| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934588
Identifier: 187934588
GI number: 187934588
Start: 3297450
End: 3299201
Strand: Reverse
Name: 187934588
Synonym: CLL_A3177
Alternate gene names: NA
Gene position: 3299201-3297450 (Counterclockwise)
Preceding gene: 187934015
Following gene: 187935160
Centisome position: 86.81
GC content: 22.89
Gene sequence:
>1752_bases ATGAAAAAATTACTTGGTTTTATAATTTTACTAGTGGTTATATTTTCATGTATTTGTTATCAAAAAGGTATAAAAAAAGG TAATGAAGAGGTTGAAGTATTAAATGCAGATGTTAGTGTTAATAATATAAAGAACATTATTGATATAAAAGATGAAACTA GTGATGAATATGAAGAAGTTCCATTAGGCTACATTAATGGAGAGATATATTTAATGAAATATGATTCAACTAATAAAAAA TTATATAATAATAATATCTTTATTTTGAATAAAGATGGTAGTACTAAAGAGTGTGGCATAAAATTACCAGATAATTATTT GAATTGTGAATTATATGTTTATGGGGATAAAATTTTGGGGAGGGATGGATATTTTAACTGGCAATCAGGAAAAGAATACA AACTTTTTCCTGATGAAGAAGAAGAATTATTTAATATAGGTTGTTATTCTGTTTCAGGAAATAGTGATTATTACTTATTT GCAAAAAATAACCCACAGAATAAAAAATACATATTATATAATATTAATAGTAATGATAATTATGAATTTCAATGTAATAA TAGTGAAGATGTTATAAATGGTGTATTTTACGATAACATATCAAAAAAATTTTATGCTATGTGTCCCAATAATGTAATAA AAGAAATATATATTGATGGAGGTAACTTTACACTAGAAAAATATGATGATATAAAAGTCTTAAATAAAAATATTATAGAG AAAAATAAAGAATTTAACAATAAGTATATATATTGTTCGGAAGGTCAGGCATATATAGGTTTAGATTATAATGATAAAGT TCAGGATAGTATTAATATTAATCAATATGATATAGCTGATAAATTCACAGAACAATTAGATAATATAACTCTATACGGAT ATGATAGTTTTTATAAGGAATATATATTAATTAAAAAAGATGATGATAAAAGTGCAAAAAAGATATATTTGGCTAAACTT GAAAAAAATGGACTTGATATGCTTATTGAAGTTCCCAAAATATATGGTGATGAAAGTAAAATAAGTATTCATATGCTTAA TTCAGAAAATGTATTAGTTAAAGAAGAAAATTATGATAAAGAAAATAAAAAGATTAAAAATAGATATATAGTTTATGATT TAGTTGAGTATTTTCAAGAAAACACAAATAAATTGAAAATTGATAATGATAAATTAACATTAAAAAATACTTATAAAAAT ATTAATGAATATAATAATTATGCCTCTAATGATAAAAATAAATTTAATGAAAATGAAGAAAATAAAAATGTCAAAGAAGT TGAGCCAAATAACTCAACATTAAAAGATGATACATCAAAATATAATAATAAATCGAATTTTAGTGATACAGAGGAAAATG ATTATAGGGAGCACGATTCAGCATGGAGGAAGGGTAATGGTGAATGGTATTATTATAAAGACAATGAGGAAAAGGTTATA GGATGGTTGAAAACTGAAAAAGGTTGGTACTATTTTTATAAAGATGGAACTATGCAAAAAGATGCAATAGTTATTGGCCA AAATGGTAAAGAGTATGTATTAGGACATGATGGATTGGTAATTAATCCAAATTCAGAATTAGAGTTTGATTTTGATAGAA ATAAAGAAAAAATAGATAATAGTAGTAACAATAATAGTAGTGATAAAAATAGTAACAACAAAATAAAAGATAACAATAAT ACCAACAAAGATTCTAATATTTCAGATTCAACTAAAGATAAAGGGTTGAATGATGATAATAATAAAGAATGA
Upstream 100 bases:
>100_bases TTTAAAAAGCACAATAAAAATGGATTATTTAACAATTGTGTAATAAGTTTGTTTTATAATTATTTTTATTATATATGTGT TGAGTATAGGGAGGATAAAA
Downstream 100 bases:
>100_bases TAATATTCTTAAAATTATTTTATTGCTTATTTAGGAATGGAATAAAGGAAACTGAACTCACATTGTTTGAATTTATTCAA ACTAATGTGAGTTTAAATTA
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MKKLLGFIILLVVIFSCICYQKGIKKGNEEVEVLNADVSVNNIKNIIDIKDETSDEYEEVPLGYINGEIYLMKYDSTNKK LYNNNIFILNKDGSTKECGIKLPDNYLNCELYVYGDKILGRDGYFNWQSGKEYKLFPDEEEELFNIGCYSVSGNSDYYLF AKNNPQNKKYILYNINSNDNYEFQCNNSEDVINGVFYDNISKKFYAMCPNNVIKEIYIDGGNFTLEKYDDIKVLNKNIIE KNKEFNNKYIYCSEGQAYIGLDYNDKVQDSININQYDIADKFTEQLDNITLYGYDSFYKEYILIKKDDDKSAKKIYLAKL EKNGLDMLIEVPKIYGDESKISIHMLNSENVLVKEENYDKENKKIKNRYIVYDLVEYFQENTNKLKIDNDKLTLKNTYKN INEYNNYASNDKNKFNENEENKNVKEVEPNNSTLKDDTSKYNNKSNFSDTEENDYREHDSAWRKGNGEWYYYKDNEEKVI GWLKTEKGWYYFYKDGTMQKDAIVIGQNGKEYVLGHDGLVINPNSELEFDFDRNKEKIDNSSNNNSSDKNSNNKIKDNNN TNKDSNISDSTKDKGLNDDNNKE
Sequences:
>Translated_583_residues MKKLLGFIILLVVIFSCICYQKGIKKGNEEVEVLNADVSVNNIKNIIDIKDETSDEYEEVPLGYINGEIYLMKYDSTNKK LYNNNIFILNKDGSTKECGIKLPDNYLNCELYVYGDKILGRDGYFNWQSGKEYKLFPDEEEELFNIGCYSVSGNSDYYLF AKNNPQNKKYILYNINSNDNYEFQCNNSEDVINGVFYDNISKKFYAMCPNNVIKEIYIDGGNFTLEKYDDIKVLNKNIIE KNKEFNNKYIYCSEGQAYIGLDYNDKVQDSININQYDIADKFTEQLDNITLYGYDSFYKEYILIKKDDDKSAKKIYLAKL EKNGLDMLIEVPKIYGDESKISIHMLNSENVLVKEENYDKENKKIKNRYIVYDLVEYFQENTNKLKIDNDKLTLKNTYKN INEYNNYASNDKNKFNENEENKNVKEVEPNNSTLKDDTSKYNNKSNFSDTEENDYREHDSAWRKGNGEWYYYKDNEEKVI GWLKTEKGWYYFYKDGTMQKDAIVIGQNGKEYVLGHDGLVINPNSELEFDFDRNKEKIDNSSNNNSSDKNSNNKIKDNNN TNKDSNISDSTKDKGLNDDNNKE >Mature_583_residues MKKLLGFIILLVVIFSCICYQKGIKKGNEEVEVLNADVSVNNIKNIIDIKDETSDEYEEVPLGYINGEIYLMKYDSTNKK LYNNNIFILNKDGSTKECGIKLPDNYLNCELYVYGDKILGRDGYFNWQSGKEYKLFPDEEEELFNIGCYSVSGNSDYYLF AKNNPQNKKYILYNINSNDNYEFQCNNSEDVINGVFYDNISKKFYAMCPNNVIKEIYIDGGNFTLEKYDDIKVLNKNIIE KNKEFNNKYIYCSEGQAYIGLDYNDKVQDSININQYDIADKFTEQLDNITLYGYDSFYKEYILIKKDDDKSAKKIYLAKL EKNGLDMLIEVPKIYGDESKISIHMLNSENVLVKEENYDKENKKIKNRYIVYDLVEYFQENTNKLKIDNDKLTLKNTYKN INEYNNYASNDKNKFNENEENKNVKEVEPNNSTLKDDTSKYNNKSNFSDTEENDYREHDSAWRKGNGEWYYYKDNEEKVI GWLKTEKGWYYFYKDGTMQKDAIVIGQNGKEYVLGHDGLVINPNSELEFDFDRNKEKIDNSSNNNSSDKNSNNKIKDNNN TNKDSNISDSTKDKGLNDDNNKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68306; Mature: 68306
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLGFIILLVVIFSCICYQKGIKKGNEEVEVLNADVSVNNIKNIIDIKDETSDEYEEV CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEHHCCCEEEECCCCCCCHHHHC PLGYINGEIYLMKYDSTNKKLYNNNIFILNKDGSTKECGIKLPDNYLNCELYVYGDKILG CEEEECCEEEEEEECCCCCEEECCEEEEEECCCCCCCCCEECCCCCEEEEEEEECCEEEC RDGYFNWQSGKEYKLFPDEEEELFNIGCYSVSGNSDYYLFAKNNPQNKKYILYNINSNDN CCCEEECCCCCEEECCCCCCHHEEEEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCC YEFQCNNSEDVINGVFYDNISKKFYAMCPNNVIKEIYIDGGNFTLEKYDDIKVLNKNIIE EEEEECCCCHHEEEEECCCCCCEEEEECCCCCEEEEEECCCCEEEECCCCHHHHHHHHHH KNKEFNNKYIYCSEGQAYIGLDYNDKVQDSININQYDIADKFTEQLDNITLYGYDSFYKE CCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCEEEEEEHHHCEE YILIKKDDDKSAKKIYLAKLEKNGLDMLIEVPKIYGDESKISIHMLNSENVLVKEENYDK EEEEECCCCCCCCEEEEEEECCCCCEEEEEEHHHCCCCCEEEEEEECCCCEEEECCCCCC ENKKIKNRYIVYDLVEYFQENTNKLKIDNDKLTLKNTYKNINEYNNYASNDKNKFNENEE HHHHHHHEEEHHHHHHHHHCCCCEEEECCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCC NKNVKEVEPNNSTLKDDTSKYNNKSNFSDTEENDYREHDSAWRKGNGEWYYYKDNEEKVI CCCCCEECCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEE GWLKTEKGWYYFYKDGTMQKDAIVIGQNGKEYVLGHDGLVINPNSELEFDFDRNKEKIDN EEEEECCCEEEEEECCCCCCCEEEECCCCCEEEEECCCEEECCCCCEEECCCCCHHHCCC SSNNNSSDKNSNNKIKDNNNTNKDSNISDSTKDKGLNDDNNKE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC >Mature Secondary Structure MKKLLGFIILLVVIFSCICYQKGIKKGNEEVEVLNADVSVNNIKNIIDIKDETSDEYEEV CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEHHCCCEEEECCCCCCCHHHHC PLGYINGEIYLMKYDSTNKKLYNNNIFILNKDGSTKECGIKLPDNYLNCELYVYGDKILG CEEEECCEEEEEEECCCCCEEECCEEEEEECCCCCCCCCEECCCCCEEEEEEEECCEEEC RDGYFNWQSGKEYKLFPDEEEELFNIGCYSVSGNSDYYLFAKNNPQNKKYILYNINSNDN CCCEEECCCCCEEECCCCCCHHEEEEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCC YEFQCNNSEDVINGVFYDNISKKFYAMCPNNVIKEIYIDGGNFTLEKYDDIKVLNKNIIE EEEEECCCCHHEEEEECCCCCCEEEEECCCCCEEEEEECCCCEEEECCCCHHHHHHHHHH KNKEFNNKYIYCSEGQAYIGLDYNDKVQDSININQYDIADKFTEQLDNITLYGYDSFYKE CCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCEEEEEEHHHCEE YILIKKDDDKSAKKIYLAKLEKNGLDMLIEVPKIYGDESKISIHMLNSENVLVKEENYDK EEEEECCCCCCCCEEEEEEECCCCCEEEEEEHHHCCCCCEEEEEEECCCCEEEECCCCCC ENKKIKNRYIVYDLVEYFQENTNKLKIDNDKLTLKNTYKNINEYNNYASNDKNKFNENEE HHHHHHHEEEHHHHHHHHHCCCCEEEECCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCC NKNVKEVEPNNSTLKDDTSKYNNKSNFSDTEENDYREHDSAWRKGNGEWYYYKDNEEKVI CCCCCEECCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEE GWLKTEKGWYYFYKDGTMQKDAIVIGQNGKEYVLGHDGLVINPNSELEFDFDRNKEKIDN EEEEECCCEEEEEECCCCCCCEEEECCCCCEEEEECCCEEECCCCCEEECCCCCHHHCCC SSNNNSSDKNSNNKIKDNNNTNKDSNISDSTKDKGLNDDNNKE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA