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The map label for this gene is 187934809

Identifier: 187934809

GI number: 187934809

Start: 942494

End: 942940

Strand: Reverse

Name: 187934809

Synonym: CLL_A0920

Alternate gene names: NA

Gene position: 942940-942494 (Counterclockwise)

Preceding gene: 187933634

Following gene: 187935146

Centisome position: 24.81

GC content: 26.4

Gene sequence:

>447_bases
ATGTTAGCTGATAAAGTGAAATATTTAAGGAATAATCTTAATTTGACCCAAGAAGAATTAGCAAATAAATTAGGAATTTC
TCAATCAAGCATTGGTATGATAGAGAGGAATAAAAGACCTGCTGGAAGAAAAATGCTTATAAAATTAGCAGACTTCTTTA
ATGTAACAGTTGATTATTTATTGTCAGATTCTGATGAAAATAACTCTGTAAATGATGGTGGAGTAACTAAAGATAATAAA
AAGACTATAGAAAAAGATTTTCCTATAATACCAGAAGAATTTACAGACCCAAATGAAGCAAGAGCATATATAATGAAACA
TCAAATTTTTGCATATGGTGGATTCTATCCTGAAAAAATGAGTGATGAAGATATATTAAATTTTGCAAATGAAATGATAG
AACAATCTAAATTAATTAGATATAAATACGAAAGTAAAAATAAATAG

Upstream 100 bases:

>100_bases
AAAGAATAAATCCCTCGTTCTTAAAGAATCTTTTATTTTCTTAAAATTACTATTGTTTTTATCCTTAATTGTGATAAAAT
TATCCTAAGAGGTGAATGTT

Downstream 100 bases:

>100_bases
AAAGAGGTACTATTTATGGGATGGGAATGGATAAATAAAATAGTAATTAACTTAAAGAAAAACTATCTTACAAATAGCCC
ATATGAGCTATGTAGATGCT

Product: transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Repressor Of PBSX Genes; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLADKVKYLRNNLNLTQEELANKLGISQSSIGMIERNKRPAGRKMLIKLADFFNVTVDYLLSDSDENNSVNDGGVTKDNK
KTIEKDFPIIPEEFTDPNEARAYIMKHQIFAYGGFYPEKMSDEDILNFANEMIEQSKLIRYKYESKNK

Sequences:

>Translated_148_residues
MLADKVKYLRNNLNLTQEELANKLGISQSSIGMIERNKRPAGRKMLIKLADFFNVTVDYLLSDSDENNSVNDGGVTKDNK
KTIEKDFPIIPEEFTDPNEARAYIMKHQIFAYGGFYPEKMSDEDILNFANEMIEQSKLIRYKYESKNK
>Mature_148_residues
MLADKVKYLRNNLNLTQEELANKLGISQSSIGMIERNKRPAGRKMLIKLADFFNVTVDYLLSDSDENNSVNDGGVTKDNK
KTIEKDFPIIPEEFTDPNEARAYIMKHQIFAYGGFYPEKMSDEDILNFANEMIEQSKLIRYKYESKNK

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17112; Mature: 17112

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLADKVKYLRNNLNLTQEELANKLGISQSSIGMIERNKRPAGRKMLIKLADFFNVTVDYL
CCHHHHHHHHHCCCCCHHHHHHHHCCCCHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LSDSDENNSVNDGGVTKDNKKTIEKDFPIIPEEFTDPNEARAYIMKHQIFAYGGFYPEKM
CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SDEDILNFANEMIEQSKLIRYKYESKNK
CHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLADKVKYLRNNLNLTQEELANKLGISQSSIGMIERNKRPAGRKMLIKLADFFNVTVDYL
CCHHHHHHHHHCCCCCHHHHHHHHCCCCHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LSDSDENNSVNDGGVTKDNKKTIEKDFPIIPEEFTDPNEARAYIMKHQIFAYGGFYPEKM
CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SDEDILNFANEMIEQSKLIRYKYESKNK
CHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA