| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935146
Identifier: 187935146
GI number: 187935146
Start: 942041
End: 942478
Strand: Reverse
Name: 187935146
Synonym: CLL_A0919
Alternate gene names: NA
Gene position: 942478-942041 (Counterclockwise)
Preceding gene: 187934809
Following gene: 187932650
Centisome position: 24.8
GC content: 25.34
Gene sequence:
>438_bases ATGGGATGGGAATGGATAAATAAAATAGTAATTAACTTAAAGAAAAACTATCTTACAAATAGCCCATATGAGCTATGTAG ATGCTTAAATATCGAAATTGTACGTGTAAAACATAATTATTTTCTATTATATAATAGGAAATCGACGTATTTTAGAAATA TTAATAATAAACAAATTATTTTTATTGCAGACGATTTGTATGGTAAAGAAGAAGAATTTATATTAAGACATGAATTAGGT CATGCAATTTTGCATCCTAATATTCAGAATTCTAGATATTGTAATACTGGCAAAATAGATAGGCAAGCTGATTATTTTGC TTTGATTCTAACTGATATAACATTTGATTCAATAAAAATGAATGAAATGACAATAAGTCAAATTTCCAGTTGTATAAATG TTCCTTTCGAAGCTTTATCTCAACTGGTTAATTTATAA
Upstream 100 bases:
>100_bases TGATGAAGATATATTAAATTTTGCAAATGAAATGATAGAACAATCTAAATTAATTAGATATAAATACGAAAGTAAAAATA AATAGAAAGAGGTACTATTT
Downstream 100 bases:
>100_bases ATATAAATAGAACATATGTTCTAAAGGGAGTTGAAAATTATGAATGGTAGTGTAAGAAAAAAAGGTAATGTATGGTACTA TCGTTACTATGAGTATGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MGWEWINKIVINLKKNYLTNSPYELCRCLNIEIVRVKHNYFLLYNRKSTYFRNINNKQIIFIADDLYGKEEEFILRHELG HAILHPNIQNSRYCNTGKIDRQADYFALILTDITFDSIKMNEMTISQISSCINVPFEALSQLVNL
Sequences:
>Translated_145_residues MGWEWINKIVINLKKNYLTNSPYELCRCLNIEIVRVKHNYFLLYNRKSTYFRNINNKQIIFIADDLYGKEEEFILRHELG HAILHPNIQNSRYCNTGKIDRQADYFALILTDITFDSIKMNEMTISQISSCINVPFEALSQLVNL >Mature_144_residues GWEWINKIVINLKKNYLTNSPYELCRCLNIEIVRVKHNYFLLYNRKSTYFRNINNKQIIFIADDLYGKEEEFILRHELGH AILHPNIQNSRYCNTGKIDRQADYFALILTDITFDSIKMNEMTISQISSCINVPFEALSQLVNL
Specific function: Unknown
COG id: COG2856
COG function: function code E; Predicted Zn peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17168; Mature: 17037
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWEWINKIVINLKKNYLTNSPYELCRCLNIEIVRVKHNYFLLYNRKSTYFRNINNKQII CCHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEEECCEEEEECCCCCEEECCCCCEEE FIADDLYGKEEEFILRHELGHAILHPNIQNSRYCNTGKIDRQADYFALILTDITFDSIKM EEECCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEE NEMTISQISSCINVPFEALSQLVNL CCHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure GWEWINKIVINLKKNYLTNSPYELCRCLNIEIVRVKHNYFLLYNRKSTYFRNINNKQII CHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEEECCEEEEECCCCCEEECCCCCEEE FIADDLYGKEEEFILRHELGHAILHPNIQNSRYCNTGKIDRQADYFALILTDITFDSIKM EEECCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEE NEMTISQISSCINVPFEALSQLVNL CCHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA