| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933701
Identifier: 187933701
GI number: 187933701
Start: 2465959
End: 2466594
Strand: Reverse
Name: 187933701
Synonym: CLL_A2375
Alternate gene names: NA
Gene position: 2466594-2465959 (Counterclockwise)
Preceding gene: 187935139
Following gene: 187934472
Centisome position: 64.9
GC content: 26.1
Gene sequence:
>636_bases ATGGATTTAAATAATTTTAGTGGAATTGAAGAACTTTTAAAGTATTTAGGGTATGAAAAAATCACTGAAGAAGATGATGA TGAATTAACTGAATCCAATAAATCAAGTAATGAAAGTGACACAAGTAATTGCAAATGTAAAATAGATCCAACTGCAGGTG CAAGTACAAATTGGTATGCTAAGTTGAATTTAGATATACCGGGGGGATTTCAAGATATAAATCCAATATTATTTATAACT TTAGGAGAAGTTATAGGAAATGTTATTTCTGGGCAGTTACCTTACAATGTTGCTAATACTATATCTAATCTTATTATTCT TGTTGGTCAAATAATAGAAACTTGTGGTACACAGCAACAATATTATGAGATAGGGCCAGGAAGGTATTTTAATTGTTCAT ATAAAAATATTGAAAATCCTTTTTGCGATTTTGATATGACGAAAGAAGGGAATTTAAATAACACTAATGATTTAAAAAAA GATAATTTAAATCAAGATAAAGGTTCAATGCAAAAATGCAATAATGTAAATGATATATATTTAAAATTAGAAAATTTAGA ATGTGAATTTGGTAGAATTCTAACTAAAGTGTATGAATTAGAAAAAAGAATAGAAAAGATAGAAAATAGTAAATAG
Upstream 100 bases:
>100_bases ATATAAAATAAGACTTTATGAGTAATATAAAACATAGTATGTATCAGATATTTAAATTCTGTGTAATATAATAGTAGAAT TATTAATTATAAGGTGAGAT
Downstream 100 bases:
>100_bases ACTAACCGCGAAAATTACTTATAGATTAATATAATATTAGATTCCTATATGGATAGTTAATAGTTCTTATGATTTAGATA TAGGTGAGATATGGATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MDLNNFSGIEELLKYLGYEKITEEDDDELTESNKSSNESDTSNCKCKIDPTAGASTNWYAKLNLDIPGGFQDINPILFIT LGEVIGNVISGQLPYNVANTISNLIILVGQIIETCGTQQQYYEIGPGRYFNCSYKNIENPFCDFDMTKEGNLNNTNDLKK DNLNQDKGSMQKCNNVNDIYLKLENLECEFGRILTKVYELEKRIEKIENSK
Sequences:
>Translated_211_residues MDLNNFSGIEELLKYLGYEKITEEDDDELTESNKSSNESDTSNCKCKIDPTAGASTNWYAKLNLDIPGGFQDINPILFIT LGEVIGNVISGQLPYNVANTISNLIILVGQIIETCGTQQQYYEIGPGRYFNCSYKNIENPFCDFDMTKEGNLNNTNDLKK DNLNQDKGSMQKCNNVNDIYLKLENLECEFGRILTKVYELEKRIEKIENSK >Mature_211_residues MDLNNFSGIEELLKYLGYEKITEEDDDELTESNKSSNESDTSNCKCKIDPTAGASTNWYAKLNLDIPGGFQDINPILFIT LGEVIGNVISGQLPYNVANTISNLIILVGQIIETCGTQQQYYEIGPGRYFNCSYKNIENPFCDFDMTKEGNLNNTNDLKK DNLNQDKGSMQKCNNVNDIYLKLENLECEFGRILTKVYELEKRIEKIENSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23917; Mature: 23917
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLNNFSGIEELLKYLGYEKITEEDDDELTESNKSSNESDTSNCKCKIDPTAGASTNWYA CCCCCCCCHHHHHHHCCCHHCCCCCCHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEE KLNLDIPGGFQDINPILFITLGEVIGNVISGQLPYNVANTISNLIILVGQIIETCGTQQQ EEEEECCCCCCCCCHHHEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC YYEIGPGRYFNCSYKNIENPFCDFDMTKEGNLNNTNDLKKDNLNQDKGSMQKCNNVNDIY EEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEE LKLENLECEFGRILTKVYELEKRIEKIENSK EEEECCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDLNNFSGIEELLKYLGYEKITEEDDDELTESNKSSNESDTSNCKCKIDPTAGASTNWYA CCCCCCCCHHHHHHHCCCHHCCCCCCHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEE KLNLDIPGGFQDINPILFITLGEVIGNVISGQLPYNVANTISNLIILVGQIIETCGTQQQ EEEEECCCCCCCCCHHHEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC YYEIGPGRYFNCSYKNIENPFCDFDMTKEGNLNNTNDLKKDNLNQDKGSMQKCNNVNDIY EEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEE LKLENLECEFGRILTKVYELEKRIEKIENSK EEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA