| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is glcK [H]
Identifier: 187935739
GI number: 187935739
Start: 2150619
End: 2151509
Strand: Reverse
Name: glcK [H]
Synonym: CLL_A2056
Alternate gene names: 187935739
Gene position: 2151509-2150619 (Counterclockwise)
Preceding gene: 187934703
Following gene: 187932395
Centisome position: 56.61
GC content: 31.31
Gene sequence:
>891_bases ATGAAATATTACATAGGTATAGATATAGGCGGAACAAACTTAAGAGCAGCAATATTAGATGAAAAATGTAACTTAGTAGA TAAGCTTAAAATATCAAATGAAGTTGAAAAAGGGCCAGAATATAATTTAGACAAGCTAATATTAGAAATTAAAGAAAGGT GGTCAGATAAAGAAATTATTTCAGTAGGTGTGGGGTGTCCAGGACCACTTGATATTAGAAGTGGAACAATATTAGTTACT CCAAATTTAAGGACATGGGAATATTTTAAATTAAAAGAATACCTAGAAAATAAGTTTGATTTACCTGTGTTTGTAAATAA TGATGCCAATGTAGCAGGATATAGTGAAGCAATGGTTGGAGCAGGAAAAGGTGCAGAAAGTGTTTACTATATGACACTAT CAACAGGGATTGGTGGAGGCTTTATATATAAAGGTGAAATTGTTTCTGGCTTTAATAGCATAGCAGCTGAAATAGGTAAT ATGATTATTAATGAAGATACATATAAACATTCTAATATGAACTATGGTGGACTTGAAGGTCAATGCAGTGGAGTAAATAT AGCAAGGATATCAAGTGAAATTATAGGTGGAGAATTAACTACAAAAGATGTCTTTGAGGGTGCAGAAAAGGGCAATATGG AATTGCAAAAAATGTTAAGTGAATGGGTTACAAATGTTTCAAAAGCAATAGCAAATATTATAGTTACAGTTGATCCAGAA GTTATAGTTCTTGGTGGGTCAGTAATTATAAATAATCCATCTTACCTTAATAAGATTAAAGAAGAAACTCAGAAAAGAGT CTTTGATGGTATTAAAATTAATATTAAGTTAGCTGAGATTGGTGATGACACTGGACTTATAGGTGCAGGGTTATTAGGTA AGTTAAAATAA
Upstream 100 bases:
>100_bases GTCCTTAAAGGTGACAGCATATTAATACCAGCTAAATTAGGTAAGTACGTTATAGAAGGAAACTTAACTTTATTAAAAAG TTATATTTAGGAGGGCAAAC
Downstream 100 bases:
>100_bases AATAATTGAATTGGAAGGCTACTCCATATGTATTTTACAAGGAGTAGTTTTATTAATTTCGAGAAAATATAATATTAATG AAATATGAGGTTTGATAAAA
Product: glucokinase
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MKYYIGIDIGGTNLRAAILDEKCNLVDKLKISNEVEKGPEYNLDKLILEIKERWSDKEIISVGVGCPGPLDIRSGTILVT PNLRTWEYFKLKEYLENKFDLPVFVNNDANVAGYSEAMVGAGKGAESVYYMTLSTGIGGGFIYKGEIVSGFNSIAAEIGN MIINEDTYKHSNMNYGGLEGQCSGVNIARISSEIIGGELTTKDVFEGAEKGNMELQKMLSEWVTNVSKAIANIIVTVDPE VIVLGGSVIINNPSYLNKIKEETQKRVFDGIKINIKLAEIGDDTGLIGAGLLGKLK
Sequences:
>Translated_296_residues MKYYIGIDIGGTNLRAAILDEKCNLVDKLKISNEVEKGPEYNLDKLILEIKERWSDKEIISVGVGCPGPLDIRSGTILVT PNLRTWEYFKLKEYLENKFDLPVFVNNDANVAGYSEAMVGAGKGAESVYYMTLSTGIGGGFIYKGEIVSGFNSIAAEIGN MIINEDTYKHSNMNYGGLEGQCSGVNIARISSEIIGGELTTKDVFEGAEKGNMELQKMLSEWVTNVSKAIANIIVTVDPE VIVLGGSVIINNPSYLNKIKEETQKRVFDGIKINIKLAEIGDDTGLIGAGLLGKLK >Mature_296_residues MKYYIGIDIGGTNLRAAILDEKCNLVDKLKISNEVEKGPEYNLDKLILEIKERWSDKEIISVGVGCPGPLDIRSGTILVT PNLRTWEYFKLKEYLENKFDLPVFVNNDANVAGYSEAMVGAGKGAESVYYMTLSTGIGGGFIYKGEIVSGFNSIAAEIGN MIINEDTYKHSNMNYGGLEGQCSGVNIARISSEIIGGELTTKDVFEGAEKGNMELQKMLSEWVTNVSKAIANIIVTVDPE VIVLGGSVIINNPSYLNKIKEETQKRVFDGIKINIKLAEIGDDTGLIGAGLLGKLK
Specific function: Unknown
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566315, Length=284, Percent_Identity=27.4647887323944, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI4885285, Length=285, Percent_Identity=27.719298245614, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI298566325, Length=285, Percent_Identity=27.719298245614, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI190014632, Length=263, Percent_Identity=29.277566539924, Blast_Score=93, Evalue=3e-19, Organism=Escherichia coli, GI1787363, Length=303, Percent_Identity=25.0825082508251, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI87081733, Length=306, Percent_Identity=25.8169934640523, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI87082230, Length=250, Percent_Identity=28, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790522, Length=299, Percent_Identity=24.7491638795987, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786891, Length=307, Percent_Identity=23.7785016286645, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787878, Length=220, Percent_Identity=23.6363636363636, Blast_Score=68, Evalue=7e-13,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 32230; Mature: 32230
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYYIGIDIGGTNLRAAILDEKCNLVDKLKISNEVEKGPEYNLDKLILEIKERWSDKEII CEEEEEEEECCCCEEEEEECCCCCHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCEEE SVGVGCPGPLDIRSGTILVTPNLRTWEYFKLKEYLENKFDLPVFVNNDANVAGYSEAMVG EEECCCCCCCEECCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHC AGKGAESVYYMTLSTGIGGGFIYKGEIVSGFNSIAAEIGNMIINEDTYKHSNMNYGGLEG CCCCCCEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCC QCSGVNIARISSEIIGGELTTKDVFEGAEKGNMELQKMLSEWVTNVSKAIANIIVTVDPE EECCEEHEEHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCC VIVLGGSVIINNPSYLNKIKEETQKRVFDGIKINIKLAEIGDDTGLIGAGLLGKLK EEEECCEEEECCCHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCEECCCCCCCCC >Mature Secondary Structure MKYYIGIDIGGTNLRAAILDEKCNLVDKLKISNEVEKGPEYNLDKLILEIKERWSDKEII CEEEEEEEECCCCEEEEEECCCCCHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCEEE SVGVGCPGPLDIRSGTILVTPNLRTWEYFKLKEYLENKFDLPVFVNNDANVAGYSEAMVG EEECCCCCCCEECCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHC AGKGAESVYYMTLSTGIGGGFIYKGEIVSGFNSIAAEIGNMIINEDTYKHSNMNYGGLEG CCCCCCEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCC QCSGVNIARISSEIIGGELTTKDVFEGAEKGNMELQKMLSEWVTNVSKAIANIIVTVDPE EECCEEHEEHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCC VIVLGGSVIINNPSYLNKIKEETQKRVFDGIKINIKLAEIGDDTGLIGAGLLGKLK EEEECCEEEECCCHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]