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The map label for this gene is 187935427

Identifier: 187935427

GI number: 187935427

Start: 1990900

End: 1992291

Strand: Reverse

Name: 187935427

Synonym: CLL_A1896

Alternate gene names: NA

Gene position: 1992291-1990900 (Counterclockwise)

Preceding gene: 187934658

Following gene: 187934715

Centisome position: 52.42

GC content: 29.45

Gene sequence:

>1392_bases
GTGGCAGAAAAATTTTATAGCATATTAACCAATATAGGAAAAGCTAAAGTTGCTAATTCTATAGGATTAGGCACTAAAGT
AAACTTTTCAAAAATGAAAGTAGGAGATGGAGGTGGTAGTTACTATGAGCCTACAGAAAGCCAAACTGATTTAAAAAATG
TTGTTTGGGAAGGAAATATAAATCATGTTACAGTTGATGAAGAAAATCCAAACTGGATTCACATAGAAGTTATGATTCCA
AGTACAGTTGGAGGATTTACTATAAGAGAATATGGCGCTTTTGATGATGAAAATAATCTTATAGGAATATGTAAATGTGC
TGAAACTTATAAGCCTGTAATAGCAGATGGAAGTACAAAAGAGCTCTTACTAGATTTAATACTATGTGTAGTTAATACAG
ATACAGTAGAACTTAAAGTAGATCCAACTATTATCTTTGCTAAAAAAGGTGAAGTAGAACAATTAAGAACAGATATAAAT
ATACAATTGAAAGATATTGCGAACGATAGTTATCCAATAGTAGAAGCAACAGGAACTAATATTTATGTTGGTTCTACAGC
TAGAATAACTAAACTAAGCAAAGGTACAAGATGTACTTTGTTTGTTAATACAGATTCTAATGGTAATTGTAGTTTGAATT
TAAACAATTATGGAGTAAAAAACATTAAAGACAGCTTTGGTAATATAGTTACTAATCTTAAATCTAATATTCCATATAAC
TTATGTTATAATGGCTCGGATTTTATATTACAGGGTAAAGGAGGTGGTGGAAACCTAATTCCTAAATATCTATTACAAGG
TTATTATGGAGATGGAGATAATGGACGAGTAGATGGTTCTATGGTTAACAGGGGTGCTCCAGTTGTAAATTTAAATTGTG
GTGGAACATTTAATTTACAAGAAGGTTATTATAGTGGGGGACAGGCGATTGCTAATAATCTTGCAAGCCAAACAAGTGCA
AATGCTACAGCATCTCAAATATTATCTGGATTTTCTGCTTGGGTAAATGGGAATAAAATAAATGGGAGTGCTACTATAGA
GAGTTTAGGTGGGAAGAAATTTAAAAGTGGAACTTTGAATATATCTAATCTACAAACTAAGTCTTATAATGTAGTTAATT
TAGAAAATAATACTCTTACTAATTCTACAAGAAATGTTAACGAAATTTCTTTAGAATTAGATTTCGTAGCAAAGTTTTTA
ATTATACATTCTAATAGTTATACAAACTCAATTTCAGTAAAATTTAATGATATATGTATTGCTATTTATGATGAATCTAG
TAGTGGATATGATAGGGTAAATTGTTATAGAGTAAATCAAAATAATAATACAATTCCTATAGATCTTTCAACTTATGCAA
AAACATTTACTTATTATGCATTTGGAGATTAG

Upstream 100 bases:

>100_bases
CACCTAATAATCTAGCTTATAAAGCAGATGTTAAAATCCCATTAATGCAGCCTAAAAGTTTCGAAAACATTAGAACATAT
CCAGTAGAGGAGGGATTATA

Downstream 100 bases:

>100_bases
AAAGGAGAGAATAATGTATGAAAATATTAACAGTATACAACAGCAAAGGACAACTTATATTTACACAAACTAATGCTATA
GAACAATATAGTTGTTTGGT

Product: tail fiber protein

Products: NA

Alternate protein names: Phage Tail Fiber Protein; Tail Collar Domain Protein; Phage-Related Tail Fibre Protein-Like Protein; Tail Fiber Protein H; Variable Tail Fibre Protein; Tail Fiber-Related Protein; Phage Tail Collar Domain-Containing Protein; Phage Tail Collar Domain Protein; Phage Tail Fiber Protein H; Variable Tail Fiber Protein; Tail Fiber Domain Protein; Tail Fiber Domain-Containing Protein; Bacteriophage Tail Protein; Phage Tail Fibre Protein; Bacteriophage Variable Tail Fiber Protein H; Side Tail Phage Protein; Phage Variable Tail Fiber Protein; Phage Tail Fiber Domain Protein; Phage-Related Tail Fiber Protein-Like Protein; Tail Fiber Repeat 2 Protein; Phage Variable Tail Fibre Protein; Phage Tail Fiber-Like Protein; Phage P2 Tail Fiber GpH-Like Protein; Phage-Like Tail Fiber-Like Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage Tail Collar; E14 Prophage; Bacteriophage Variable Tail Fibre Protein; Prophage Tail Fiber Protein; Phage Protein GpH; Phage Protein; Phage-Like Tail Fibre Protein; Tail Fiber Repeat 2-Containing Protein; Tail Fiber Protein GpH

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MAEKFYSILTNIGKAKVANSIGLGTKVNFSKMKVGDGGGSYYEPTESQTDLKNVVWEGNINHVTVDEENPNWIHIEVMIP
STVGGFTIREYGAFDDENNLIGICKCAETYKPVIADGSTKELLLDLILCVVNTDTVELKVDPTIIFAKKGEVEQLRTDIN
IQLKDIANDSYPIVEATGTNIYVGSTARITKLSKGTRCTLFVNTDSNGNCSLNLNNYGVKNIKDSFGNIVTNLKSNIPYN
LCYNGSDFILQGKGGGGNLIPKYLLQGYYGDGDNGRVDGSMVNRGAPVVNLNCGGTFNLQEGYYSGGQAIANNLASQTSA
NATASQILSGFSAWVNGNKINGSATIESLGGKKFKSGTLNISNLQTKSYNVVNLENNTLTNSTRNVNEISLELDFVAKFL
IIHSNSYTNSISVKFNDICIAIYDESSSGYDRVNCYRVNQNNNTIPIDLSTYAKTFTYYAFGD

Sequences:

>Translated_463_residues
MAEKFYSILTNIGKAKVANSIGLGTKVNFSKMKVGDGGGSYYEPTESQTDLKNVVWEGNINHVTVDEENPNWIHIEVMIP
STVGGFTIREYGAFDDENNLIGICKCAETYKPVIADGSTKELLLDLILCVVNTDTVELKVDPTIIFAKKGEVEQLRTDIN
IQLKDIANDSYPIVEATGTNIYVGSTARITKLSKGTRCTLFVNTDSNGNCSLNLNNYGVKNIKDSFGNIVTNLKSNIPYN
LCYNGSDFILQGKGGGGNLIPKYLLQGYYGDGDNGRVDGSMVNRGAPVVNLNCGGTFNLQEGYYSGGQAIANNLASQTSA
NATASQILSGFSAWVNGNKINGSATIESLGGKKFKSGTLNISNLQTKSYNVVNLENNTLTNSTRNVNEISLELDFVAKFL
IIHSNSYTNSISVKFNDICIAIYDESSSGYDRVNCYRVNQNNNTIPIDLSTYAKTFTYYAFGD
>Mature_462_residues
AEKFYSILTNIGKAKVANSIGLGTKVNFSKMKVGDGGGSYYEPTESQTDLKNVVWEGNINHVTVDEENPNWIHIEVMIPS
TVGGFTIREYGAFDDENNLIGICKCAETYKPVIADGSTKELLLDLILCVVNTDTVELKVDPTIIFAKKGEVEQLRTDINI
QLKDIANDSYPIVEATGTNIYVGSTARITKLSKGTRCTLFVNTDSNGNCSLNLNNYGVKNIKDSFGNIVTNLKSNIPYNL
CYNGSDFILQGKGGGGNLIPKYLLQGYYGDGDNGRVDGSMVNRGAPVVNLNCGGTFNLQEGYYSGGQAIANNLASQTSAN
ATASQILSGFSAWVNGNKINGSATIESLGGKKFKSGTLNISNLQTKSYNVVNLENNTLTNSTRNVNEISLELDFVAKFLI
IHSNSYTNSISVKFNDICIAIYDESSSGYDRVNCYRVNQNNNTIPIDLSTYAKTFTYYAFGD

Specific function: Unknown

COG id: COG5301

COG function: function code R; Phage-related tail fibre protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50311; Mature: 50180

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKFYSILTNIGKAKVANSIGLGTKVNFSKMKVGDGGGSYYEPTESQTDLKNVVWEGNI
CCHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHEEEECCC
NHVTVDEENPNWIHIEVMIPSTVGGFTIREYGAFDDENNLIGICKCAETYKPVIADGSTK
CEEEECCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCEEECCCHH
ELLLDLILCVVNTDTVELKVDPTIIFAKKGEVEQLRTDINIQLKDIANDSYPIVEATGTN
HHHHHHHHHHCCCCEEEEEECCEEEEECCCCHHHHHCCCCEEEEECCCCCCCEEEECCCE
IYVGSTARITKLSKGTRCTLFVNTDSNGNCSLNLNNYGVKNIKDSFGNIVTNLKSNIPYN
EEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEE
LCYNGSDFILQGKGGGGNLIPKYLLQGYYGDGDNGRVDGSMVNRGAPVVNLNCGGTFNLQ
EEECCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCEECCHHHCCCCCEEEEECCCEEECC
EGYYSGGQAIANNLASQTSANATASQILSGFSAWVNGNKINGSATIESLGGKKFKSGTLN
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEECCCEEEECCCCCEECCCEEE
ISNLQTKSYNVVNLENNTLTNSTRNVNEISLELDFVAKFLIIHSNSYTNSISVKFNDICI
EEEEEECCEEEEEECCCEECCCCCCCEEEEEEHHHEEEEEEEECCCCCCEEEEEEEEEEE
AIYDESSSGYDRVNCYRVNQNNNTIPIDLSTYAKTFTYYAFGD
EEEECCCCCCCEEEEEEECCCCCEEEEEEHHCEEEEEEEEECC
>Mature Secondary Structure 
AEKFYSILTNIGKAKVANSIGLGTKVNFSKMKVGDGGGSYYEPTESQTDLKNVVWEGNI
CHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHEEEECCC
NHVTVDEENPNWIHIEVMIPSTVGGFTIREYGAFDDENNLIGICKCAETYKPVIADGSTK
CEEEECCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCEEECCCHH
ELLLDLILCVVNTDTVELKVDPTIIFAKKGEVEQLRTDINIQLKDIANDSYPIVEATGTN
HHHHHHHHHHCCCCEEEEEECCEEEEECCCCHHHHHCCCCEEEEECCCCCCCEEEECCCE
IYVGSTARITKLSKGTRCTLFVNTDSNGNCSLNLNNYGVKNIKDSFGNIVTNLKSNIPYN
EEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEE
LCYNGSDFILQGKGGGGNLIPKYLLQGYYGDGDNGRVDGSMVNRGAPVVNLNCGGTFNLQ
EEECCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCEECCHHHCCCCCEEEEECCCEEECC
EGYYSGGQAIANNLASQTSANATASQILSGFSAWVNGNKINGSATIESLGGKKFKSGTLN
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEECCCEEEECCCCCEECCCEEE
ISNLQTKSYNVVNLENNTLTNSTRNVNEISLELDFVAKFLIIHSNSYTNSISVKFNDICI
EEEEEECCEEEEEECCCEECCCCCCCEEEEEEHHHEEEEEEEECCCCCCEEEEEEEEEEE
AIYDESSSGYDRVNCYRVNQNNNTIPIDLSTYAKTFTYYAFGD
EEEECCCCCCCEEEEEEECCCCCEEEEEEHHCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA