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The map label for this gene is oppC [H]

Identifier: 187935328

GI number: 187935328

Start: 2583575

End: 2584519

Strand: Reverse

Name: oppC [H]

Synonym: CLL_A2491

Alternate gene names: 187935328

Gene position: 2584519-2583575 (Counterclockwise)

Preceding gene: 187934323

Following gene: 187932383

Centisome position: 68.01

GC content: 30.26

Gene sequence:

>945_bases
ATGGAACAAGAAATAAATTTAAAAAAGGACTTATTTACTCCTCTGACTGAAGATGAAAAAAAGATAGAGGTTATTGTAAG
ACCGAGTGTTGGGTATTGGAAAGATGCATGGAACAGATTAAAGAAAAACAAAATGGCGATTATATCTTTATTAGCAATAA
TAATAATAATGTTAGCCGCAATTTTTGTTCCAATGACATCAAAATATTCTTATGATCAAAATATGTTATCACAAGTTAAT
TTAAAACCATCAGCAGAGCATTGGTTTGGAACAGACCAATTAGGAAGAGATATATTCGTAAGAGTATTCTTTGGAGCTAG
ATATTCATTAATAATTGGTGTAGCCGCAGCATTTATTAACTTATTTATTGGTGTATTATATGGTGGTATATCAGGATTTT
GTGGTGGAAAAATAGATAATTTAATGATGAGAATCGTTGATGTATTATATTCAATTCCATTAATCATATATGTAATAATT
TTAATGACTATATTAAATAAGCCAGGAAGTGGCGGAAGTGGTCTTTCAACTATTGTATTAGCACTTTCAATATCTTATTG
GATTGGAATGGCAAGAATAGTAAGGGGAGACGTTTTACAATTAAAACAACAAGAATTTGTTCTTGCAGCAAAAGCTTTAG
GAGCATCTAATACTAGAATTTTAATAAGACATTTAATACCAAATTGTATTGGTTCAATAATGGTTACAATGACATTACTT
ATACCACAAGCTATATTTACAGAGGCATTTTTAAGCTTCATAGGATTAGGACTTGTTCCGCCTAAAGCATCATTAGGTAC
TTTAGCTAATGAAGCTATGAAAGCAATATATCAATATCCTTATCAATTGCTATTCCCAGCAGTGGCAATTTGTTTAATAA
TACTAGCATTTAATCTTTTTGGAGATGGATTAAGTGAAGCACTAGATCCTAAGAATAAGAGATAG

Upstream 100 bases:

>100_bases
ACTTATAATGTTCAACTTCATAGTTGATATTATGTATGTAGTAATTGATCCAAGAATAAAATTAGAGGATGCAGAAGTTT
AGTAAAGGGGAGAAAAAAGC

Downstream 100 bases:

>100_bases
GGGGAAGATATAATGGAAAAATTATTAGAAGTAAAAGATTTAAAAACTTCCTTTCAAACTAATGTAGGAGAAGTGCATGC
AGTAAGAGGTGTATCTTTTT

Product: oligopeptide transport system permease protein OppC

Products: NA

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MEQEINLKKDLFTPLTEDEKKIEVIVRPSVGYWKDAWNRLKKNKMAIISLLAIIIIMLAAIFVPMTSKYSYDQNMLSQVN
LKPSAEHWFGTDQLGRDIFVRVFFGARYSLIIGVAAAFINLFIGVLYGGISGFCGGKIDNLMMRIVDVLYSIPLIIYVII
LMTILNKPGSGGSGLSTIVLALSISYWIGMARIVRGDVLQLKQQEFVLAAKALGASNTRILIRHLIPNCIGSIMVTMTLL
IPQAIFTEAFLSFIGLGLVPPKASLGTLANEAMKAIYQYPYQLLFPAVAICLIILAFNLFGDGLSEALDPKNKR

Sequences:

>Translated_314_residues
MEQEINLKKDLFTPLTEDEKKIEVIVRPSVGYWKDAWNRLKKNKMAIISLLAIIIIMLAAIFVPMTSKYSYDQNMLSQVN
LKPSAEHWFGTDQLGRDIFVRVFFGARYSLIIGVAAAFINLFIGVLYGGISGFCGGKIDNLMMRIVDVLYSIPLIIYVII
LMTILNKPGSGGSGLSTIVLALSISYWIGMARIVRGDVLQLKQQEFVLAAKALGASNTRILIRHLIPNCIGSIMVTMTLL
IPQAIFTEAFLSFIGLGLVPPKASLGTLANEAMKAIYQYPYQLLFPAVAICLIILAFNLFGDGLSEALDPKNKR
>Mature_314_residues
MEQEINLKKDLFTPLTEDEKKIEVIVRPSVGYWKDAWNRLKKNKMAIISLLAIIIIMLAAIFVPMTSKYSYDQNMLSQVN
LKPSAEHWFGTDQLGRDIFVRVFFGARYSLIIGVAAAFINLFIGVLYGGISGFCGGKIDNLMMRIVDVLYSIPLIIYVII
LMTILNKPGSGGSGLSTIVLALSISYWIGMARIVRGDVLQLKQQEFVLAAKALGASNTRILIRHLIPNCIGSIMVTMTLL
IPQAIFTEAFLSFIGLGLVPPKASLGTLANEAMKAIYQYPYQLLFPAVAICLIILAFNLFGDGLSEALDPKNKR

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=282, Percent_Identity=42.1985815602837, Blast_Score=224, Evalue=7e-60,
Organism=Escherichia coli, GI1787498, Length=309, Percent_Identity=40.7766990291262, Blast_Score=212, Evalue=3e-56,
Organism=Escherichia coli, GI1789889, Length=231, Percent_Identity=38.0952380952381, Blast_Score=171, Evalue=8e-44,
Organism=Escherichia coli, GI1787760, Length=272, Percent_Identity=35.6617647058824, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1789964, Length=287, Percent_Identity=32.7526132404181, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1788505, Length=232, Percent_Identity=30.6034482758621, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1787549, Length=292, Percent_Identity=27.7397260273973, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34714; Mature: 34714

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQEINLKKDLFTPLTEDEKKIEVIVRPSVGYWKDAWNRLKKNKMAIISLLAIIIIMLAA
CCCCCCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFVPMTSKYSYDQNMLSQVNLKPSAEHWFGTDQLGRDIFVRVFFGARYSLIIGVAAAFIN
HHHHCCCCCCCCHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFIGVLYGGISGFCGGKIDNLMMRIVDVLYSIPLIIYVIILMTILNKPGSGGSGLSTIVL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
ALSISYWIGMARIVRGDVLQLKQQEFVLAAKALGASNTRILIRHLIPNCIGSIMVTMTLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
IPQAIFTEAFLSFIGLGLVPPKASLGTLANEAMKAIYQYPYQLLFPAVAICLIILAFNLF
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDGLSEALDPKNKR
CCCHHHHCCCCCCC
>Mature Secondary Structure
MEQEINLKKDLFTPLTEDEKKIEVIVRPSVGYWKDAWNRLKKNKMAIISLLAIIIIMLAA
CCCCCCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFVPMTSKYSYDQNMLSQVNLKPSAEHWFGTDQLGRDIFVRVFFGARYSLIIGVAAAFIN
HHHHCCCCCCCCHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFIGVLYGGISGFCGGKIDNLMMRIVDVLYSIPLIIYVIILMTILNKPGSGGSGLSTIVL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
ALSISYWIGMARIVRGDVLQLKQQEFVLAAKALGASNTRILIRHLIPNCIGSIMVTMTLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
IPQAIFTEAFLSFIGLGLVPPKASLGTLANEAMKAIYQYPYQLLFPAVAICLIILAFNLF
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDGLSEALDPKNKR
CCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]