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The map label for this gene is hypC [H]

Identifier: 187935094

GI number: 187935094

Start: 2083661

End: 2083876

Strand: Reverse

Name: hypC [H]

Synonym: CLL_A2003

Alternate gene names: 187935094

Gene position: 2083876-2083661 (Counterclockwise)

Preceding gene: 187932358

Following gene: 187933842

Centisome position: 54.83

GC content: 31.48

Gene sequence:

>216_bases
ATGTGCGTGGCTATTCCGGGACAAATTATAGAAATTTTAGGGGAAGAATCTTTGGTTAAATTTGGAGGGATTAAAAAGCT
TATCAATACATCTTTAGTTGAAGATCTGAATGTTGGTGATTATGTTCTTGTTCATGTTGGGTGTGCAATAGATAAATTAG
AAAAAGAAGAAGCAGAAGCAACATTAGAAATTTTTTATGAGTTACTTAAAAACTAG

Upstream 100 bases:

>100_bases
ACGGAGAGATACCTTGTAATGATAGTGGAATTTCATTGGGTCAGCTTATTATAGCAAATGAGTTAATAAAAAGTCACAAT
TAAAATTGAGGTGAAGAGAT

Downstream 100 bases:

>100_bases
GAAATGGCTAGAAAATTCATATGTTTAATAAATACTTTAAGTTTTAAATATGTGTTGATATATGCAATATGCCAAATAGT
ATTGTAATTGATTTTTAGAA

Product: hydrogenase assembly chaperone HypC/HupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MCVAIPGQIIEILGEESLVKFGGIKKLINTSLVEDLNVGDYVLVHVGCAIDKLEKEEAEATLEIFYELLKN

Sequences:

>Translated_71_residues
MCVAIPGQIIEILGEESLVKFGGIKKLINTSLVEDLNVGDYVLVHVGCAIDKLEKEEAEATLEIFYELLKN
>Mature_71_residues
MCVAIPGQIIEILGEESLVKFGGIKKLINTSLVEDLNVGDYVLVHVGCAIDKLEKEEAEATLEIFYELLKN

Specific function: May Have A Specific Role In The Maturation Of The Large Subunits Of Hyd1 And Hyd2. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 7820; Mature: 7820

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCVAIPGQIIEILGEESLVKFGGIKKLINTSLVEDLNVGDYVLVHVGCAIDKLEKEEAEA
CEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH
TLEIFYELLKN
HHHHHHHHHCC
>Mature Secondary Structure
MCVAIPGQIIEILGEESLVKFGGIKKLINTSLVEDLNVGDYVLVHVGCAIDKLEKEEAEA
CEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH
TLEIFYELLKN
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8486288 [H]