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The map label for this gene is spoVR [H]

Identifier: 187934462

GI number: 187934462

Start: 3196483

End: 3197853

Strand: Reverse

Name: spoVR [H]

Synonym: CLL_A3090

Alternate gene names: 187934462

Gene position: 3197853-3196483 (Counterclockwise)

Preceding gene: 187933289

Following gene: 187934637

Centisome position: 84.15

GC content: 27.57

Gene sequence:

>1371_bases
ATGAGCTACACTTTAAGGGAGATTGAAGAATGGAACGATAAAATAGAGAAAAAAGTAATAGAATATGGATTAGACTTTTA
CAATCAAGAATTTGAATTTATAGACTTTAACGAGATGTTGGGATATGAATCTTATGTAGGAATGCCATCCAAATATCCTC
ATTGGAGCTATGGTAAAGCCTATGAAAAAAATAAAATGTTGTATTCATTAAATCTTACAGGACTTCCTTATGAAATGGTA
ATTAATTCTGATCCTTGTTTGGCATATTTAATGAAAGAAAATACATTATTACTTCAAATACTAACTATGGCTCATGTATA
TGGACATAATGATTTTTTTAAGAATAATAGATTATTTAAGGAAGGAACTAATGCAAAATATGCCATTGAAATGTTTAAAC
TAGATGCTGATATTATAAGAAGATATATTAATAACCCTAGTATTGGATATGAAAAAGTTGAAAGAATATTAGATGCAGCA
CATGCTATAAGGTATCAAATTGGAAGGGTTATTGGAGTTAAAAAGTTATCACATGAAGAAATAAAACAAAGTATGATTAA
AGATTATGAAAGTAAATTAGATAATAGAGGAATATTAAATCAAGATGAAAAGATTGAGTTTCCTGATTTAGATAAAATTC
CAATAGAACCAGAAGATGATGTAGTAGATTTTATAATAAAGTATGGTGACTTACAAGAATGGGAAAGAACAGTTTTGAAA
ATTGTAAAAAGAGAAACAGAGTATTTCCTTCCTCAAATGGAAACCAAAATAATGAATGAGGGATGGGCAAGCTACACTCA
TTATAATATATTGAAGGAATTAAACTTACCAGATGGACTTCACTTTGAATTTTTAAAAAGGCATAATGATGTTATAGCCC
CTATTGTAGGAGGTTTAAATCCTTATTATGTAGGCTTTAAAATATTTGAGGACTTAGATAAAAAATATGGCAAAGAAAAA
ATATTTGAAGTAAGAGAAATTGAAAGAGATAGTTCATTCTTGAGGAGATATTTGACTAGAGAGTTATGTGAAGAGCTTAA
TTTGTTTGAGTATAATAAAAGAACATTTGATATTGTTGTTGAAGAAGTTTCAGATGAAGAGGGTTGGAAAGAAATTAGAG
ATAATTTAAGCTATACTTGTGGTATAGGTGGAATTCCGTATATTAGAGTTATTGATCTTAACACTAAGGATTATACTTTA
ACATTAGAACATGTATTTGATGGGAGGGAATTAGAATTAAATTATGCAAAAGAAACTTTAAAATATATTCAAGAATTATG
GGGTAAAAAAGTAAGATTAATTACTAAAGACTCTGATAAAAAAGATGTTGTTATAACTTGCAATATGGATAAAGAAATTA
CAATTGGTTAA

Upstream 100 bases:

>100_bases
AATGAAAAGAATTTTATTTCTGTAGTTATTAAAGAGAAAAAGGATTTATGGGAAGCTTTAAAGACTATGCTTAAACAGGA
ATTAAAGGAGGATTAGTAAA

Downstream 100 bases:

>100_bases
ATTATTTCCCAAAAAGGATATGAGATTTTTCTTGTATCCTTTTATTTTTATGTTTAATTAAAATTTGTAAAAGATATTAT
GAATGTTATGAGTTTAGTTA

Product: stage V sporulation protein R

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MSYTLREIEEWNDKIEKKVIEYGLDFYNQEFEFIDFNEMLGYESYVGMPSKYPHWSYGKAYEKNKMLYSLNLTGLPYEMV
INSDPCLAYLMKENTLLLQILTMAHVYGHNDFFKNNRLFKEGTNAKYAIEMFKLDADIIRRYINNPSIGYEKVERILDAA
HAIRYQIGRVIGVKKLSHEEIKQSMIKDYESKLDNRGILNQDEKIEFPDLDKIPIEPEDDVVDFIIKYGDLQEWERTVLK
IVKRETEYFLPQMETKIMNEGWASYTHYNILKELNLPDGLHFEFLKRHNDVIAPIVGGLNPYYVGFKIFEDLDKKYGKEK
IFEVREIERDSSFLRRYLTRELCEELNLFEYNKRTFDIVVEEVSDEEGWKEIRDNLSYTCGIGGIPYIRVIDLNTKDYTL
TLEHVFDGRELELNYAKETLKYIQELWGKKVRLITKDSDKKDVVITCNMDKEITIG

Sequences:

>Translated_456_residues
MSYTLREIEEWNDKIEKKVIEYGLDFYNQEFEFIDFNEMLGYESYVGMPSKYPHWSYGKAYEKNKMLYSLNLTGLPYEMV
INSDPCLAYLMKENTLLLQILTMAHVYGHNDFFKNNRLFKEGTNAKYAIEMFKLDADIIRRYINNPSIGYEKVERILDAA
HAIRYQIGRVIGVKKLSHEEIKQSMIKDYESKLDNRGILNQDEKIEFPDLDKIPIEPEDDVVDFIIKYGDLQEWERTVLK
IVKRETEYFLPQMETKIMNEGWASYTHYNILKELNLPDGLHFEFLKRHNDVIAPIVGGLNPYYVGFKIFEDLDKKYGKEK
IFEVREIERDSSFLRRYLTRELCEELNLFEYNKRTFDIVVEEVSDEEGWKEIRDNLSYTCGIGGIPYIRVIDLNTKDYTL
TLEHVFDGRELELNYAKETLKYIQELWGKKVRLITKDSDKKDVVITCNMDKEITIG
>Mature_455_residues
SYTLREIEEWNDKIEKKVIEYGLDFYNQEFEFIDFNEMLGYESYVGMPSKYPHWSYGKAYEKNKMLYSLNLTGLPYEMVI
NSDPCLAYLMKENTLLLQILTMAHVYGHNDFFKNNRLFKEGTNAKYAIEMFKLDADIIRRYINNPSIGYEKVERILDAAH
AIRYQIGRVIGVKKLSHEEIKQSMIKDYESKLDNRGILNQDEKIEFPDLDKIPIEPEDDVVDFIIKYGDLQEWERTVLKI
VKRETEYFLPQMETKIMNEGWASYTHYNILKELNLPDGLHFEFLKRHNDVIAPIVGGLNPYYVGFKIFEDLDKKYGKEKI
FEVREIERDSSFLRRYLTRELCEELNLFEYNKRTFDIVVEEVSDEEGWKEIRDNLSYTCGIGGIPYIRVIDLNTKDYTLT
LEHVFDGRELELNYAKETLKYIQELWGKKVRLITKDSDKKDVVITCNMDKEITIG

Specific function: Appears to be involved in spore cortex formation [H]

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycgB [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=469, Percent_Identity=33.2622601279318, Blast_Score=242, Evalue=4e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 54150; Mature: 54018

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYTLREIEEWNDKIEKKVIEYGLDFYNQEFEFIDFNEMLGYESYVGMPSKYPHWSYGKA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCHHHCCCCCCCCCCCCCCC
YEKNKMLYSLNLTGLPYEMVINSDPCLAYLMKENTLLLQILTMAHVYGHNDFFKNNRLFK
CCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHCCCCCEE
EGTNAKYAIEMFKLDADIIRRYINNPSIGYEKVERILDAAHAIRYQIGRVIGVKKLSHEE
CCCCCEEEEHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IKQSMIKDYESKLDNRGILNQDEKIEFPDLDKIPIEPEDDVVDFIIKYGDLQEWERTVLK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
IVKRETEYFLPQMETKIMNEGWASYTHYNILKELNLPDGLHFEFLKRHNDVIAPIVGGLN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEHHHHCCCC
PYYVGFKIFEDLDKKYGKEKIFEVREIERDSSFLRRYLTRELCEELNLFEYNKRTFDIVV
CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHH
EEVSDEEGWKEIRDNLSYTCGIGGIPYIRVIDLNTKDYTLTLEHVFDGRELELNYAKETL
HHHCCCHHHHHHHHCCCEEECCCCCCEEEEEEECCCCEEEEEEECCCCCEEEHHHHHHHH
KYIQELWGKKVRLITKDSDKKDVVITCNMDKEITIG
HHHHHHCCCEEEEEECCCCCCCEEEEECCCCCEECC
>Mature Secondary Structure 
SYTLREIEEWNDKIEKKVIEYGLDFYNQEFEFIDFNEMLGYESYVGMPSKYPHWSYGKA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCHHHCCCCCCCCCCCCCCC
YEKNKMLYSLNLTGLPYEMVINSDPCLAYLMKENTLLLQILTMAHVYGHNDFFKNNRLFK
CCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHCCCCCEE
EGTNAKYAIEMFKLDADIIRRYINNPSIGYEKVERILDAAHAIRYQIGRVIGVKKLSHEE
CCCCCEEEEHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IKQSMIKDYESKLDNRGILNQDEKIEFPDLDKIPIEPEDDVVDFIIKYGDLQEWERTVLK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
IVKRETEYFLPQMETKIMNEGWASYTHYNILKELNLPDGLHFEFLKRHNDVIAPIVGGLN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEHHHHCCCC
PYYVGFKIFEDLDKKYGKEKIFEVREIERDSSFLRRYLTRELCEELNLFEYNKRTFDIVV
CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHH
EEVSDEEGWKEIRDNLSYTCGIGGIPYIRVIDLNTKDYTLTLEHVFDGRELELNYAKETL
HHHCCCHHHHHHHHCCCEEECCCCCCEEEEEEECCCCEEEEEEECCCCCEEEHHHHHHHH
KYIQELWGKKVRLITKDSDKKDVVITCNMDKEITIG
HHHHHHCCCEEEEEECCCCCCCEEEEECCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8144469; 9579061; 9384377 [H]