| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is manA [H]
Identifier: 187934703
GI number: 187934703
Start: 2151520
End: 2152455
Strand: Reverse
Name: manA [H]
Synonym: CLL_A2057
Alternate gene names: 187934703
Gene position: 2152455-2151520 (Counterclockwise)
Preceding gene: 187933726
Following gene: 187935739
Centisome position: 56.64
GC content: 29.27
Gene sequence:
>936_bases ATGTATCCAATTAAATTTAAAAATATATATTATGAAAAAATATGGGGAGGAAGAGACTTAGCACAGTTTAGAGATAACCT TCCTTTAGGAGATATAGGTGAAAGTTGGGATGTAGCATGTCATTCAAATGGTATGAGCATAGTTGAAAATGGTGAATTAA AAGGTAAGAGATTTGATGAACTTATAAAAGAATATGGTAAAGATTTATTAGGAGAAAGTTTTGAAAATAAGGACTTTCCA CTATTAGTTAAGTTAATAAATTCAAGAGAAAAGCTATCAGTACAAGTGCATCCTAATGATGAATATGCTAATAGAGTAGA AAATTCATTAGGAAAGACAGAAGCTTGGTATGTAGTGGATGCAAAGCCAGGAGCTTGTTTAATAGTTGGAACAAAGGATT GCAATAAGGCAGTTTTTGAAAAGGCTATAAAAGAAGGTAAAACAGAAGATTATTTAAACAAGATACAAGTTAAAAAGGGC GATTGCTTCCTTATAAATAGTGGTTTAGTACATGCTATTTGTGAAGGAGTTATTATAGCTGAAATCCAACAAAATAGTGA TATAACTTATAGAATATATGATTATGGTAGACCAAGAGAAATTCATGTTGATAAGTCTTTAGATGTTATTGATTTTGGAT TAAAGGCAATGAATTTTAGTGAAAATAAGCTAGACAGTTATGATGGTTATAAAAAAGGTGTTCTTTGTTCAAGTGAATAT TTTACCATGGAAAAGTATGTTGTTAATGGAGAAGTAGAGGAAAGCAGTGATATAAATAAATTCTTTATATTTACCTGTGT AGATGGTAATGGATTTATTAAATCATTACATGGACATGATATTGAAGTCCTTAAAGGTGACAGCATATTAATACCAGCTA AATTAGGTAAGTACGTTATAGAAGGAAACTTAACTTTATTAAAAAGTTATATTTAG
Upstream 100 bases:
>100_bases ATAAGTGGATCATTAAAAATAATAATAAAAGTAATGTTAATTATAAATTTAAATAGTTTTCCATTAAATTTTACAACTAC ATTATACAAGGAGTGATAAT
Downstream 100 bases:
>100_bases GAGGGCAAACATGAAATATTACATAGGTATAGATATAGGCGGAACAAACTTAAGAGCAGCAATATTAGATGAAAAATGTA ACTTAGTAGATAAGCTTAAA
Product: mannose-6-phosphate isomerase, class I
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MYPIKFKNIYYEKIWGGRDLAQFRDNLPLGDIGESWDVACHSNGMSIVENGELKGKRFDELIKEYGKDLLGESFENKDFP LLVKLINSREKLSVQVHPNDEYANRVENSLGKTEAWYVVDAKPGACLIVGTKDCNKAVFEKAIKEGKTEDYLNKIQVKKG DCFLINSGLVHAICEGVIIAEIQQNSDITYRIYDYGRPREIHVDKSLDVIDFGLKAMNFSENKLDSYDGYKKGVLCSSEY FTMEKYVVNGEVEESSDINKFFIFTCVDGNGFIKSLHGHDIEVLKGDSILIPAKLGKYVIEGNLTLLKSYI
Sequences:
>Translated_311_residues MYPIKFKNIYYEKIWGGRDLAQFRDNLPLGDIGESWDVACHSNGMSIVENGELKGKRFDELIKEYGKDLLGESFENKDFP LLVKLINSREKLSVQVHPNDEYANRVENSLGKTEAWYVVDAKPGACLIVGTKDCNKAVFEKAIKEGKTEDYLNKIQVKKG DCFLINSGLVHAICEGVIIAEIQQNSDITYRIYDYGRPREIHVDKSLDVIDFGLKAMNFSENKLDSYDGYKKGVLCSSEY FTMEKYVVNGEVEESSDINKFFIFTCVDGNGFIKSLHGHDIEVLKGDSILIPAKLGKYVIEGNLTLLKSYI >Mature_311_residues MYPIKFKNIYYEKIWGGRDLAQFRDNLPLGDIGESWDVACHSNGMSIVENGELKGKRFDELIKEYGKDLLGESFENKDFP LLVKLINSREKLSVQVHPNDEYANRVENSLGKTEAWYVVDAKPGACLIVGTKDCNKAVFEKAIKEGKTEDYLNKIQVKKG DCFLINSGLVHAICEGVIIAEIQQNSDITYRIYDYGRPREIHVDKSLDVIDFGLKAMNFSENKLDSYDGYKKGVLCSSEY FTMEKYVVNGEVEESSDINKFFIFTCVDGNGFIKSLHGHDIEVLKGDSILIPAKLGKYVIEGNLTLLKSYI
Specific function: Unknown
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR014628 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 35209; Mature: 35209
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPIKFKNIYYEKIWGGRDLAQFRDNLPLGDIGESWDVACHSNGMSIVENGELKGKRFDE CCCEEECCEEEEHHCCCCHHHHHHCCCCCCCCCCCCCEEECCCCCEEEECCCCCCHHHHH LIKEYGKDLLGESFENKDFPLLVKLINSREKLSVQVHPNDEYANRVENSLGKTEAWYVVD HHHHHHHHHHCCCCCCCCCHHHHEECCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEEE AKPGACLIVGTKDCNKAVFEKAIKEGKTEDYLNKIQVKKGDCFLINSGLVHAICEGVIIA CCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHEEEECCCEEEECCCHHHHHHCCEEEE EIQQNSDITYRIYDYGRPREIHVDKSLDVIDFGLKAMNFSENKLDSYDGYKKGVLCSSEY EEECCCCEEEEEEECCCCEEEEECCCCCEEECCHHHCCCCCCCCCCCCCCCCCEEECCCC FTMEKYVVNGEVEESSDINKFFIFTCVDGNGFIKSLHGHDIEVLKGDSILIPAKLGKYVI EEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEECCCCEEEEEECCCEEEECCCCCEEE EGNLTLLKSYI ECCCEEEEECC >Mature Secondary Structure MYPIKFKNIYYEKIWGGRDLAQFRDNLPLGDIGESWDVACHSNGMSIVENGELKGKRFDE CCCEEECCEEEEHHCCCCHHHHHHCCCCCCCCCCCCCEEECCCCCEEEECCCCCCHHHHH LIKEYGKDLLGESFENKDFPLLVKLINSREKLSVQVHPNDEYANRVENSLGKTEAWYVVD HHHHHHHHHHCCCCCCCCCHHHHEECCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEEE AKPGACLIVGTKDCNKAVFEKAIKEGKTEDYLNKIQVKKGDCFLINSGLVHAICEGVIIA CCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHEEEECCCEEEECCCHHHHHHCCEEEE EIQQNSDITYRIYDYGRPREIHVDKSLDVIDFGLKAMNFSENKLDSYDGYKKGVLCSSEY EEECCCCEEEEEEECCCCEEEEECCCCCEEECCHHHCCCCCCCCCCCCCCCCCEEECCCC FTMEKYVVNGEVEESSDINKFFIFTCVDGNGFIKSLHGHDIEVLKGDSILIPAKLGKYVI EEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEECCCCEEEEEECCCEEEECCCCCEEE EGNLTLLKSYI ECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8293960; 12397186 [H]