| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935389
Identifier: 187935389
GI number: 187935389
Start: 2504124
End: 2504489
Strand: Reverse
Name: 187935389
Synonym: CLL_A2416
Alternate gene names: NA
Gene position: 2504489-2504124 (Counterclockwise)
Preceding gene: 187934824
Following gene: 187935302
Centisome position: 65.9
GC content: 25.41
Gene sequence:
>366_bases ATGGAAAAATTAAGGAATCAAATTAATGATTTAAAGGTAAATTTATCTGAGATAAAAAGTGAAGAATATAAAAATTATTT TTCATCAATAGTATCAATTTTAGAAACTATGGATAGTAAAATTGAAGAATTAACTGTAAATGAGGAAACTATAGAAGAAA ATATAAGATTTATGGATGATGACTTAAGCGGTCTTCAAGATGAACTTTTTGAAGAAGTATCAATAGATGAACTAAGTGAA TTAGAAGATGAATATGTAGAAGCTACTTGTTGCCATTGTGGTAATACGGTTTTTGCAGAGCAATCAACTTTAAAAAATAA TAATGAAATTCCGTGTCCATATTGTAATAAGAATATTAAAGGATAA
Upstream 100 bases:
>100_bases TGGAAAGAGTTTAATCTCTTTATGTATTTAAAGTTTTAATACTAAATAAAGTTGCTAAGTTATTTCTTAGCAACTTTATT TATAAAAGGAAGTGAAAAAT
Downstream 100 bases:
>100_bases ATATTTAATGTCCATAGTTTTACTATGGCTTTTTTTATTCTTTAGGAAATTATATTACTAAAGAATATGTGGATAACTTA TAAAATACTGTAATTTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MEKLRNQINDLKVNLSEIKSEEYKNYFSSIVSILETMDSKIEELTVNEETIEENIRFMDDDLSGLQDELFEEVSIDELSE LEDEYVEATCCHCGNTVFAEQSTLKNNNEIPCPYCNKNIKG
Sequences:
>Translated_121_residues MEKLRNQINDLKVNLSEIKSEEYKNYFSSIVSILETMDSKIEELTVNEETIEENIRFMDDDLSGLQDELFEEVSIDELSE LEDEYVEATCCHCGNTVFAEQSTLKNNNEIPCPYCNKNIKG >Mature_121_residues MEKLRNQINDLKVNLSEIKSEEYKNYFSSIVSILETMDSKIEELTVNEETIEENIRFMDDDLSGLQDELFEEVSIDELSE LEDEYVEATCCHCGNTVFAEQSTLKNNNEIPCPYCNKNIKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13986; Mature: 13986
Theoretical pI: Translated: 3.85; Mature: 3.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLRNQINDLKVNLSEIKSEEYKNYFSSIVSILETMDSKIEELTVNEETIEENIRFMDD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH DLSGLQDELFEEVSIDELSELEDEYVEATCCHCGNTVFAEQSTLKNNNEIPCPYCNKNIK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC G C >Mature Secondary Structure MEKLRNQINDLKVNLSEIKSEEYKNYFSSIVSILETMDSKIEELTVNEETIEENIRFMDD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH DLSGLQDELFEEVSIDELSELEDEYVEATCCHCGNTVFAEQSTLKNNNEIPCPYCNKNIK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA