| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is spo0A [H]
Identifier: 187934141
GI number: 187934141
Start: 2486005
End: 2486823
Strand: Reverse
Name: spo0A [H]
Synonym: CLL_A2395
Alternate gene names: 187934141
Gene position: 2486823-2486005 (Counterclockwise)
Preceding gene: 187935751
Following gene: 187935337
Centisome position: 65.44
GC content: 29.18
Gene sequence:
>819_bases ATGGAAGATAAAAAAATATCTGTACTTATTGCTGATGATAATAAGGAATTTTGCAGTATTTTAAACGATTATTTATTAAA TCAAAGAAATATAATAGTAACAGGAATAGCAAAAGATGGTAGGGAAGCTTTAGATTTAGTGGTTGAAAAGAAACCAGATT TATTAATTCTAGATATAATAATGCCACATTTAGACGGTTTAGGTGTTTTAGAAAGATTAAATACTATGAATTTAGAAAAA ATGCCTAAGATTATAATCTTATCTGCAGTAGGTCAAGATAAAATTACACAACAGGCAATAACATTAGGAGCAGACTATTA TACTGTTAAGCCATTTGATATGGAAGTATTTACAAAGAGAATAAGAGAAATGTTCAATAGTGAAACAGACAACCAAAGTA TAAGAAGAACATCATCACAACCTATGATTTCTTATACTAGTGAATGTCAAGATAATAAAGGAAGTTTAGATTTAGAAACA GAAATAACAAATATTATACATGAAATTGGTGTACCGGCTCATATAAAGGGATATATGTATTTAAGGGAAGCAATAACTAT GGTTGTTAATGATATAGAATTATTATCAGCTGTAACAAAGGAATTATATCCATCAATAGCTAAGAAATATAACACAACAG CTTCAAGAGTGGAAAGAGCAATAAGACATGCTATAGAAGTTGCTTGGGGCAGAGGCCAAATAGAAGCTATAAACAAGCTA TTTGGATATACTATACACAATGATAAGGGCAAGCCTACTAATAGCGAATTTATAGCAATTATTGCAGATAAGCTAAGACT TAAAAATAAAGTTAGCTAA
Upstream 100 bases:
>100_bases TATTTAGTGATAAGTTTAGCTATTAAAAGTAGTTTATGATGTTATAGAGATTGTGATTCAAATAGTAACATAATTAGGTT TATGAAGGAGAGGAAAAAGC
Downstream 100 bases:
>100_bases AAGGCTTGGTTATGCGATTCTTGTGAATGGCGATAGCGATAAACTCTATAAAAATCGCTATGGATTTTGATGTTTTATGT CTATAAATATAATATTAATT
Product: sporulation transcription factor Spo0A
Products: protein L-glutamate+ methanol; methanol; Tapglu; methanol; Targlu; Trgglu; Tsrglu; NH3; protein-L-glutamate [C]
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MEDKKISVLIADDNKEFCSILNDYLLNQRNIIVTGIAKDGREALDLVVEKKPDLLILDIIMPHLDGLGVLERLNTMNLEK MPKIIILSAVGQDKITQQAITLGADYYTVKPFDMEVFTKRIREMFNSETDNQSIRRTSSQPMISYTSECQDNKGSLDLET EITNIIHEIGVPAHIKGYMYLREAITMVVNDIELLSAVTKELYPSIAKKYNTTASRVERAIRHAIEVAWGRGQIEAINKL FGYTIHNDKGKPTNSEFIAIIADKLRLKNKVS
Sequences:
>Translated_272_residues MEDKKISVLIADDNKEFCSILNDYLLNQRNIIVTGIAKDGREALDLVVEKKPDLLILDIIMPHLDGLGVLERLNTMNLEK MPKIIILSAVGQDKITQQAITLGADYYTVKPFDMEVFTKRIREMFNSETDNQSIRRTSSQPMISYTSECQDNKGSLDLET EITNIIHEIGVPAHIKGYMYLREAITMVVNDIELLSAVTKELYPSIAKKYNTTASRVERAIRHAIEVAWGRGQIEAINKL FGYTIHNDKGKPTNSEFIAIIADKLRLKNKVS >Mature_272_residues MEDKKISVLIADDNKEFCSILNDYLLNQRNIIVTGIAKDGREALDLVVEKKPDLLILDIIMPHLDGLGVLERLNTMNLEK MPKIIILSAVGQDKITQQAITLGADYYTVKPFDMEVFTKRIREMFNSETDNQSIRRTSSQPMISYTSECQDNKGSLDLET EITNIIHEIGVPAHIKGYMYLREAITMVVNDIELLSAVTKELYPSIAKKYNTTASRVERAIRHAIEVAWGRGQIEAINKL FGYTIHNDKGKPTNSEFIAIIADKLRLKNKVS
Specific function: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the ex
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR014879 - InterPro: IPR012052 - InterPro: IPR011991 - ProDom: PD010908 [H]
Pfam domain/function: PF00072 Response_reg; PF08769 Spo0A_C [H]
EC number: 3.1.1.61 [C]
Molecular weight: Translated: 30786; Mature: 30786
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKKISVLIADDNKEFCSILNDYLLNQRNIIVTGIAKDGREALDLVVEKKPDLLILDII CCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEHEEH MPHLDGLGVLERLNTMNLEKMPKIIILSAVGQDKITQQAITLGADYYTVKPFDMEVFTKR HHCCCCHHHHHHHHHCCHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHH IREMFNSETDNQSIRRTSSQPMISYTSECQDNKGSLDLETEITNIIHEIGVPAHIKGYMY HHHHHCCCCCCHHHHHCCCCCCEEEHHHCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHH LREAITMVVNDIELLSAVTKELYPSIAKKYNTTASRVERAIRHAIEVAWGRGQIEAINKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH FGYTIHNDKGKPTNSEFIAIIADKLRLKNKVS HCEEEECCCCCCCCCCEEEEEHHHHHHHCCCC >Mature Secondary Structure MEDKKISVLIADDNKEFCSILNDYLLNQRNIIVTGIAKDGREALDLVVEKKPDLLILDII CCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEHEEH MPHLDGLGVLERLNTMNLEKMPKIIILSAVGQDKITQQAITLGADYYTVKPFDMEVFTKR HHCCCCHHHHHHHHHCCHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHH IREMFNSETDNQSIRRTSSQPMISYTSECQDNKGSLDLETEITNIIHEIGVPAHIKGYMY HHHHHCCCCCCHHHHHCCCCCCEEEHHHCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHH LREAITMVVNDIELLSAVTKELYPSIAKKYNTTASRVERAIRHAIEVAWGRGQIEAINKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH FGYTIHNDKGKPTNSEFIAIIADKLRLKNKVS HCEEEECCCCCCCCCCEEEEEHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Protein L-glutamate Omethyl ester; Tapglu-Me; H2O; Targlu-Me; Trgglu-Me; Tsrglu-Me; Tsrgln; Trggln; Targln; Tapgln; protein-L-glutamine [C]
Specific reaction: Protein L-glutamate Omethyl ester + H2O = protein L-glutamate+ methanol H2O + Tapglu-Me = methanol + Tapglu H2O + Targlu-Me = methanol + Targlu H2O + Trgglu-Me = methanol + Trgglu H2O + Tsrglu-Me = methanol + Tsrglu H2O + Tsrgln = NH3 + Tsrglu H2O + Trggl
General reaction: Hydrolysis of carboxylic ester [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7885226 [H]