| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935439
Identifier: 187935439
GI number: 187935439
Start: 2874052
End: 2875053
Strand: Reverse
Name: 187935439
Synonym: CLL_A2793
Alternate gene names: NA
Gene position: 2875053-2874052 (Counterclockwise)
Preceding gene: 187932689
Following gene: 187935764
Centisome position: 75.65
GC content: 38.92
Gene sequence:
>1002_bases ATGGCAATATTTGAAAGTTATGAAAGAAGAATTAATCAAATCACTCCAGTACTAGAAAAGTACGGAATGAAAACTCTAGA AGATGCGCAAGCAGTTTGTGAATCAATAGGAATTGATCCATGTACAATAGCTAAAGAAACTCAACCAATAGCGTTTGAAA ATGCTGGATGGGCTTATACTTTAGGTGCTGCTATAGCTATAAAGAAAGGTTGCAACAAAGCTGCTGAAGCTGCTGAAGCA ATCGGAGAAGGATTACAAGCATTCTGTATCCCTGGATCAGTTGCTGATGATAGAAAAGTTGGTTTAGGACACGGAAACTT AGGAGCTATGCTTTTAAGAGAAGAAACTAAATGTTTCGCATTCTTAGCAGGACACGAAAGTTTCGCTGCTGCTGAAGGTG CTATCAAAATAGCTGAAAAAGCTAACAGAGTAAGAAAAGAACCATTAAGAGTTATATTAAACGGTCTTGGAAAAGATGCT GCATTCATAATCTCAAGAATTAATGGATTCACTTACGTTCAAACTAAATTTGACTACTACACTGGAGAAGTTAAAGTAGT TAAAGAAAAAGCATACTCAAACGGAGAAAGAGCTAAAGTAAGATGTTACGGTTCTGACGATGTTAGAGAAGGTGTTGCTA TCATGCATATGGAAGGCGTTGACGTATCAATCACTGGTAACTCAACTAACCCAACAAGATTCCAACATCCAGTTGCAGGA ACATACAAAAAAGAATGTATGGAACAAGGTAAGAAATACTTCTCAGTAGCATCAGGTGGTGGTACTGGAAGAACTCTTCA CCCAGATAACATGGGAGCAGGTCCTGCTTCTTATGGTATGACTGATACTATGGGAAGAATGCATTCAGATGCACAATTCG CAGGATCATCATCAGTTCCAGCTCACGTTGAAATGATGGGTCTTATCGGAATGGGTAACAACCCAATGGTAGGATGTACT GTTGCAGTAGCTGTTGCTGTTGAAGAAGGAATGAACAAGTAG
Upstream 100 bases:
>100_bases GCATTAGAAGAAGCTAGAGGACAATACGGAAGAGTTGCTGATGCTGCTGAATTAATGGACCCAAGACATAAATAATTATT TGTAAAGGAGGATTTTTATT
Downstream 100 bases:
>100_bases TAATATCAATGCTTTCAGGGATTTATATAAGTTTTTAATTTATATAAAATAATCATGAAAAACCATTGAAAAATGTATTT TGTCAACGAATTGTCAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MAIFESYERRINQITPVLEKYGMKTLEDAQAVCESIGIDPCTIAKETQPIAFENAGWAYTLGAAIAIKKGCNKAAEAAEA IGEGLQAFCIPGSVADDRKVGLGHGNLGAMLLREETKCFAFLAGHESFAAAEGAIKIAEKANRVRKEPLRVILNGLGKDA AFIISRINGFTYVQTKFDYYTGEVKVVKEKAYSNGERAKVRCYGSDDVREGVAIMHMEGVDVSITGNSTNPTRFQHPVAG TYKKECMEQGKKYFSVASGGGTGRTLHPDNMGAGPASYGMTDTMGRMHSDAQFAGSSSVPAHVEMMGLIGMGNNPMVGCT VAVAVAVEEGMNK
Sequences:
>Translated_333_residues MAIFESYERRINQITPVLEKYGMKTLEDAQAVCESIGIDPCTIAKETQPIAFENAGWAYTLGAAIAIKKGCNKAAEAAEA IGEGLQAFCIPGSVADDRKVGLGHGNLGAMLLREETKCFAFLAGHESFAAAEGAIKIAEKANRVRKEPLRVILNGLGKDA AFIISRINGFTYVQTKFDYYTGEVKVVKEKAYSNGERAKVRCYGSDDVREGVAIMHMEGVDVSITGNSTNPTRFQHPVAG TYKKECMEQGKKYFSVASGGGTGRTLHPDNMGAGPASYGMTDTMGRMHSDAQFAGSSSVPAHVEMMGLIGMGNNPMVGCT VAVAVAVEEGMNK >Mature_332_residues AIFESYERRINQITPVLEKYGMKTLEDAQAVCESIGIDPCTIAKETQPIAFENAGWAYTLGAAIAIKKGCNKAAEAAEAI GEGLQAFCIPGSVADDRKVGLGHGNLGAMLLREETKCFAFLAGHESFAAAEGAIKIAEKANRVRKEPLRVILNGLGKDAA FIISRINGFTYVQTKFDYYTGEVKVVKEKAYSNGERAKVRCYGSDDVREGVAIMHMEGVDVSITGNSTNPTRFQHPVAGT YKKECMEQGKKYFSVASGGGTGRTLHPDNMGAGPASYGMTDTMGRMHSDAQFAGSSSVPAHVEMMGLIGMGNNPMVGCTV AVAVAVEEGMNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35533; Mature: 35402
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIFESYERRINQITPVLEKYGMKTLEDAQAVCESIGIDPCTIAKETQPIAFENAGWAYT CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCCCCCEECCCCCEEE LGAAIAIKKGCNKAAEAAEAIGEGLQAFCIPGSVADDRKVGLGHGNLGAMLLREETKCFA HHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCEECCCCCCCCCEEEECCCCEEE FLAGHESFAAAEGAIKIAEKANRVRKEPLRVILNGLGKDAAFIISRINGFTYVQTKFDYY EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEEEE TGEVKVVKEKAYSNGERAKVRCYGSDDVREGVAIMHMEGVDVSITGNSTNPTRFQHPVAG CCEEEEEEEHHCCCCCCEEEEEECCCHHHCCEEEEEECCEEEEEECCCCCCCCCCCCCCC TYKKECMEQGKKYFSVASGGGTGRTLHPDNMGAGPASYGMTDTMGRMHSDAQFAGSSSVP HHHHHHHHHCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHCCCCCCC AHVEMMGLIGMGNNPMVGCTVAVAVAVEEGMNK CEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure AIFESYERRINQITPVLEKYGMKTLEDAQAVCESIGIDPCTIAKETQPIAFENAGWAYT CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCCCCCEECCCCCEEE LGAAIAIKKGCNKAAEAAEAIGEGLQAFCIPGSVADDRKVGLGHGNLGAMLLREETKCFA HHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCEECCCCCCCCCEEEECCCCEEE FLAGHESFAAAEGAIKIAEKANRVRKEPLRVILNGLGKDAAFIISRINGFTYVQTKFDYY EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEEEE TGEVKVVKEKAYSNGERAKVRCYGSDDVREGVAIMHMEGVDVSITGNSTNPTRFQHPVAG CCEEEEEEEHHCCCCCCEEEEEECCCHHHCCEEEEEECCEEEEEECCCCCCCCCCCCCCC TYKKECMEQGKKYFSVASGGGTGRTLHPDNMGAGPASYGMTDTMGRMHSDAQFAGSSSVP HHHHHHHHHCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHCCCCCCC AHVEMMGLIGMGNNPMVGCTVAVAVAVEEGMNK CEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA