Click here to switch to the map view.

The map label for this gene is 187934629

Identifier: 187934629

GI number: 187934629

Start: 2031170

End: 2031763

Strand: Reverse

Name: 187934629

Synonym: CLL_A1958

Alternate gene names: NA

Gene position: 2031763-2031170 (Counterclockwise)

Preceding gene: 187935147

Following gene: 187933876

Centisome position: 53.46

GC content: 27.1

Gene sequence:

>594_bases
ATGAAAAAACTAGCAATTTTATCATTAATAGCAGTATTAATGACTGGTTTAATAGCATGTGGAGAGAGCACTAAAAACCA
AAGTAGTGGATCTTCAGAAACTAAGGTAGAAAATACTAATAATGATAAAGGTAATCAACAAAAACAAGAAAAGAAAGAAG
AAGTAAAAACAGTGGAAATAGGAAATACAATCAGTAGTGAGTCAGCAGAAATCATTATTAATAAAGTTGAATTTTCTTAT
GATGTTTTACCAGATGATACAAGCTCATTTTACACACATTATGCAGCAGAATCAGGAAAGGTTTATATTAATATAGATGT
TGATGTAAAAAATATTCAAAAACAAGATTTGCCATGTGATAAAATAATTAATGTAGAAGCTAATTATAATGATGGATATG
AATACAAAGGTCAACCAATAGTAGAGGATGCATCAACAGGATTTACTTATGCTAATATTACAAGTATAACTCCATTAGAA
ACTAAAGGTATGAGATATATAATTAATTGTCCACAAGAAGTTGCAGAAAGTCAAAATCCATTAGTAATAACTTTTAATTT
AAATAAAGAAAAATACAATTATACAGTTAGGTAA

Upstream 100 bases:

>100_bases
TGTTATGTAAAAATAAATCCAGTATAGTAAAAATATAGAATAAAAATAGAAAATATAGTATAATATAAATCGTAATGTAC
ATTATAACGGGGGGATAATA

Downstream 100 bases:

>100_bases
CAAATTGTTTTACAGACACTTATAATTTAAAATTATAAGTGTTGTTTTTATGTTTAGGGTGCTATAAGTTTAATAATTTA
TACTAAATTGATTTTAAAAT

Product: phage lipoprotein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKKLAILSLIAVLMTGLIACGESTKNQSSGSSETKVENTNNDKGNQQKQEKKEEVKTVEIGNTISSESAEIIINKVEFSY
DVLPDDTSSFYTHYAAESGKVYINIDVDVKNIQKQDLPCDKIINVEANYNDGYEYKGQPIVEDASTGFTYANITSITPLE
TKGMRYIINCPQEVAESQNPLVITFNLNKEKYNYTVR

Sequences:

>Translated_197_residues
MKKLAILSLIAVLMTGLIACGESTKNQSSGSSETKVENTNNDKGNQQKQEKKEEVKTVEIGNTISSESAEIIINKVEFSY
DVLPDDTSSFYTHYAAESGKVYINIDVDVKNIQKQDLPCDKIINVEANYNDGYEYKGQPIVEDASTGFTYANITSITPLE
TKGMRYIINCPQEVAESQNPLVITFNLNKEKYNYTVR
>Mature_197_residues
MKKLAILSLIAVLMTGLIACGESTKNQSSGSSETKVENTNNDKGNQQKQEKKEEVKTVEIGNTISSESAEIIINKVEFSY
DVLPDDTSSFYTHYAAESGKVYINIDVDVKNIQKQDLPCDKIINVEANYNDGYEYKGQPIVEDASTGFTYANITSITPLE
TKGMRYIINCPQEVAESQNPLVITFNLNKEKYNYTVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21987; Mature: 21987

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLAILSLIAVLMTGLIACGESTKNQSSGSSETKVENTNNDKGNQQKQEKKEEVKTVEI
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHEEEEE
GNTISSESAEIIINKVEFSYDVLPDDTSSFYTHYAAESGKVYINIDVDVKNIQKQDLPCD
CCCCCCCCEEEEEEEEEEEEECCCCCCHHHEEEEECCCCEEEEEEEEEHHHCCCCCCCCC
KIINVEANYNDGYEYKGQPIVEDASTGFTYANITSITPLETKGMRYIINCPQEVAESQNP
CEEEEEECCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHCCCCC
LVITFNLNKEKYNYTVR
EEEEEECCCCEEEEEEC
>Mature Secondary Structure
MKKLAILSLIAVLMTGLIACGESTKNQSSGSSETKVENTNNDKGNQQKQEKKEEVKTVEI
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHEEEEE
GNTISSESAEIIINKVEFSYDVLPDDTSSFYTHYAAESGKVYINIDVDVKNIQKQDLPCD
CCCCCCCCEEEEEEEEEEEEECCCCCCHHHEEEEECCCCEEEEEEEEEHHHCCCCCCCCC
KIINVEANYNDGYEYKGQPIVEDASTGFTYANITSITPLETKGMRYIINCPQEVAESQNP
CEEEEEECCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHCCCCC
LVITFNLNKEKYNYTVR
EEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA