| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935461
Identifier: 187935461
GI number: 187935461
Start: 2572383
End: 2573291
Strand: Reverse
Name: 187935461
Synonym: CLL_A2480
Alternate gene names: NA
Gene position: 2573291-2572383 (Counterclockwise)
Preceding gene: 187934312
Following gene: 187932865
Centisome position: 67.71
GC content: 23.32
Gene sequence:
>909_bases ATGCTTGTTTTGAAATTAGCTTATAATGATGAATTAGATTTTGTTAGTGAATTACAAGATTTAAGAGAATTGCTAAAGAA AAAGAATATATTAATAGGATTAGTGGAAAGCATAGAAGACAAGACTCATATAATAAAAATCATTTGTGAAGAAGAACACT ATAATGAAAAGGTAAAAGATATTATTAATTTATATGTAAGTAATATTTTATATAAAATTGTTATTGATAATTATAGAGAA AAAGAAATGTTGGAATTTTTAACAGAAAATTATTTCTTTTTAAAGCAAGATGAAATATTAGAAATAGAAGATGATATTGT AAAGGTACTAGAATGTGAAAGTGGATTAAAAGATGGTAACTCTATTTATTATTTAAATAAAATGAATGGAATTATTGAAG AGATAAAAGATTGTATAAAAGAAAAGCAAGAAATTAACATAAATGGATTCATAACATTTAGAATGAAGAAACTTAGAGGC GATATAGAAAAAATAATACAAAAAATAGTTGAAAACTACATTGTTGAAAAGGAATATAAGGAGTTTGTTAAATTATTAAA GTATTTTGTTGATATACAAGACTATAAGATTGAGCTTATAGATATATTCATAGAAGACAGTGGTAACTATAGAGTAACTG ATAATTATGAAAAAGATTTATTAAAAACATTTAAGGAAGAATTCTCAGATTGCAAAAAAATGAGTGATGTTAGTGCAGAA GATATATTGATAAGTGGATTAATTACAAACACTCCTAAAAAGATAATCATTCATAATAAAGAGAATTCTATCAATAGAGA GTTCTTAGAGACTATTAATAGTGTGTTTGGAGAAAGGGTCGAATATTGCACAGGATGTGTGAAATGTGAAAATAAAAAAA TAATAATAAAAAGTATTGACACATTATGA
Upstream 100 bases:
>100_bases AAAAAAAAACAATAGGATATGAAAATCTAAAATTTAGTATTTTTATAAGTATAAGAGCTTTAAGTTTATTACATACTAAT GTAAGAAGGGAGTGAAATCC
Downstream 100 bases:
>100_bases AATGCTTGATATAATTTAGTTCGTAAAGAAGAAACATAGCCGTTTCTCACCATACAGTTGTGAAGTACTAGTGTGGTTAT ATCTCTAGATTTTATCAATA
Product: sporulation protein YtxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MLVLKLAYNDELDFVSELQDLRELLKKKNILIGLVESIEDKTHIIKIICEEEHYNEKVKDIINLYVSNILYKIVIDNYRE KEMLEFLTENYFFLKQDEILEIEDDIVKVLECESGLKDGNSIYYLNKMNGIIEEIKDCIKEKQEININGFITFRMKKLRG DIEKIIQKIVENYIVEKEYKEFVKLLKYFVDIQDYKIELIDIFIEDSGNYRVTDNYEKDLLKTFKEEFSDCKKMSDVSAE DILISGLITNTPKKIIIHNKENSINREFLETINSVFGERVEYCTGCVKCENKKIIIKSIDTL
Sequences:
>Translated_302_residues MLVLKLAYNDELDFVSELQDLRELLKKKNILIGLVESIEDKTHIIKIICEEEHYNEKVKDIINLYVSNILYKIVIDNYRE KEMLEFLTENYFFLKQDEILEIEDDIVKVLECESGLKDGNSIYYLNKMNGIIEEIKDCIKEKQEININGFITFRMKKLRG DIEKIIQKIVENYIVEKEYKEFVKLLKYFVDIQDYKIELIDIFIEDSGNYRVTDNYEKDLLKTFKEEFSDCKKMSDVSAE DILISGLITNTPKKIIIHNKENSINREFLETINSVFGERVEYCTGCVKCENKKIIIKSIDTL >Mature_302_residues MLVLKLAYNDELDFVSELQDLRELLKKKNILIGLVESIEDKTHIIKIICEEEHYNEKVKDIINLYVSNILYKIVIDNYRE KEMLEFLTENYFFLKQDEILEIEDDIVKVLECESGLKDGNSIYYLNKMNGIIEEIKDCIKEKQEININGFITFRMKKLRG DIEKIIQKIVENYIVEKEYKEFVKLLKYFVDIQDYKIELIDIFIEDSGNYRVTDNYEKDLLKTFKEEFSDCKKMSDVSAE DILISGLITNTPKKIIIHNKENSINREFLETINSVFGERVEYCTGCVKCENKKIIIKSIDTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35749; Mature: 35749
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVLKLAYNDELDFVSELQDLRELLKKKNILIGLVESIEDKTHIIKIICEEEHYNEKVKD CEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHEEEEEECCHHHHHHHHH IINLYVSNILYKIVIDNYREKEMLEFLTENYFFLKQDEILEIEDDIVKVLECESGLKDGN HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCC SIYYLNKMNGIIEEIKDCIKEKQEININGFITFRMKKLRGDIEKIIQKIVENYIVEKEYK EEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH EFVKLLKYFVDIQDYKIELIDIFIEDSGNYRVTDNYEKDLLKTFKEEFSDCKKMSDVSAE HHHHHHHHHHCHHCCEEEEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCHH DILISGLITNTPKKIIIHNKENSINREFLETINSVFGERVEYCTGCVKCENKKIIIKSID HHHEEHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECC TL CC >Mature Secondary Structure MLVLKLAYNDELDFVSELQDLRELLKKKNILIGLVESIEDKTHIIKIICEEEHYNEKVKD CEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHEEEEEECCHHHHHHHHH IINLYVSNILYKIVIDNYREKEMLEFLTENYFFLKQDEILEIEDDIVKVLECESGLKDGN HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCC SIYYLNKMNGIIEEIKDCIKEKQEININGFITFRMKKLRGDIEKIIQKIVENYIVEKEYK EEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH EFVKLLKYFVDIQDYKIELIDIFIEDSGNYRVTDNYEKDLLKTFKEEFSDCKKMSDVSAE HHHHHHHHHHCHHCCEEEEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCHH DILISGLITNTPKKIIIHNKENSINREFLETINSVFGERVEYCTGCVKCENKKIIIKSID HHHEEHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECC TL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA