| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is wcaI [C]
Identifier: 187935160
GI number: 187935160
Start: 3295797
End: 3297017
Strand: Reverse
Name: wcaI [C]
Synonym: CLL_A3176
Alternate gene names: 187935160
Gene position: 3297017-3295797 (Counterclockwise)
Preceding gene: 187934588
Following gene: 187932756
Centisome position: 86.76
GC content: 29.24
Gene sequence:
>1221_bases ATGAATATCTTACTTATAAATCACTATGCAGGATCTGATTATCACGGAATGGAATTTAGACCATATTATATGGCTAGAGA ATGGAAGAGTATGGGACATAATGTTACTATATTAGGTGCTAATTTTTCTCATTTAAGAAAAAATAATCCTAAGATTACAG AGGATTTTGAAGAAGAAATAATAGATGGAATTACATATGTATGGGTTAAAACACCAGAGTACAGTGGAAATGGAATTGGA AGAATAAAAAATATATCAACGTTTATGTATAAATTAAGAATGAATTATAAAAAAATTGCAGATAAATATAAACCTGACGC AGTTATAGCATCATCTACATATCCTTTGGATATATATCCAGCTCATAGAATAGCTAAGAGATGTGATGCAAAACTTTGCT TTGAAATACATGATTTATGGCCACTTAGCCCTATGGAAATTGGAGGATTTTCTGAGAAAAATCCAGCAATAGTAGTACTT CAAAGAGCGGAAGATTTTGCTTATAAAAATTCAGACGTTATTGTATCGATTTTACCTAATGCAGATAAGCATATAAGGGA AAGAGGATTTTCAACTGATAAGTATGTGTATGTTCCAAATGGAATAATACTTGGTGAAAAGAAAAATCCACCAACAGAAA AGACCATTGAAAGACTTAAGGAATTAAAAGATCAAGGTTATTTCTTAGTTGGATATACAGGAAATCATTCACCAGCTAAT GTATTAGATACAATGATAGATGCAGCAAAGAAAACTAAAGATGAAAAAGTTAAGTATGTTTTAGTTGGAAAAGGAAATGT GAAAGACGAATTAATTAATTATGCAAAAACTAATGATGTACAAAATGTGGAGTTTTTAGATCCAGTATTAAAAGATAATA TGGATAATGCACTACAATTATTAGATATTTGTTATATAAGTTTAAAGAAACAAAATTTATTTAATTATGGAGTTAGTCCA AATAAATTATTTGACTATATGATGGCGGCAAGACCTGTAATTTATGCAATAGAGGCATCAAATGATCCAGTTAAGGATTC TAACTGTGGAATAACAGTACCAGCAGAAAATCCTGATGCAGTAGTTGAAGCTGTATTAAAAATTAAAGAGTTAAGTGATG AGGAAAAGAATAAAATGGGTCAAAACGGAAATGACTATGTATTAAAAAATCATACTTATCATGGTTTAGCAGTGAAATTT TTAAATGCTTTAAAGAAATAA
Upstream 100 bases:
>100_bases TAAAAAAATAACAAAAAGGATTGAAAAATAATATAGATTTAATTTTGACGTATTTAAATTATTAAGTTATAGATTACATA ATTTAAGGAGAGAAATTTAA
Downstream 100 bases:
>100_bases GTTAAGAATTTATGAAGAATTGATATATTTATAACTTAAGTTATTTAAAAATGATAAAATATCTATTAAATATATTGTTG ATAAATTATGCAATAATATA
Product: WblI protein
Products: NA
Alternate protein names: Glycosyl Transferase; Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Protein; Lipopolysaccharide Biosynthesis Protein; Glycosyl Transferase Group 1 Family Protein; WblI Protein; Colanic Acid Biosynthesis Glycosyl Transferase; Glycosyltransferase-Like Protein; Lipopolysaccharides Biosynthesis Glycosyltransferase; Capsular Polysaccharide Biosynthesis F; Glycosyltransferase Protein; Phosphoserine Aminotransferase; A-Glycosyltransferase; Group Glycosyltransferase; Group 1 Family Glycosyltransferase; Glycosyltransferase Group 1 Family; Glycosyltransferase Group 1 Protein; Glycosyl Transferase Group 1 Family; LPS Biosynthesis Related Glycosyltransferase; Glycosyl Transferase WbpJ; Glycosyl Transferase Family Protein; Glycosil Transferase; Glycosyltransferase Group 1 Family Protein
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MNILLINHYAGSDYHGMEFRPYYMAREWKSMGHNVTILGANFSHLRKNNPKITEDFEEEIIDGITYVWVKTPEYSGNGIG RIKNISTFMYKLRMNYKKIADKYKPDAVIASSTYPLDIYPAHRIAKRCDAKLCFEIHDLWPLSPMEIGGFSEKNPAIVVL QRAEDFAYKNSDVIVSILPNADKHIRERGFSTDKYVYVPNGIILGEKKNPPTEKTIERLKELKDQGYFLVGYTGNHSPAN VLDTMIDAAKKTKDEKVKYVLVGKGNVKDELINYAKTNDVQNVEFLDPVLKDNMDNALQLLDICYISLKKQNLFNYGVSP NKLFDYMMAARPVIYAIEASNDPVKDSNCGITVPAENPDAVVEAVLKIKELSDEEKNKMGQNGNDYVLKNHTYHGLAVKF LNALKK
Sequences:
>Translated_406_residues MNILLINHYAGSDYHGMEFRPYYMAREWKSMGHNVTILGANFSHLRKNNPKITEDFEEEIIDGITYVWVKTPEYSGNGIG RIKNISTFMYKLRMNYKKIADKYKPDAVIASSTYPLDIYPAHRIAKRCDAKLCFEIHDLWPLSPMEIGGFSEKNPAIVVL QRAEDFAYKNSDVIVSILPNADKHIRERGFSTDKYVYVPNGIILGEKKNPPTEKTIERLKELKDQGYFLVGYTGNHSPAN VLDTMIDAAKKTKDEKVKYVLVGKGNVKDELINYAKTNDVQNVEFLDPVLKDNMDNALQLLDICYISLKKQNLFNYGVSP NKLFDYMMAARPVIYAIEASNDPVKDSNCGITVPAENPDAVVEAVLKIKELSDEEKNKMGQNGNDYVLKNHTYHGLAVKF LNALKK >Mature_406_residues MNILLINHYAGSDYHGMEFRPYYMAREWKSMGHNVTILGANFSHLRKNNPKITEDFEEEIIDGITYVWVKTPEYSGNGIG RIKNISTFMYKLRMNYKKIADKYKPDAVIASSTYPLDIYPAHRIAKRCDAKLCFEIHDLWPLSPMEIGGFSEKNPAIVVL QRAEDFAYKNSDVIVSILPNADKHIRERGFSTDKYVYVPNGIILGEKKNPPTEKTIERLKELKDQGYFLVGYTGNHSPAN VLDTMIDAAKKTKDEKVKYVLVGKGNVKDELINYAKTNDVQNVEFLDPVLKDNMDNALQLLDICYISLKKQNLFNYGVSP NKLFDYMMAARPVIYAIEASNDPVKDSNCGITVPAENPDAVVEAVLKIKELSDEEKNKMGQNGNDYVLKNHTYHGLAVKF LNALKK
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46169; Mature: 46169
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILLINHYAGSDYHGMEFRPYYMAREWKSMGHNVTILGANFSHLRKNNPKITEDFEEEI CEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCCCHHHHHHH IDGITYVWVKTPEYSGNGIGRIKNISTFMYKLRMNYKKIADKYKPDAVIASSTYPLDIYP HCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCCCEECCC AHRIAKRCDAKLCFEIHDLWPLSPMEIGGFSEKNPAIVVLQRAEDFAYKNSDVIVSILPN HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCC ADKHIRERGFSTDKYVYVPNGIILGEKKNPPTEKTIERLKELKDQGYFLVGYTGNHSPAN CHHHHHHCCCCCCCEEECCCEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHH VLDTMIDAAKKTKDEKVKYVLVGKGNVKDELINYAKTNDVQNVEFLDPVLKDNMDNALQL HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHH LDICYISLKKQNLFNYGVSPNKLFDYMMAARPVIYAIEASNDPVKDSNCGITVPAENPDA HHHHHHHHHHCHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCHHH VVEAVLKIKELSDEEKNKMGQNGNDYVLKNHTYHGLAVKFLNALKK HHHHHHHHHHCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCC >Mature Secondary Structure MNILLINHYAGSDYHGMEFRPYYMAREWKSMGHNVTILGANFSHLRKNNPKITEDFEEEI CEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCCCHHHHHHH IDGITYVWVKTPEYSGNGIGRIKNISTFMYKLRMNYKKIADKYKPDAVIASSTYPLDIYP HCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCCCEECCC AHRIAKRCDAKLCFEIHDLWPLSPMEIGGFSEKNPAIVVLQRAEDFAYKNSDVIVSILPN HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCC ADKHIRERGFSTDKYVYVPNGIILGEKKNPPTEKTIERLKELKDQGYFLVGYTGNHSPAN CHHHHHHCCCCCCCEEECCCEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHH VLDTMIDAAKKTKDEKVKYVLVGKGNVKDELINYAKTNDVQNVEFLDPVLKDNMDNALQL HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHH LDICYISLKKQNLFNYGVSPNKLFDYMMAARPVIYAIEASNDPVKDSNCGITVPAENPDA HHHHHHHHHHCHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCHHH VVEAVLKIKELSDEEKNKMGQNGNDYVLKNHTYHGLAVKFLNALKK HHHHHHHHHHCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA