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The map label for this gene is 187934941

Identifier: 187934941

GI number: 187934941

Start: 2342847

End: 2344043

Strand: Reverse

Name: 187934941

Synonym: CLL_A2257

Alternate gene names: NA

Gene position: 2344043-2342847 (Counterclockwise)

Preceding gene: 187933949

Following gene: 187935549

Centisome position: 61.68

GC content: 31.5

Gene sequence:

>1197_bases
ATGTTATCAAAAGATATATTAAGACAACAATTAACTGAAAAATTCGGAGCAGCAATGCAATCTGAAAATCAAGAGGATAT
GATTAATGCTTTTGTTGAATTTGCTACAGGAGTACAACAAGAAGTACTTGATGATTTCAAAGTATATCAAGAAACGCAAG
ACAAAGAAATACTTCAAAAGAGAGGTATACACCAATTAACTCAAAAGGAAACTAAGTTCTATCAAGGTTGGATTGATGCA
GCTAAAAGCTCAAATCCTAGACAAGCAATAACTAATCTTGATATAGCATTACCTGAAACAGTAATTGATAATGTAATGGT
TGATATGAGAGCAGAACATCAATTATTAGAAATGATTGATTTTCAAAACATGACTGCATTAACTAAGATGCTTATGAATA
AAAAAGGAATTCAATTAGCGAAATGGGGAACTATTGGTTCAACAATTACAGAAGAATTAGAAGGAGCTATTGGAAAGCTT
GACTTAAGTTTAAATAAATTAACAGCATTTATGCCAGTAGCAAAGGATATGCTTTTAGTTGGTCCACAATGGGTAGATGC
ATATGTAAGAGCTGTACTTTCAGAAGCAGTTGCATATGGACTTGAAGAAGGAATTATAAATGGAACAGGAAAAGAGATGC
CTATAGGCATGAATAGAGATATTCATGAAGGAGTAAGTGTAACTGGTGGAGTATATCCTAAGAAAACTTCTGTTGCAATT
AAAGATTTATCTCCTAAGACATTTGGAACTTTATTAGCAACATTGGCTAAAGATCCTGTAGACGAAAAGAAAGCGAGAAC
AATTTCAGACCTTGTATTAATAGTTAATCCTTTTGACTATTACAAAAAGGTTATGCCAGCAACTACTATTCAATTACAAG
ATGGTACTTATAAAAATAATGTATTACCTTATCCAACTACTATTGTACAATCAACACAAGTTGCAGAAGGTGAAGCAATA
CTTGGACTTGCTAAAAAGTATGCAATGGGAATAGGAACAGGAAATAAAGAAGGTAAAATTGAGTATTCAGATGAATATAA
GTTCTTAGAAGATGAAAGATACTACATCATAAAGCTTATTGGTAATGGTCAAGCTTTAGATGATAATGCATTTATATTAT
TAAATATTAGTGGTTTAGAAGATTTAACTTACAATGTAACAGTAAAGGGAACTGTTAAAACTAAAGAACAGGCTTAA

Upstream 100 bases:

>100_bases
AGGCTGAAACTCCTATAAAAGTACCTAAGCAATTTGAAAAACAAAGAAATAATTATGAAATATTAAGACAAAAATTTATG
AAGAAAGAAGGAAATAAATA

Downstream 100 bases:

>100_bases
TTGAGGTGATTTAAATGTCAGAAGATGAATTAAAGGTATTATTACAAGATGTAAAAGATTATCTTCATATAAGCTGGTAT
GATGAAAAAACAGATAAAAA

Product: major capsid protein a

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MLSKDILRQQLTEKFGAAMQSENQEDMINAFVEFATGVQQEVLDDFKVYQETQDKEILQKRGIHQLTQKETKFYQGWIDA
AKSSNPRQAITNLDIALPETVIDNVMVDMRAEHQLLEMIDFQNMTALTKMLMNKKGIQLAKWGTIGSTITEELEGAIGKL
DLSLNKLTAFMPVAKDMLLVGPQWVDAYVRAVLSEAVAYGLEEGIINGTGKEMPIGMNRDIHEGVSVTGGVYPKKTSVAI
KDLSPKTFGTLLATLAKDPVDEKKARTISDLVLIVNPFDYYKKVMPATTIQLQDGTYKNNVLPYPTTIVQSTQVAEGEAI
LGLAKKYAMGIGTGNKEGKIEYSDEYKFLEDERYYIIKLIGNGQALDDNAFILLNISGLEDLTYNVTVKGTVKTKEQA

Sequences:

>Translated_398_residues
MLSKDILRQQLTEKFGAAMQSENQEDMINAFVEFATGVQQEVLDDFKVYQETQDKEILQKRGIHQLTQKETKFYQGWIDA
AKSSNPRQAITNLDIALPETVIDNVMVDMRAEHQLLEMIDFQNMTALTKMLMNKKGIQLAKWGTIGSTITEELEGAIGKL
DLSLNKLTAFMPVAKDMLLVGPQWVDAYVRAVLSEAVAYGLEEGIINGTGKEMPIGMNRDIHEGVSVTGGVYPKKTSVAI
KDLSPKTFGTLLATLAKDPVDEKKARTISDLVLIVNPFDYYKKVMPATTIQLQDGTYKNNVLPYPTTIVQSTQVAEGEAI
LGLAKKYAMGIGTGNKEGKIEYSDEYKFLEDERYYIIKLIGNGQALDDNAFILLNISGLEDLTYNVTVKGTVKTKEQA
>Mature_398_residues
MLSKDILRQQLTEKFGAAMQSENQEDMINAFVEFATGVQQEVLDDFKVYQETQDKEILQKRGIHQLTQKETKFYQGWIDA
AKSSNPRQAITNLDIALPETVIDNVMVDMRAEHQLLEMIDFQNMTALTKMLMNKKGIQLAKWGTIGSTITEELEGAIGKL
DLSLNKLTAFMPVAKDMLLVGPQWVDAYVRAVLSEAVAYGLEEGIINGTGKEMPIGMNRDIHEGVSVTGGVYPKKTSVAI
KDLSPKTFGTLLATLAKDPVDEKKARTISDLVLIVNPFDYYKKVMPATTIQLQDGTYKNNVLPYPTTIVQSTQVAEGEAI
LGLAKKYAMGIGTGNKEGKIEYSDEYKFLEDERYYIIKLIGNGQALDDNAFILLNISGLEDLTYNVTVKGTVKTKEQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44228; Mature: 44228

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKDILRQQLTEKFGAAMQSENQEDMINAFVEFATGVQQEVLDDFKVYQETQDKEILQK
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHH
RGIHQLTQKETKFYQGWIDAAKSSNPRQAITNLDIALPETVIDNVMVDMRAEHQLLEMID
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FQNMTALTKMLMNKKGIQLAKWGTIGSTITEELEGAIGKLDLSLNKLTAFMPVAKDMLLV
HCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHEE
GPQWVDAYVRAVLSEAVAYGLEEGIINGTGKEMPIGMNRDIHEGVSVTGGVYPKKTSVAI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEE
KDLSPKTFGTLLATLAKDPVDEKKARTISDLVLIVNPFDYYKKVMPATTIQLQDGTYKNN
ECCCCHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCHHHHHHHCCCEEEEEECCCCCCC
VLPYPTTIVQSTQVAEGEAILGLAKKYAMGIGTGNKEGKIEYSDEYKFLEDERYYIIKLI
CCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCCEEEEEEE
GNGQALDDNAFILLNISGLEDLTYNVTVKGTVKTKEQA
CCCCEECCCCEEEEEECCCCCEEEEEEEEEEECCCCCC
>Mature Secondary Structure
MLSKDILRQQLTEKFGAAMQSENQEDMINAFVEFATGVQQEVLDDFKVYQETQDKEILQK
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHH
RGIHQLTQKETKFYQGWIDAAKSSNPRQAITNLDIALPETVIDNVMVDMRAEHQLLEMID
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FQNMTALTKMLMNKKGIQLAKWGTIGSTITEELEGAIGKLDLSLNKLTAFMPVAKDMLLV
HCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHEE
GPQWVDAYVRAVLSEAVAYGLEEGIINGTGKEMPIGMNRDIHEGVSVTGGVYPKKTSVAI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEE
KDLSPKTFGTLLATLAKDPVDEKKARTISDLVLIVNPFDYYKKVMPATTIQLQDGTYKNN
ECCCCHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCHHHHHHHCCCEEEEEECCCCCCC
VLPYPTTIVQSTQVAEGEAILGLAKKYAMGIGTGNKEGKIEYSDEYKFLEDERYYIIKLI
CCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCCEEEEEEE
GNGQALDDNAFILLNISGLEDLTYNVTVKGTVKTKEQA
CCCCEECCCCEEEEEECCCCCEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA