Click here to switch to the map view.

The map label for this gene is trpH [H]

Identifier: 187935455

GI number: 187935455

Start: 2369969

End: 2370664

Strand: Reverse

Name: trpH [H]

Synonym: CLL_A2300

Alternate gene names: 187935455

Gene position: 2370664-2369969 (Counterclockwise)

Preceding gene: 187934324

Following gene: 187934341

Centisome position: 62.38

GC content: 26.87

Gene sequence:

>696_bases
ATGTATAAAAAAGGAGATTTTCATATTCACTCAACATCTTCAGATGGTGGTTATACCCCAAAACAAGTTGTTAATTTTGC
TAAAAAAAGAGGTGTTGATATAATTTCTTTAACAGATCATAACAATACTTGTGGTATAGATGAATCTATATTAGAGGGGG
AAAAAATAGGAGTTAAAGTAATACCAGGAGTTGAACTTTCAACCAAGCATAAAAATGGAAGTAGGGTTCATATATTAGGA
TATTTTAAGGATGAGAGTTATAAAGATGAACTTCTTGTTAAAATTTTAAAAGATGTGAAAAATCATAAGATAAATAATAT
AAAGAAAATACTAGGAAGATATATAGAAATTAATAAAGGTGATAGATTATCTGTTGATAATGGAATTAAAATATTAAAGT
TTTTTGGAGCAACAGTCGTACTTGCACATCCTGTACTGCTTAATAGAAATGATTTTATTGAAATTATAGAACTAGACTTT
GATGGACTGGAAGCTAAATATTTTAGTAATAGTGAAGAAGATACAAAATATTTTTCAAAAGTTGCTAAAAATAAGAATCT
TCTTTATAGCGCAGGATCGGATTTTCATAATTATAAGAAGGATTATAGAGAACATGGCCTTATAGGAGATGTATATTTAA
ATGAAAATGAAATATATAATTTTCTAACAAAAGGTGGATTGTATCCATACATTTGA

Upstream 100 bases:

>100_bases
TCTAATTTTAAAGAATAACATGATATGAAAATAATAAATAACTATTATATTATAAATCTCATACAATAAAATGTGGTATA
ACATTTTAAAGGAGTTATAG

Downstream 100 bases:

>100_bases
CTAAATTATCCTTAATTACTATTATAAAGTAAAGAATGATTCTATTTTCAAGGGGGCACAAAAATGAAATTTTCAACTAA
AAGAATAGTATTAATAGGAG

Product: PHP domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MYKKGDFHIHSTSSDGGYTPKQVVNFAKKRGVDIISLTDHNNTCGIDESILEGEKIGVKVIPGVELSTKHKNGSRVHILG
YFKDESYKDELLVKILKDVKNHKINNIKKILGRYIEINKGDRLSVDNGIKILKFFGATVVLAHPVLLNRNDFIEIIELDF
DGLEAKYFSNSEEDTKYFSKVAKNKNLLYSAGSDFHNYKKDYREHGLIGDVYLNENEIYNFLTKGGLYPYI

Sequences:

>Translated_231_residues
MYKKGDFHIHSTSSDGGYTPKQVVNFAKKRGVDIISLTDHNNTCGIDESILEGEKIGVKVIPGVELSTKHKNGSRVHILG
YFKDESYKDELLVKILKDVKNHKINNIKKILGRYIEINKGDRLSVDNGIKILKFFGATVVLAHPVLLNRNDFIEIIELDF
DGLEAKYFSNSEEDTKYFSKVAKNKNLLYSAGSDFHNYKKDYREHGLIGDVYLNENEIYNFLTKGGLYPYI
>Mature_231_residues
MYKKGDFHIHSTSSDGGYTPKQVVNFAKKRGVDIISLTDHNNTCGIDESILEGEKIGVKVIPGVELSTKHKNGSRVHILG
YFKDESYKDELLVKILKDVKNHKINNIKKILGRYIEINKGDRLSVDNGIKILKFFGATVVLAHPVLLNRNDFIEIIELDF
DGLEAKYFSNSEEDTKYFSKVAKNKNLLYSAGSDFHNYKKDYREHGLIGDVYLNENEIYNFLTKGGLYPYI

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 26328; Mature: 26328

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKGDFHIHSTSSDGGYTPKQVVNFAKKRGVDIISLTDHNNTCGIDESILEGEKIGVKV
CCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCCCEEE
IPGVELSTKHKNGSRVHILGYFKDESYKDELLVKILKDVKNHKINNIKKILGRYIEINKG
ECCCEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCC
DRLSVDNGIKILKFFGATVVLAHPVLLNRNDFIEIIELDFDGLEAKYFSNSEEDTKYFSK
CEEECCCCHHHHHHHCCCEEECCCEEECCCCCEEEEEECCCCCEEEECCCCCHHHHHHHH
VAKNKNLLYSAGSDFHNYKKDYREHGLIGDVYLNENEIYNFLTKGGLYPYI
HHCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYKKGDFHIHSTSSDGGYTPKQVVNFAKKRGVDIISLTDHNNTCGIDESILEGEKIGVKV
CCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCCCEEE
IPGVELSTKHKNGSRVHILGYFKDESYKDELLVKILKDVKNHKINNIKKILGRYIEINKG
ECCCEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCC
DRLSVDNGIKILKFFGATVVLAHPVLLNRNDFIEIIELDFDGLEAKYFSNSEEDTKYFSK
CEEECCCCHHHHHHHCCCEEECCCEEECCCCCEEEEEECCCCCEEEECCCCCHHHHHHHH
VAKNKNLLYSAGSDFHNYKKDYREHGLIGDVYLNENEIYNFLTKGGLYPYI
HHCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]