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The map label for this gene is ykrA [H]

Identifier: 187934535

GI number: 187934535

Start: 3095118

End: 3095963

Strand: Reverse

Name: ykrA [H]

Synonym: CLL_A2998

Alternate gene names: 187934535

Gene position: 3095963-3095118 (Counterclockwise)

Preceding gene: 187933217

Following gene: 187933613

Centisome position: 81.47

GC content: 27.42

Gene sequence:

>846_bases
ATGATAATAAACGATATAAAATCAGAGCAAACAAGAAAAGGGGCTGTAATTATGAAAAAAATTATATTTTTAGATATAGA
TGGAACATTATTAGATTGTTTTAATGGATTGTTAGATATCACACCAAAAGTCAAAGAAGTAATTCATTCATTACAAGCTA
ATGGGGATTATGTTTTTATTGCTTCTGGTAGACCATATGCATTTTTAAGCCAAGCTATATTAGATTTTGGATTTGATGGT
TTTATTTTAGCAAATGGAGCTCAAGTAATAATTGATAATAACACTATATATAGTGATCCTATTAATAAAGAGTTTGTAAA
AAATCTAATATCTGAATTTGAAAGAAATAATATACAATATATCTTAGAAGGAGAATTTTACTCATATATGAAGGACTGCT
ATAAAGAATTTTATGATCTTTATGAAAGTTTAGGTGTTTCAAGAAGATATATAAAGAGTGCTTATGATATTGAAGAAATT
GATGTTCATAAAGTAGAAATGTTATGCACTGATGTAGAGGCTTCAAGATTATGTTTATCATTAGTAAAGAGTGCTTCTAA
TTATGATTATTTTAGTAGTATGGATGAGAAATCTTTTGAATTATATTCAAAGAAAAATACTAAAGCAACTGGAATATTAA
AAGCTCTAGATTATTTGGGCATTCCAATTGAAAATAGTTATGCATTTGGAGATGGAAAAAATGATATAGAAATGTTATCA
GCAGTTGGATGTGGAATAGCAATGGGAAATGCATGTGATGAGGTTAAAAGACATGCAAAAGAAGTTACAGATACTGTACA
TAATGATGGGGTAGCAATGGGTATAGAAAAATATGTAGTTTGCTAA

Upstream 100 bases:

>100_bases
AAAATATATCTATAACGCTCTTCTATAAACATTTGTGTATCTCCTTAAATTATTATTTATTATCATTTTAATACAAAATA
ACTGCAAATTCAATTGACAA

Downstream 100 bases:

>100_bases
AGAAATAGAAAATTTTAATATATTAATTTCATGAAGATATTATCTGAAAAAGATGATTTTAAGTTAGAGGATTAAAATTA
GAATGTGCTAGGAAAACCGT

Product: phosphatase YidA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MIINDIKSEQTRKGAVIMKKIIFLDIDGTLLDCFNGLLDITPKVKEVIHSLQANGDYVFIASGRPYAFLSQAILDFGFDG
FILANGAQVIIDNNTIYSDPINKEFVKNLISEFERNNIQYILEGEFYSYMKDCYKEFYDLYESLGVSRRYIKSAYDIEEI
DVHKVEMLCTDVEASRLCLSLVKSASNYDYFSSMDEKSFELYSKKNTKATGILKALDYLGIPIENSYAFGDGKNDIEMLS
AVGCGIAMGNACDEVKRHAKEVTDTVHNDGVAMGIEKYVVC

Sequences:

>Translated_281_residues
MIINDIKSEQTRKGAVIMKKIIFLDIDGTLLDCFNGLLDITPKVKEVIHSLQANGDYVFIASGRPYAFLSQAILDFGFDG
FILANGAQVIIDNNTIYSDPINKEFVKNLISEFERNNIQYILEGEFYSYMKDCYKEFYDLYESLGVSRRYIKSAYDIEEI
DVHKVEMLCTDVEASRLCLSLVKSASNYDYFSSMDEKSFELYSKKNTKATGILKALDYLGIPIENSYAFGDGKNDIEMLS
AVGCGIAMGNACDEVKRHAKEVTDTVHNDGVAMGIEKYVVC
>Mature_281_residues
MIINDIKSEQTRKGAVIMKKIIFLDIDGTLLDCFNGLLDITPKVKEVIHSLQANGDYVFIASGRPYAFLSQAILDFGFDG
FILANGAQVIIDNNTIYSDPINKEFVKNLISEFERNNIQYILEGEFYSYMKDCYKEFYDLYESLGVSRRYIKSAYDIEEI
DVHKVEMLCTDVEASRLCLSLVKSASNYDYFSSMDEKSFELYSKKNTKATGILKALDYLGIPIENSYAFGDGKNDIEMLS
AVGCGIAMGNACDEVKRHAKEVTDTVHNDGVAMGIEKYVVC

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=284, Percent_Identity=29.9295774647887, Blast_Score=85, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 31627; Mature: 31627

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIINDIKSEQTRKGAVIMKKIIFLDIDGTLLDCFNGLLDITPKVKEVIHSLQANGDYVFI
CCCCCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEE
ASGRPYAFLSQAILDFGFDGFILANGAQVIIDNNTIYSDPINKEFVKNLISEFERNNIQY
ECCCCHHHHHHHHHHCCCCCEEEECCCEEEEECCEEECCCCCHHHHHHHHHHHHCCCCEE
ILEGEFYSYMKDCYKEFYDLYESLGVSRRYIKSAYDIEEIDVHKVEMLCTDVEASRLCLS
EECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHH
LVKSASNYDYFSSMDEKSFELYSKKNTKATGILKALDYLGIPIENSYAFGDGKNDIEMLS
HHHHCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHH
AVGCGIAMGNACDEVKRHAKEVTDTVHNDGVAMGIEKYVVC
HHHCHHHCCCHHHHHHHHHHHHHHHHHCCCCEECHHHHCCC
>Mature Secondary Structure
MIINDIKSEQTRKGAVIMKKIIFLDIDGTLLDCFNGLLDITPKVKEVIHSLQANGDYVFI
CCCCCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEE
ASGRPYAFLSQAILDFGFDGFILANGAQVIIDNNTIYSDPINKEFVKNLISEFERNNIQY
ECCCCHHHHHHHHHHCCCCCEEEECCCEEEEECCEEECCCCCHHHHHHHHHHHHCCCCEE
ILEGEFYSYMKDCYKEFYDLYESLGVSRRYIKSAYDIEEIDVHKVEMLCTDVEASRLCLS
EECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHH
LVKSASNYDYFSSMDEKSFELYSKKNTKATGILKALDYLGIPIENSYAFGDGKNDIEMLS
HHHHCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHH
AVGCGIAMGNACDEVKRHAKEVTDTVHNDGVAMGIEKYVVC
HHHCHHHCCCHHHHHHHHHHHHHHHHHCCCCEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]