| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934472
Identifier: 187934472
GI number: 187934472
Start: 2465320
End: 2465868
Strand: Reverse
Name: 187934472
Synonym: CLL_A2374
Alternate gene names: NA
Gene position: 2465868-2465320 (Counterclockwise)
Preceding gene: 187933701
Following gene: 187934387
Centisome position: 64.89
GC content: 27.69
Gene sequence:
>549_bases ATGGATAATAATAGTTTTTATGATTTAGATGAGATATTAAAGCATCTGGGCTATAAAAGATGTAAAAATGATAATTCAGA TGATAAATGTAAGGAAAAAGATGAAGAAATAGAGTGTAAAATTGATCCAACTGCTGGAGCAAGTACAAATGATTGTAAAA ATTTAAACTTAGATATGCCGTACGGATTTCAAGATTTAGATCCTATGTTAATGTTAGTTATTGGAGAATTGATAGCAAAT GCAATATCTAGTAAACTACCGTCTAGTTTATTAAATGCTTACGGAAACTGGTTACAATTAGTAGGACAAGTAATTGAAAC ATTTAATGCACAGCAACAGTATCAAGAATGTGGACCAGGAAGATATTATAATCCAATGTATAAAAATGTGGCTAATCCAT TTTGTTCAAATGATGATGTGAAATTTCAAAAAGAGGGAAGAAGCCAAAAAAGAAACAAAAAGGATAATTGTGATAAGATA AAAAAATTAACTTTAAGGGTAAATGAATTGGAAAAAGAGATAGAAAAATTAAAGAAAAAATCTAAATAA
Upstream 100 bases:
>100_bases TAGTAAATAGACTAACCGCGAAAATTACTTATAGATTAATATAATATTAGATTCCTATATGGATAGTTAATAGTTCTTAT GATTTAGATATAGGTGAGAT
Downstream 100 bases:
>100_bases ATATCTCTAATGATTACTTTACATTAGAGGTATTTTAGCGTTGAATTATTCAGTAAAATTTTTATTTATATCAGTAGTTT CTAATTGAAGAAAAGATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MDNNSFYDLDEILKHLGYKRCKNDNSDDKCKEKDEEIECKIDPTAGASTNDCKNLNLDMPYGFQDLDPMLMLVIGELIAN AISSKLPSSLLNAYGNWLQLVGQVIETFNAQQQYQECGPGRYYNPMYKNVANPFCSNDDVKFQKEGRSQKRNKKDNCDKI KKLTLRVNELEKEIEKLKKKSK
Sequences:
>Translated_182_residues MDNNSFYDLDEILKHLGYKRCKNDNSDDKCKEKDEEIECKIDPTAGASTNDCKNLNLDMPYGFQDLDPMLMLVIGELIAN AISSKLPSSLLNAYGNWLQLVGQVIETFNAQQQYQECGPGRYYNPMYKNVANPFCSNDDVKFQKEGRSQKRNKKDNCDKI KKLTLRVNELEKEIEKLKKKSK >Mature_182_residues MDNNSFYDLDEILKHLGYKRCKNDNSDDKCKEKDEEIECKIDPTAGASTNDCKNLNLDMPYGFQDLDPMLMLVIGELIAN AISSKLPSSLLNAYGNWLQLVGQVIETFNAQQQYQECGPGRYYNPMYKNVANPFCSNDDVKFQKEGRSQKRNKKDNCDKI KKLTLRVNELEKEIEKLKKKSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20961; Mature: 20961
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNNSFYDLDEILKHLGYKRCKNDNSDDKCKEKDEEIECKIDPTAGASTNDCKNLNLDMP CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCC YGFQDLDPMLMLVIGELIANAISSKLPSSLLNAYGNWLQLVGQVIETFNAQQQYQECGPG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCC RYYNPMYKNVANPFCSNDDVKFQKEGRSQKRNKKDNCDKIKKLTLRVNELEKEIEKLKKK CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC SK CC >Mature Secondary Structure MDNNSFYDLDEILKHLGYKRCKNDNSDDKCKEKDEEIECKIDPTAGASTNDCKNLNLDMP CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCC YGFQDLDPMLMLVIGELIANAISSKLPSSLLNAYGNWLQLVGQVIETFNAQQQYQECGPG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCC RYYNPMYKNVANPFCSNDDVKFQKEGRSQKRNKKDNCDKIKKLTLRVNELEKEIEKLKKK CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC SK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA