Click here to switch to the map view.

The map label for this gene is xkdU [H]

Identifier: 187934658

GI number: 187934658

Start: 1992291

End: 1992908

Strand: Reverse

Name: xkdU [H]

Synonym: CLL_A1897

Alternate gene names: 187934658

Gene position: 1992908-1992291 (Counterclockwise)

Preceding gene: 187933863

Following gene: 187935427

Centisome position: 52.44

GC content: 29.45

Gene sequence:

>618_bases
ATGCAACTTAAAGATTATGTACCATCTTTTTTGAGTGGAGATAAAATTTTATCTAAAGTTTATGAAGAACAGCAAAAGCA
AATAGATTCCACTAATGCAGATATACAAGATTTAATTAATCAATGCTTTGTAGAAACTGCAACTTGGGGATTAGACACTT
GGGAAAAGGAATTAGGAATACAAAGCAATATAGGAGATAGTTATTCTATTAGAAGAAGTAGAATCTTAGCTAAACTTAGA
GGGCAAGGAACAACTACAATAGAAGCAATCAAAAACATATGTAAAAGCTTTGTTGAAGATGTTGAAGTTATAGAGCATAA
TTCAGAGTATTATTTTCAAATTAATTTATTAAGTCATAGTGGTTTTTCTAAAGGATTTGATACTTTGTATGATTCTATAA
GAGAAGTAAAACCAAGTCATTTAAATACTAACTATATTTTAAGAGCAATTACAGAAACAGATTTTAGAGTAGTTATGGTT
GGCTTACAGGGAGAAATAATAAAAACTTTTCCATGGACACCTAATAATCTAGCTTATAAAGCAGATGTTAAAATCCCATT
AATGCAGCCTAAAAGTTTCGAAAACATTAGAACATATCCAGTAGAGGAGGGATTATAG

Upstream 100 bases:

>100_bases
GATGGAGTTGAAGATTATAATAATTTAACCATTAATAGTAGCGCTACTAATGTAACTGTAAATGACAATCAAATAGCTGT
TCTTGGTGAGGTGGTATGTA

Downstream 100 bases:

>100_bases
TGGCAGAAAAATTTTATAGCATATTAACCAATATAGGAAAAGCTAAAGTTGCTAATTCTATAGGATTAGGCACTAAAGTA
AACTTTTCAAAAATGAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MQLKDYVPSFLSGDKILSKVYEEQQKQIDSTNADIQDLINQCFVETATWGLDTWEKELGIQSNIGDSYSIRRSRILAKLR
GQGTTTIEAIKNICKSFVEDVEVIEHNSEYYFQINLLSHSGFSKGFDTLYDSIREVKPSHLNTNYILRAITETDFRVVMV
GLQGEIIKTFPWTPNNLAYKADVKIPLMQPKSFENIRTYPVEEGL

Sequences:

>Translated_205_residues
MQLKDYVPSFLSGDKILSKVYEEQQKQIDSTNADIQDLINQCFVETATWGLDTWEKELGIQSNIGDSYSIRRSRILAKLR
GQGTTTIEAIKNICKSFVEDVEVIEHNSEYYFQINLLSHSGFSKGFDTLYDSIREVKPSHLNTNYILRAITETDFRVVMV
GLQGEIIKTFPWTPNNLAYKADVKIPLMQPKSFENIRTYPVEEGL
>Mature_205_residues
MQLKDYVPSFLSGDKILSKVYEEQQKQIDSTNADIQDLINQCFVETATWGLDTWEKELGIQSNIGDSYSIRRSRILAKLR
GQGTTTIEAIKNICKSFVEDVEVIEHNSEYYFQINLLSHSGFSKGFDTLYDSIREVKPSHLNTNYILRAITETDFRVVMV
GLQGEIIKTFPWTPNNLAYKADVKIPLMQPKSFENIRTYPVEEGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqcA [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018755 [H]

Pfam domain/function: PF10076 DUF2313 [H]

EC number: NA

Molecular weight: Translated: 23527; Mature: 23527

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKDYVPSFLSGDKILSKVYEEQQKQIDSTNADIQDLINQCFVETATWGLDTWEKELGI
CCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCC
QSNIGDSYSIRRSRILAKLRGQGTTTIEAIKNICKSFVEDVEVIEHNSEYYFQINLLSHS
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECC
GFSKGFDTLYDSIREVKPSHLNTNYILRAITETDFRVVMVGLQGEIIKTFPWTPNNLAYK
CCCCHHHHHHHHHHHCCCCCCCHHHHEEEECCCCEEEEEEECCCCEEEECCCCCCCEEEE
ADVKIPLMQPKSFENIRTYPVEEGL
ECCEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQLKDYVPSFLSGDKILSKVYEEQQKQIDSTNADIQDLINQCFVETATWGLDTWEKELGI
CCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCC
QSNIGDSYSIRRSRILAKLRGQGTTTIEAIKNICKSFVEDVEVIEHNSEYYFQINLLSHS
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECC
GFSKGFDTLYDSIREVKPSHLNTNYILRAITETDFRVVMVGLQGEIIKTFPWTPNNLAYK
CCCCHHHHHHHHHHHCCCCCCCHHHHEEEECCCCEEEEEEECCCCEEEECCCCCCCEEEE
ADVKIPLMQPKSFENIRTYPVEEGL
ECCEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]