| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935147
Identifier: 187935147
GI number: 187935147
Start: 2031947
End: 2032597
Strand: Reverse
Name: 187935147
Synonym: CLL_A1959
Alternate gene names: NA
Gene position: 2032597-2031947 (Counterclockwise)
Preceding gene: 187932631
Following gene: 187934629
Centisome position: 53.48
GC content: 22.27
Gene sequence:
>651_bases ATGAATGATGCTTATGTCTTTAAAGATGATAATAGATATGGGGAATATTGTGACGCGGTAAATATAGGAGACATAAATGT TAACTTTAAACCAACAGAATTTATAGAGAAATTTATAAAAAGTAGTTATAACATTAAGAAAGTGAATCTTAATTATACAG TGCTTATTGGAACATATACTTTAGAAGATGGAAAGAAAATAGATTATTATTACAAACCATATATAATTTTAGAAAAAGAT TCAGAAGAAAATTATGAAAATTCAGTTCAAAAAATATCAATGGCTGATATGAAAAAAGCATCAGAAGAAGCACAAATAAG AAAATATGATTTTATAGCTGATTATACTTATACTAGATCAAAAAGCAATATAAGGCGTAGCGTTGTTGAATATGAAGAAA ATCCATTGTTAGTTAAAATTATAGATAATGTTATTTATAATTATGAAAGAAAATTTATGAGAGAATTAAATATAATATCT TTTGAACCATTTTTTAATAAAATAGTTCAAGAAGGTGAAATAGAAGTTGAAAATATATATAATACGTATGTAAAAATACA CAATACATCATATTATAAAGATAAGTTTAGAAAAATACCTTCATTTAAAATAAGTAAAATAGGTATGGAATATTTTTATA GTAAATATTGA
Upstream 100 bases:
>100_bases CAACAATATTATCAGTGTTACCATATATATTAAATTATGTAGTAATAAAAGGAATTTCAAATTCATATTATATAATATAA AATCTTAGGAGGAGAAGCTT
Downstream 100 bases:
>100_bases ATATTAAAAGACTATTAGATTAAATCTAGTAGTCTTTTATTGTTATTTTAACCATTATGAAATATTTGATAATAAGAAAC AAATGTTATGTAAAAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MNDAYVFKDDNRYGEYCDAVNIGDINVNFKPTEFIEKFIKSSYNIKKVNLNYTVLIGTYTLEDGKKIDYYYKPYIILEKD SEENYENSVQKISMADMKKASEEAQIRKYDFIADYTYTRSKSNIRRSVVEYEENPLLVKIIDNVIYNYERKFMRELNIIS FEPFFNKIVQEGEIEVENIYNTYVKIHNTSYYKDKFRKIPSFKISKIGMEYFYSKY
Sequences:
>Translated_216_residues MNDAYVFKDDNRYGEYCDAVNIGDINVNFKPTEFIEKFIKSSYNIKKVNLNYTVLIGTYTLEDGKKIDYYYKPYIILEKD SEENYENSVQKISMADMKKASEEAQIRKYDFIADYTYTRSKSNIRRSVVEYEENPLLVKIIDNVIYNYERKFMRELNIIS FEPFFNKIVQEGEIEVENIYNTYVKIHNTSYYKDKFRKIPSFKISKIGMEYFYSKY >Mature_216_residues MNDAYVFKDDNRYGEYCDAVNIGDINVNFKPTEFIEKFIKSSYNIKKVNLNYTVLIGTYTLEDGKKIDYYYKPYIILEKD SEENYENSVQKISMADMKKASEEAQIRKYDFIADYTYTRSKSNIRRSVVEYEENPLLVKIIDNVIYNYERKFMRELNIIS FEPFFNKIVQEGEIEVENIYNTYVKIHNTSYYKDKFRKIPSFKISKIGMEYFYSKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26003; Mature: 26003
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDAYVFKDDNRYGEYCDAVNIGDINVNFKPTEFIEKFIKSSYNIKKVNLNYTVLIGTYT CCCCEEEECCCCCCCCCCEEEECEEEECCCHHHHHHHHHHCCCCEEEEECEEEEEEEEEE LEDGKKIDYYYKPYIILEKDSEENYENSVQKISMADMKKASEEAQIRKYDFIADYTYTRS ECCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEECC KSNIRRSVVEYEENPLLVKIIDNVIYNYERKFMRELNIISFEPFFNKIVQEGEIEVENIY HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHCCCEEEEEEE NTYVKIHNTSYYKDKFRKIPSFKISKIGMEYFYSKY EEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MNDAYVFKDDNRYGEYCDAVNIGDINVNFKPTEFIEKFIKSSYNIKKVNLNYTVLIGTYT CCCCEEEECCCCCCCCCCEEEECEEEECCCHHHHHHHHHHCCCCEEEEECEEEEEEEEEE LEDGKKIDYYYKPYIILEKDSEENYENSVQKISMADMKKASEEAQIRKYDFIADYTYTRS ECCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEECC KSNIRRSVVEYEENPLLVKIIDNVIYNYERKFMRELNIISFEPFFNKIVQEGEIEVENIY HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHCCCEEEEEEE NTYVKIHNTSYYKDKFRKIPSFKISKIGMEYFYSKY EEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA