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The map label for this gene is ddh [H]

Identifier: 187933217

GI number: 187933217

Start: 3096988

End: 3097965

Strand: Reverse

Name: ddh [H]

Synonym: CLL_A3000

Alternate gene names: 187933217

Gene position: 3097965-3096988 (Counterclockwise)

Preceding gene: 187935495

Following gene: 187934535

Centisome position: 81.52

GC content: 32.62

Gene sequence:

>978_bases
ATGAGTAATAAAATTAAAGTTGGAGTAATTGGATATGGAAATTTAGGAAGAGGGGTATTAAAGGCAATTAAACAAAGTGA
TGACATAGAGTTAGAGGGTGTATTTACAAGAAGAGAAGGAGTTTCTATTGAGGATGGCTCAAATGCTATACATATTTCAA
AAATCGCAGAATATAAGGATAAAGTTGATGTTATGATACTTTGCGGAGGATCAGCTACTGACTTACCAGAGCAAGGACCT
AAGATTGCAGAAATGTTTAATACTGTAGATAGCTTTGATACACATGCAAAGATTCCACAATATTTTGAAAGAATTGATAA
GGTTGCTAAATCTGCTGGAACTTTAAGTATAATTTCAGTTGGTTGGGATCCAGGTTTATTTTCTTTAAATAGATTAATGG
GACAAACTATTTTACCACAAGGAAAAGACTATACTTTTTGGGGGAAAGGAGTAAGTCAAGGTCACTCAGATGCTATAAGA
AGAATAGATGGAGTTAAAGACGGAAAACAATATACAATTCCTAAAGAAGAAGCATTATCAAAAGTTAGAACTGGTGAAAA
TCCAGAACTTACAACTAGAGAAAAACATTTAAGAGTTTGTTATGTTGTATTAGAAGATGGTGCAGATAAGACAAGAGTAG
AGAATGAAATTAAGACTATGCCAAATTATTTTTCAGACTATGATACGGAAGTTAACTTTATAAGTGAAGAAGAATTAAAG
AAAAATCATTCAGGAATGCCACATGGAGGTTTTGTTATAAGAACAGGGGTTACAGGTAATGGAAATAAGGAGAAAATAGA
ATTTTCACTTTCATTAGATAGTAATCCAGAATTTACTTCAAGTGTATTAGTTGCATATGCTAGGGCAATTGTTAAGATGG
CTAAAGACGGAAAAACAGGTGCTTGCACAGTATTTGATGTTCCACCAGCATATCTTTCAGCGAAATCACCAGAAGAATTA
AGAAAAGAATTATTATAA

Upstream 100 bases:

>100_bases
ATGTTTCTATTTTTCAGTTACTTTGAATAAATAATACGAATAAAATATGGTAGAATAGTAATTAATTAAAATTAAAATTA
AAAATGGAGGGCTATATTTT

Downstream 100 bases:

>100_bases
TTTTATTAGTGGTTAAAATTTATTTATGGGTTTTTAAGTAATATTGTATAAATAAATTTTAAGTTATTTATTAGTAAGAG
AGATAAATTGAGCAATATAT

Product: diaminopimelate dehydrogenase

Products: NA

Alternate protein names: Meso-DAP dehydrogenase [H]

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSNKIKVGVIGYGNLGRGVLKAIKQSDDIELEGVFTRREGVSIEDGSNAIHISKIAEYKDKVDVMILCGGSATDLPEQGP
KIAEMFNTVDSFDTHAKIPQYFERIDKVAKSAGTLSIISVGWDPGLFSLNRLMGQTILPQGKDYTFWGKGVSQGHSDAIR
RIDGVKDGKQYTIPKEEALSKVRTGENPELTTREKHLRVCYVVLEDGADKTRVENEIKTMPNYFSDYDTEVNFISEEELK
KNHSGMPHGGFVIRTGVTGNGNKEKIEFSLSLDSNPEFTSSVLVAYARAIVKMAKDGKTGACTVFDVPPAYLSAKSPEEL
RKELL

Sequences:

>Translated_325_residues
MSNKIKVGVIGYGNLGRGVLKAIKQSDDIELEGVFTRREGVSIEDGSNAIHISKIAEYKDKVDVMILCGGSATDLPEQGP
KIAEMFNTVDSFDTHAKIPQYFERIDKVAKSAGTLSIISVGWDPGLFSLNRLMGQTILPQGKDYTFWGKGVSQGHSDAIR
RIDGVKDGKQYTIPKEEALSKVRTGENPELTTREKHLRVCYVVLEDGADKTRVENEIKTMPNYFSDYDTEVNFISEEELK
KNHSGMPHGGFVIRTGVTGNGNKEKIEFSLSLDSNPEFTSSVLVAYARAIVKMAKDGKTGACTVFDVPPAYLSAKSPEEL
RKELL
>Mature_324_residues
SNKIKVGVIGYGNLGRGVLKAIKQSDDIELEGVFTRREGVSIEDGSNAIHISKIAEYKDKVDVMILCGGSATDLPEQGPK
IAEMFNTVDSFDTHAKIPQYFERIDKVAKSAGTLSIISVGWDPGLFSLNRLMGQTILPQGKDYTFWGKGVSQGHSDAIRR
IDGVKDGKQYTIPKEEALSKVRTGENPELTTREKHLRVCYVVLEDGADKTRVENEIKTMPNYFSDYDTEVNFISEEELKK
NHSGMPHGGFVIRTGVTGNGNKEKIEFSLSLDSNPEFTSSVLVAYARAIVKMAKDGKTGACTVFDVPPAYLSAKSPEELR
KELL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000846
- InterPro:   IPR010190
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01113 DapB_N [H]

EC number: =1.4.1.16 [H]

Molecular weight: Translated: 35789; Mature: 35658

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKIKVGVIGYGNLGRGVLKAIKQSDDIELEGVFTRREGVSIEDGSNAIHISKIAEYKD
CCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEEEEECCCCCEECCCCEEEHHHHHHHHC
KVDVMILCGGSATDLPEQGPKIAEMFNTVDSFDTHAKIPQYFERIDKVAKSAGTLSIISV
CCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
GWDPGLFSLNRLMGQTILPQGKDYTFWGKGVSQGHSDAIRRIDGVKDGKQYTIPKEEALS
CCCCCHHHHHHHHCHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCEECCCHHHHHH
KVRTGENPELTTREKHLRVCYVVLEDGADKTRVENEIKTMPNYFSDYDTEVNFISEEELK
HHHCCCCCCCCCHHCCEEEEEEEEECCCCHHHHHHHHHHCCHHHHCCCCCEEECCHHHHH
KNHSGMPHGGFVIRTGVTGNGNKEKIEFSLSLDSNPEFTSSVLVAYARAIVKMAKDGKTG
HHCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
ACTVFDVPPAYLSAKSPEELRKELL
EEEEEECCHHHHCCCCHHHHHHHCC
>Mature Secondary Structure 
SNKIKVGVIGYGNLGRGVLKAIKQSDDIELEGVFTRREGVSIEDGSNAIHISKIAEYKD
CCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEEEEECCCCCEECCCCEEEHHHHHHHHC
KVDVMILCGGSATDLPEQGPKIAEMFNTVDSFDTHAKIPQYFERIDKVAKSAGTLSIISV
CCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
GWDPGLFSLNRLMGQTILPQGKDYTFWGKGVSQGHSDAIRRIDGVKDGKQYTIPKEEALS
CCCCCHHHHHHHHCHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCEECCCHHHHHH
KVRTGENPELTTREKHLRVCYVVLEDGADKTRVENEIKTMPNYFSDYDTEVNFISEEELK
HHHCCCCCCCCCHHCCEEEEEEEEECCCCHHHHHHHHHHCCHHHHCCCCCEEECCHHHHH
KNHSGMPHGGFVIRTGVTGNGNKEKIEFSLSLDSNPEFTSSVLVAYARAIVKMAKDGKTG
HHCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
ACTVFDVPPAYLSAKSPEELRKELL
EEEEEECCHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3588313; 12948626; 8885833; 9521647 [H]