Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is spoIIIAA [H]

Identifier: 187935302

GI number: 187935302

Start: 2502785

End: 2503705

Strand: Reverse

Name: spoIIIAA [H]

Synonym: CLL_A2415

Alternate gene names: 187935302

Gene position: 2503705-2502785 (Counterclockwise)

Preceding gene: 187935389

Following gene: 187932419

Centisome position: 65.88

GC content: 26.06

Gene sequence:

>921_bases
ATGAAAGATGATAGTGAGTTTTTAAATATATTTCCAAGTAATATATTCAATGTACTTAAAGATAAATGTAAACTAGAACA
ACTTTATGAAATAAGGATAAAAATAGATAAACCTATCATAGTTTATTCTAATAAAGGAGAATCGATTGTAAATTATAATT
CATCAAAGGAAGAGATGAAATCAATAATACAAAAAATATCTAATTATTCACTATATGCTTATGAAGAAGATATAAAACAA
GGTTTTATAACAATTAAAGGTGGACATAGAATAGGTATTGCTGGCGAATGTGTTATGTGCAATGGTGAAGTAAAAACTAT
TAGAAATATATCATCTATAAATGTTAGATTTTGCAGAGAAGTTATAGGATGTTCTAATAAAATAATGAAATATATAGTTA
GTGGAGATAGAATTTATAACACAATAATTATTTCTCCACCTAAATGTGGAAAGACAACAATTTTAAGAGATATATCTAGG
AACATATCAAATGGAATGAAATCATTGGGCTTAAATGGTAAAAAAGTTTCTGTAATTGACGAAAGAAGTGAAATTGGAGC
TTGTTACTTTGGAGTTCCTCAAAGTGATTTAGGAATTAGAACAGATATTTTAGATAATTGTTTGAAAAAAGAGGGAATGA
TTATGTCAATAAGAAGTTTATCACCTGAGGTATTAATTTGTGATGAAATTGGTACTAAAGGAGATATCGAAGCATTAATT
ATGGCATTTAATTCTGGAGTAAACATAATTACAAGTATTCATGGATTTACAATTGATGATATTTATAAACGTAAAGTATT
TAAAGAGCTTATTGATAATCAAATACTTGAAAGAGCTATTATTTTAAGTTCAAGAGAAGGGGTAGGCACTATAGAAAAGG
TTTATAAATTAAGAGGAGAAGAAAAAATATGCTTAAATTAG

Upstream 100 bases:

>100_bases
TATGTAATTTAATTTTACATATCTTTTTTTATTTAACAGTAATATTTTAATTTTTATATAAATATTAATAACTAAGAAAA
ACATTAGAGGAGGAAGTGAG

Downstream 100 bases:

>100_bases
TACTTATATTTATGCTATTTGTAACGGCTTCTTATATTGGTTTTTTATATGGTGAAACTTTTAGAAAAAGATATATTCAG
CTTAAAGAAATTTTAAAAAA

Product: stage III sporulation protein AA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKDDSEFLNIFPSNIFNVLKDKCKLEQLYEIRIKIDKPIIVYSNKGESIVNYNSSKEEMKSIIQKISNYSLYAYEEDIKQ
GFITIKGGHRIGIAGECVMCNGEVKTIRNISSINVRFCREVIGCSNKIMKYIVSGDRIYNTIIISPPKCGKTTILRDISR
NISNGMKSLGLNGKKVSVIDERSEIGACYFGVPQSDLGIRTDILDNCLKKEGMIMSIRSLSPEVLICDEIGTKGDIEALI
MAFNSGVNIITSIHGFTIDDIYKRKVFKELIDNQILERAIILSSREGVGTIEKVYKLRGEEKICLN

Sequences:

>Translated_306_residues
MKDDSEFLNIFPSNIFNVLKDKCKLEQLYEIRIKIDKPIIVYSNKGESIVNYNSSKEEMKSIIQKISNYSLYAYEEDIKQ
GFITIKGGHRIGIAGECVMCNGEVKTIRNISSINVRFCREVIGCSNKIMKYIVSGDRIYNTIIISPPKCGKTTILRDISR
NISNGMKSLGLNGKKVSVIDERSEIGACYFGVPQSDLGIRTDILDNCLKKEGMIMSIRSLSPEVLICDEIGTKGDIEALI
MAFNSGVNIITSIHGFTIDDIYKRKVFKELIDNQILERAIILSSREGVGTIEKVYKLRGEEKICLN
>Mature_306_residues
MKDDSEFLNIFPSNIFNVLKDKCKLEQLYEIRIKIDKPIIVYSNKGESIVNYNSSKEEMKSIIQKISNYSLYAYEEDIKQ
GFITIKGGHRIGIAGECVMCNGEVKTIRNISSINVRFCREVIGCSNKIMKYIVSGDRIYNTIIISPPKCGKTTILRDISR
NISNGMKSLGLNGKKVSVIDERSEIGACYFGVPQSDLGIRTDILDNCLKKEGMIMSIRSLSPEVLICDEIGTKGDIEALI
MAFNSGVNIITSIHGFTIDDIYKRKVFKELIDNQILERAIILSSREGVGTIEKVYKLRGEEKICLN

Specific function: Unknown

COG id: COG3854

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014217 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34422; Mature: 34422

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDDSEFLNIFPSNIFNVLKDKCKLEQLYEIRIKIDKPIIVYSNKGESIVNYNSSKEEMK
CCCCHHHHHHCHHHHHHHHHHHHHHHHHEEEEEEECCEEEEECCCCCEEEECCCCHHHHH
SIIQKISNYSLYAYEEDIKQGFITIKGGHRIGIAGECVMCNGEVKTIRNISSINVRFCRE
HHHHHHCCCEEEEEHHHHHCCEEEEECCEEECCCCCEEEECCCHHHHHCHHHHHHHHHHH
VIGCSNKIMKYIVSGDRIYNTIIISPPKCGKTTILRDISRNISNGMKSLGLNGKKVSVID
HHCCHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
ERSEIGACYFGVPQSDLGIRTDILDNCLKKEGMIMSIRSLSPEVLICDEIGTKGDIEALI
CCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCHHHHH
MAFNSGVNIITSIHGFTIDDIYKRKVFKELIDNQILERAIILSSREGVGTIEKVYKLRGE
HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
EKICLN
CCCCCC
>Mature Secondary Structure
MKDDSEFLNIFPSNIFNVLKDKCKLEQLYEIRIKIDKPIIVYSNKGESIVNYNSSKEEMK
CCCCHHHHHHCHHHHHHHHHHHHHHHHHEEEEEEECCEEEEECCCCCEEEECCCCHHHHH
SIIQKISNYSLYAYEEDIKQGFITIKGGHRIGIAGECVMCNGEVKTIRNISSINVRFCRE
HHHHHHCCCEEEEEHHHHHCCEEEEECCEEECCCCCEEEECCCHHHHHCHHHHHHHHHHH
VIGCSNKIMKYIVSGDRIYNTIIISPPKCGKTTILRDISRNISNGMKSLGLNGKKVSVID
HHCCHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
ERSEIGACYFGVPQSDLGIRTDILDNCLKKEGMIMSIRSLSPEVLICDEIGTKGDIEALI
CCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCHHHHH
MAFNSGVNIITSIHGFTIDDIYKRKVFKELIDNQILERAIILSSREGVGTIEKVYKLRGE
HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
EKICLN
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1766372; 8969508; 9384377 [H]