTLGGNIRDYA EEEEHHHHCCCCCHHHCCCHHEEEECCCCCEEECCCCCHHHCCCCCHHHHHCCCCHHHHH FEKDIPEFCKGLISVPTTSGTGSELSNALIVSEPETHEKLSVLSNNAVSEYAVLAPELAI HHCCHHHHHHHHHCCCCCCCCCHHHCCCEEECCCCHHHHHHHHHCCCHHHHHHHCCHHHE TLPKSMTAATGLDAFSHAAEGYTSKLSSPITDAICEKIMYLIVKYLPKAIKNGADIEARE ECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH RMMVAAALGGWMLNNAGTHVGHSQAHIIGALYGIPHGMACAYALPGTLLYTAKVNPKKVK HHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCHHHHH EIGLILGAEYPANHTDLEIGEITAEKFKWFRDEVIGLDSFKKFNVSREELISNAEKVVEE HHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHH RFAGNSPMEINLDLAENLLKFYE HHCCCCCCEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3584063; 2308827; 2935393 [H]