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The map label for this gene is xerC [H]

Identifier: 187935337

GI number: 187935337

Start: 2484830

End: 2485843

Strand: Reverse

Name: xerC [H]

Synonym: CLL_A2394

Alternate gene names: 187935337

Gene position: 2485843-2484830 (Counterclockwise)

Preceding gene: 187934141

Following gene: 187932804

Centisome position: 65.41

GC content: 24.26

Gene sequence:

>1014_bases
TTGCCCAAAATTACGAAAAAGAATAAAGGTTTTGATGAAATAATACAAGATTTTTTAGATTATTGCAATTATAAAAATTT
GAGTTTAAAAACTATAAAATCATATCATCAAACATTGACATTATTCTTTAAATATTTAGAGGAAGAAAAGGATATAAAAA
ATGTTAATAAGATTGGAAAACAAATTGTAGAAGAATATATTAAATTCACTCAAGAAAGAGGTAAATATTCATTTGTAGCA
TCTATAGATGGTATGGTAAAAGCTAATATAGATAAAAGAACTGATATAGGAGAAAAAGTATCAACATCAACATTGAATAA
TTACTTAAGGAATATTAAGGTGTTTTTTAGCTATTTAGAAGAAAATCAAATTATAAGAGAAAATACAGTTAAAAAATGTA
AGTATATAAAAAATGAACGAAAATCTAAAGAACAATTAACTGACAATGAATTTAACAAATTAATTAAATCAATGGATTTG
ACAAAATTTCACGAGTATAGAGATTATGTAATAACAAATTTAATTTTCGATACTGGAATGAGATTAAATGAAACTTTAAA
CTTGACTATTAATGATGTTGATTTTACAAGACGAACTATAATGATTGATAGTCAAATTAGTAAAGGACGTAAAGATAGAG
TAGTTTTTTATAGTCAAACAATGTCAAAATTATTGCAAAGATGGTTAAGATTTAAAGATACAATGCAAGAAACTGAATTG
TTATTTCCAACTCAAAGAACAAATGGAGTATTAAGTGTTTCTAATTTTGAAAGGAATTTTAGAATTTATCTAAAAAGAGC
AAAAATTAATAAATCAATTACTCCACACGGACTAAGGAATAACTTCGCTAGACGTTTCCTACTCGCATCAAGTGATATTC
ATACTTTAAGTAAAATATTAGGACATAGTTCTGTAACAGTAACAGAAAAAGCTTATTTAGATTTAATGGATGAAGATTTT
AGAAAGAAATATCAGAGATATTCTCCATTGGAAAATATGAAAGAGAGATATTAA

Upstream 100 bases:

>100_bases
GGATTTTGATGTTTTATGTCTATAAATATAATATTAATTTGTTATGTAAACACCTTTTATTTATTAGTTTAAATAATTAA
TAAATAGGAGGTGTTTTTTG

Downstream 100 bases:

>100_bases
AAGAAACGTTAAAACAATTAAATATTAATAAATAAAAAAATAACTGATACTCTGACAAAGTACCAGTTACCAAAACTTAA
TATAGTTTTTATAAACTTTT

Product: DNA integration/recombination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MPKITKKNKGFDEIIQDFLDYCNYKNLSLKTIKSYHQTLTLFFKYLEEEKDIKNVNKIGKQIVEEYIKFTQERGKYSFVA
SIDGMVKANIDKRTDIGEKVSTSTLNNYLRNIKVFFSYLEENQIIRENTVKKCKYIKNERKSKEQLTDNEFNKLIKSMDL
TKFHEYRDYVITNLIFDTGMRLNETLNLTINDVDFTRRTIMIDSQISKGRKDRVVFYSQTMSKLLQRWLRFKDTMQETEL
LFPTQRTNGVLSVSNFERNFRIYLKRAKINKSITPHGLRNNFARRFLLASSDIHTLSKILGHSSVTVTEKAYLDLMDEDF
RKKYQRYSPLENMKERY

Sequences:

>Translated_337_residues
MPKITKKNKGFDEIIQDFLDYCNYKNLSLKTIKSYHQTLTLFFKYLEEEKDIKNVNKIGKQIVEEYIKFTQERGKYSFVA
SIDGMVKANIDKRTDIGEKVSTSTLNNYLRNIKVFFSYLEENQIIRENTVKKCKYIKNERKSKEQLTDNEFNKLIKSMDL
TKFHEYRDYVITNLIFDTGMRLNETLNLTINDVDFTRRTIMIDSQISKGRKDRVVFYSQTMSKLLQRWLRFKDTMQETEL
LFPTQRTNGVLSVSNFERNFRIYLKRAKINKSITPHGLRNNFARRFLLASSDIHTLSKILGHSSVTVTEKAYLDLMDEDF
RKKYQRYSPLENMKERY
>Mature_336_residues
PKITKKNKGFDEIIQDFLDYCNYKNLSLKTIKSYHQTLTLFFKYLEEEKDIKNVNKIGKQIVEEYIKFTQERGKYSFVAS
IDGMVKANIDKRTDIGEKVSTSTLNNYLRNIKVFFSYLEENQIIRENTVKKCKYIKNERKSKEQLTDNEFNKLIKSMDLT
KFHEYRDYVITNLIFDTGMRLNETLNLTINDVDFTRRTIMIDSQISKGRKDRVVFYSQTMSKLLQRWLRFKDTMQETELL
FPTQRTNGVLSVSNFERNFRIYLKRAKINKSITPHGLRNNFARRFLLASSDIHTLSKILGHSSVTVTEKAYLDLMDEDFR
KKYQRYSPLENMKERY

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=278, Percent_Identity=23.021582733813, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI1789261, Length=321, Percent_Identity=22.4299065420561, Blast_Score=85, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 40228; Mature: 40097

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKITKKNKGFDEIIQDFLDYCNYKNLSLKTIKSYHQTLTLFFKYLEEEKDIKNVNKIGK
CCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIVEEYIKFTQERGKYSFVASIDGMVKANIDKRTDIGEKVSTSTLNNYLRNIKVFFSYLE
HHHHHHHHHHHHCCCEEEEEECCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ENQIIRENTVKKCKYIKNERKSKEQLTDNEFNKLIKSMDLTKFHEYRDYVITNLIFDTGM
HCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLNETLNLTINDVDFTRRTIMIDSQISKGRKDRVVFYSQTMSKLLQRWLRFKDTMQETEL
CCCCEEEEEEECCCCCHHEEEEECHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
LFPTQRTNGVLSVSNFERNFRIYLKRAKINKSITPHGLRNNFARRFLLASSDIHTLSKIL
CCCCCCCCCEEEECCCCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
GHSSVTVTEKAYLDLMDEDFRKKYQRYSPLENMKERY
CCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure 
PKITKKNKGFDEIIQDFLDYCNYKNLSLKTIKSYHQTLTLFFKYLEEEKDIKNVNKIGK
CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIVEEYIKFTQERGKYSFVASIDGMVKANIDKRTDIGEKVSTSTLNNYLRNIKVFFSYLE
HHHHHHHHHHHHCCCEEEEEECCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ENQIIRENTVKKCKYIKNERKSKEQLTDNEFNKLIKSMDLTKFHEYRDYVITNLIFDTGM
HCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLNETLNLTINDVDFTRRTIMIDSQISKGRKDRVVFYSQTMSKLLQRWLRFKDTMQETEL
CCCCEEEEEEECCCCCHHEEEEECHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
LFPTQRTNGVLSVSNFERNFRIYLKRAKINKSITPHGLRNNFARRFLLASSDIHTLSKIL
CCCCCCCCCEEEECCCCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
GHSSVTVTEKAYLDLMDEDFRKKYQRYSPLENMKERY
CCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA