Click here to switch to the map view.

The map label for this gene is 187932689

Identifier: 187932689

GI number: 187932689

Start: 2875079

End: 2875768

Strand: Reverse

Name: 187932689

Synonym: CLL_A2794

Alternate gene names: NA

Gene position: 2875768-2875079 (Counterclockwise)

Preceding gene: 187934686

Following gene: 187935439

Centisome position: 75.67

GC content: 37.25

Gene sequence:

>690_bases
ATGTATTCAAAAGAAGTTGAAGAAATGTGTGTAGTTGCTAAGGGTCCTAATCACGGACCAGCACCAATTCCTGCAGAAGG
AAAATGGGTACAATCTAAAGAAGTAACTGATATATCAGGATTAACTCATGGAATAGGTTGGTGTGCACCACAACAAGGAG
CTTGTAAATTAACTCTAAATGTTAAGGACGGTATAATCGAAGAAGCTTTAGTAGAAACAATTGGATGTTCAGGAATGACT
CATTCAGCTGCAATGGCTTCAGAAATATTACCAGGAAAGACTATATTAGAAGCATTAAACACAGATTTAGTTTGTGACGC
TATAAACACAGCTATGAGAGAATTATTCTTACAAATAGTTTATGGAAGAACTCAAACTGCGTTCTCAGAAGGTGGACTAC
CAGTAGGAGCAGGTCTTGAAGATTTAGGAAAAGGTCTAAGATCTCAAGTTGGTACTATGTACGGAACTCTTGCTAAAGGA
CCTAGATACTTAGAAATGGCTGAAGGATATGTTACAGACGTAGCTTTAGACGAAGACAAAGAAATTATCGGATACAAATT
CGTTAATTTAGGAAAAATGATGGAGAACATAGGCAAGGGTATGGATGCTAATAAAGCATTAGAAGAAGCTAGAGGACAAT
ACGGAAGAGTTGCTGATGCTGCTGAATTAATGGACCCAAGACATAAATAA

Upstream 100 bases:

>100_bases
CCAGTGGGATGAATTTAAGCCCGGTACTATATTAAAAGAGAAATTTAAGTTTTTATTATAGTAATCATCTATTAATTAGG
GAGAGGAGCAAATTTATATG

Downstream 100 bases:

>100_bases
TTATTTGTAAAGGAGGATTTTTATTATGGCAATATTTGAAAGTTATGAAAGAAGAATTAATCAAATCACTCCAGTACTAG
AAAAGTACGGAATGAAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NifU-Like Domain Containing Protein; NifU-Related Domain Containing Protein; NifU Domain-Containing Protein

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MYSKEVEEMCVVAKGPNHGPAPIPAEGKWVQSKEVTDISGLTHGIGWCAPQQGACKLTLNVKDGIIEEALVETIGCSGMT
HSAAMASEILPGKTILEALNTDLVCDAINTAMRELFLQIVYGRTQTAFSEGGLPVGAGLEDLGKGLRSQVGTMYGTLAKG
PRYLEMAEGYVTDVALDEDKEIIGYKFVNLGKMMENIGKGMDANKALEEARGQYGRVADAAELMDPRHK

Sequences:

>Translated_229_residues
MYSKEVEEMCVVAKGPNHGPAPIPAEGKWVQSKEVTDISGLTHGIGWCAPQQGACKLTLNVKDGIIEEALVETIGCSGMT
HSAAMASEILPGKTILEALNTDLVCDAINTAMRELFLQIVYGRTQTAFSEGGLPVGAGLEDLGKGLRSQVGTMYGTLAKG
PRYLEMAEGYVTDVALDEDKEIIGYKFVNLGKMMENIGKGMDANKALEEARGQYGRVADAAELMDPRHK
>Mature_229_residues
MYSKEVEEMCVVAKGPNHGPAPIPAEGKWVQSKEVTDISGLTHGIGWCAPQQGACKLTLNVKDGIIEEALVETIGCSGMT
HSAAMASEILPGKTILEALNTDLVCDAINTAMRELFLQIVYGRTQTAFSEGGLPVGAGLEDLGKGLRSQVGTMYGTLAKG
PRYLEMAEGYVTDVALDEDKEIIGYKFVNLGKMMENIGKGMDANKALEEARGQYGRVADAAELMDPRHK

Specific function: Unknown

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24509; Mature: 24509

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSKEVEEMCVVAKGPNHGPAPIPAEGKWVQSKEVTDISGLTHGIGWCAPQQGACKLTLN
CCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEE
VKDGIIEEALVETIGCSGMTHSAAMASEILPGKTILEALNTDLVCDAINTAMRELFLQIV
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YGRTQTAFSEGGLPVGAGLEDLGKGLRSQVGTMYGTLAKGPRYLEMAEGYVTDVALDEDK
HCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHEEEEECCCC
EIIGYKFVNLGKMMENIGKGMDANKALEEARGQYGRVADAAELMDPRHK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MYSKEVEEMCVVAKGPNHGPAPIPAEGKWVQSKEVTDISGLTHGIGWCAPQQGACKLTLN
CCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEE
VKDGIIEEALVETIGCSGMTHSAAMASEILPGKTILEALNTDLVCDAINTAMRELFLQIV
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YGRTQTAFSEGGLPVGAGLEDLGKGLRSQVGTMYGTLAKGPRYLEMAEGYVTDVALDEDK
HCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHEEEEECCCC
EIIGYKFVNLGKMMENIGKGMDANKALEEARGQYGRVADAAELMDPRHK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA