Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is yhbH [C]

Identifier: 187933289

GI number: 187933289

Start: 3197858

End: 3199033

Strand: Reverse

Name: yhbH [C]

Synonym: CLL_A3091

Alternate gene names: 187933289

Gene position: 3199033-3197858 (Counterclockwise)

Preceding gene: 187935417

Following gene: 187934462

Centisome position: 84.18

GC content: 29.93

Gene sequence:

>1176_bases
ATGGCAATTTTTAGAGATAGAACTGATAAGCAAGTAGATCACGATAGAGCAATAGAAGATAAAAGAAGACATAGGCAATT
AGTTGAAAAATCAATTAAGGAAAATTTAGGTGATATCTTATCTGAAGAGAGTATAGTTGGTCAAAGTAAAAATAAAAAAT
TTAAAATACCTATAAAAAGTATTAAAGAATATCAATTTGTATATGGCAAAAATTCTAAAGGGGTAGCGACTGGAACTGGT
GAAGAAAAACGTGGCGACAAAATAGAGTCAGGCTCTAAAAAAGCAATGGGAAAAGGGAATAAGGGTGCTGGTAATGAAGA
AGGTGATGAAATTTATGAAACTGAAATTACCTTGGATGAACTTATGGAATATATATCCGATGAGCTTAATTTACCGAATT
TAGATGAAAAGAAATATTCAGAAATAATAACTGACAGTTGTGGAAAGAAGAAAGGTTATCAAAGACATGGAATAAGGCCA
AGACTTGCTAAAAAAAGGACAGTTATGGCTAAGATATCTAGAAAGCAAAGCAAAAAAAGGGCTCTAATAGAAGAAGGCAA
AGATTATAAAACTGAAAGATTTCCATTTAGGGAAGAAGATCTTAGATATTACAAAGTTAAAATGCAGCCTAAAAAAGCAA
GTAATGCAGTAATGATATTTATTATGGATGCTTCAGGATCTATGGATTCAACAAAGAAATATTTAGCAAGGTCATATTTC
TTTGTATTATCTAGATTTTTAAAAAGAAAATACAACAATATAGCATTTGAATTTATATATCATACTACTATTGCTAAAAG
AGTAAGTGAGTACGAGTTCTTTCATAAATCTGAATCAGGAGGTACGTATATATCAAGCGGTATAGTAGAGGCTATAAAAT
TAATAGATGAAAAATATCCTCCAAGTGAATGGAATATATATCCTGTTTATGCTAGCGATGGTGATAACTGGTCTGAAGAT
AATGTAAAAGCAATAGAATCAGTAAAGGAAATTTGTAAGATTAGCAATATGTTTGGATATGCAGAGCTGTTACCATCAAC
TTATACTCAAACTATGTATTATAAATTTAATAAGGAGATAAATGAAAAGAATTTTATTTCTGTAGTTATTAAAGAGAAAA
AGGATTTATGGGAAGCTTTAAAGACTATGCTTAAACAGGAATTAAAGGAGGATTAG

Upstream 100 bases:

>100_bases
CTATGGTAGAGGAAATGAAACGAAATGGTTATTGTCTTCATTGTTGTGATGTAATATTAAAATATGCTGCTAACAACTTA
TGGAAGGACTAATTTAGAAT

Downstream 100 bases:

>100_bases
TAAAATGAGCTACACTTTAAGGGAGATTGAAGAATGGAACGATAAAATAGAGAAAAAAGTAATAGAATATGGATTAGACT
TTTACAATCAAGAATTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MAIFRDRTDKQVDHDRAIEDKRRHRQLVEKSIKENLGDILSEESIVGQSKNKKFKIPIKSIKEYQFVYGKNSKGVATGTG
EEKRGDKIESGSKKAMGKGNKGAGNEEGDEIYETEITLDELMEYISDELNLPNLDEKKYSEIITDSCGKKKGYQRHGIRP
RLAKKRTVMAKISRKQSKKRALIEEGKDYKTERFPFREEDLRYYKVKMQPKKASNAVMIFIMDASGSMDSTKKYLARSYF
FVLSRFLKRKYNNIAFEFIYHTTIAKRVSEYEFFHKSESGGTYISSGIVEAIKLIDEKYPPSEWNIYPVYASDGDNWSED
NVKAIESVKEICKISNMFGYAELLPSTYTQTMYYKFNKEINEKNFISVVIKEKKDLWEALKTMLKQELKED

Sequences:

>Translated_391_residues
MAIFRDRTDKQVDHDRAIEDKRRHRQLVEKSIKENLGDILSEESIVGQSKNKKFKIPIKSIKEYQFVYGKNSKGVATGTG
EEKRGDKIESGSKKAMGKGNKGAGNEEGDEIYETEITLDELMEYISDELNLPNLDEKKYSEIITDSCGKKKGYQRHGIRP
RLAKKRTVMAKISRKQSKKRALIEEGKDYKTERFPFREEDLRYYKVKMQPKKASNAVMIFIMDASGSMDSTKKYLARSYF
FVLSRFLKRKYNNIAFEFIYHTTIAKRVSEYEFFHKSESGGTYISSGIVEAIKLIDEKYPPSEWNIYPVYASDGDNWSED
NVKAIESVKEICKISNMFGYAELLPSTYTQTMYYKFNKEINEKNFISVVIKEKKDLWEALKTMLKQELKED
>Mature_390_residues
AIFRDRTDKQVDHDRAIEDKRRHRQLVEKSIKENLGDILSEESIVGQSKNKKFKIPIKSIKEYQFVYGKNSKGVATGTGE
EKRGDKIESGSKKAMGKGNKGAGNEEGDEIYETEITLDELMEYISDELNLPNLDEKKYSEIITDSCGKKKGYQRHGIRPR
LAKKRTVMAKISRKQSKKRALIEEGKDYKTERFPFREEDLRYYKVKMQPKKASNAVMIFIMDASGSMDSTKKYLARSYFF
VLSRFLKRKYNNIAFEFIYHTTIAKRVSEYEFFHKSESGGTYISSGIVEAIKLIDEKYPPSEWNIYPVYASDGDNWSEDN
VKAIESVKEICKISNMFGYAELLPSTYTQTMYYKFNKEINEKNFISVVIKEKKDLWEALKTMLKQELKED

Specific function: Unknown

COG id: COG2718

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0229 family [H]

Homologues:

Organism=Escherichia coli, GI1788084, Length=411, Percent_Identity=25.7907542579075, Blast_Score=155, Evalue=6e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014230
- InterPro:   IPR006698
- InterPro:   IPR002035 [H]

Pfam domain/function: PF04285 DUF444 [H]

EC number: NA

Molecular weight: Translated: 45499; Mature: 45368

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFRDRTDKQVDHDRAIEDKRRHRQLVEKSIKENLGDILSEESIVGQSKNKKFKIPIKS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHH
IKEYQFVYGKNSKGVATGTGEEKRGDKIESGSKKAMGKGNKGAGNEEGDEIYETEITLDE
HHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHEEHHCCHHH
LMEYISDELNLPNLDEKKYSEIITDSCGKKKGYQRHGIRPRLAKKRTVMAKISRKQSKKR
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHH
ALIEEGKDYKTERFPFREEDLRYYKVKMQPKKASNAVMIFIMDASGSMDSTKKYLARSYF
HHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
FVLSRFLKRKYNNIAFEFIYHTTIAKRVSEYEFFHKSESGGTYISSGIVEAIKLIDEKYP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
PSEWNIYPVYASDGDNWSEDNVKAIESVKEICKISNMFGYAELLPSTYTQTMYYKFNKEI
CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
NEKNFISVVIKEKKDLWEALKTMLKQELKED
CCCHHEEHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIFRDRTDKQVDHDRAIEDKRRHRQLVEKSIKENLGDILSEESIVGQSKNKKFKIPIKS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHH
IKEYQFVYGKNSKGVATGTGEEKRGDKIESGSKKAMGKGNKGAGNEEGDEIYETEITLDE
HHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHEEHHCCHHH
LMEYISDELNLPNLDEKKYSEIITDSCGKKKGYQRHGIRPRLAKKRTVMAKISRKQSKKR
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHH
ALIEEGKDYKTERFPFREEDLRYYKVKMQPKKASNAVMIFIMDASGSMDSTKKYLARSYF
HHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
FVLSRFLKRKYNNIAFEFIYHTTIAKRVSEYEFFHKSESGGTYISSGIVEAIKLIDEKYP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
PSEWNIYPVYASDGDNWSEDNVKAIESVKEICKISNMFGYAELLPSTYTQTMYYKFNKEI
CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
NEKNFISVVIKEKKDLWEALKTMLKQELKED
CCCHHEEHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA