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The map label for this gene is yqfA [H]

Identifier: 187934459

GI number: 187934459

Start: 56664

End: 57311

Strand: Reverse

Name: yqfA [H]

Synonym: CLL_A0056

Alternate gene names: 187934459

Gene position: 57311-56664 (Counterclockwise)

Preceding gene: 187934054

Following gene: 187932894

Centisome position: 1.51

GC content: 27.78

Gene sequence:

>648_bases
ATGAATAAATATTTAAGAGAACCGGTTAATGGATTAACACACCTTATTGGTGCAATTTTATCACTAGTTGGATTAGTTTT
AATGATAATTAAAGTAAACATATCACAAGGATCATTGATAGAATATGTATCTATCATTCTTTTTGGAATTAGTATGATTT
TATTATATAGTGCTTCGGCAACTTACCATTCTGTTATTGCAGATTCGAAAATAATTAAACATTTAAAAAAAGTAGATCAC
TCTATGATTTTTGTACTTATAGCAGGATCTTATGCACCATTTTGCTTAATTGCATTACAAAACTCTATTGGTAATAAACT
TTTTATAGCAGTTGCTACATCTGCTTTAGTTGGGATAATATTTAAAATTTGTTGGGTTACATGTCCTAAATGGTTAAGTA
GCGTTATATATATTACTATTGGTTGGTTTGCTATTTTTGCAATTTACCCATTATCAATAGCACTTTCACCAATAGGTGTA
AGCCTACTTGTTTTAGGTGGATTGATGTATACAATTGGTGGGGTAATATATGCCTTAAAGAAAGATAAAATAAAAATAGG
CGTTTTTGGATCTCATGAAATATTTCATGTTTTCATAATGCTTGGAACCTTATTTCATTTCATTTGTGTTTTTAATTATA
TAATTTAA

Upstream 100 bases:

>100_bases
ATAAGTTTTTATGGTCTTTGACTTTTATATAACTATATATAATAATATTAGTATAATATCATATAGTTTTAAAAACTATA
TATTGAGTATGGAGGTATTT

Downstream 100 bases:

>100_bases
AAAGTATTTGTAGATTTAGATAAATAAAAATAGATTAACTTTTAAAACAAATGAAAAAAGCACTCCATTTAACTAAAAAT
GGTAGTGCTTTTATTTATCA

Product: hemolysin-3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNKYLREPVNGLTHLIGAILSLVGLVLMIIKVNISQGSLIEYVSIILFGISMILLYSASATYHSVIADSKIIKHLKKVDH
SMIFVLIAGSYAPFCLIALQNSIGNKLFIAVATSALVGIIFKICWVTCPKWLSSVIYITIGWFAIFAIYPLSIALSPIGV
SLLVLGGLMYTIGGVIYALKKDKIKIGVFGSHEIFHVFIMLGTLFHFICVFNYII

Sequences:

>Translated_215_residues
MNKYLREPVNGLTHLIGAILSLVGLVLMIIKVNISQGSLIEYVSIILFGISMILLYSASATYHSVIADSKIIKHLKKVDH
SMIFVLIAGSYAPFCLIALQNSIGNKLFIAVATSALVGIIFKICWVTCPKWLSSVIYITIGWFAIFAIYPLSIALSPIGV
SLLVLGGLMYTIGGVIYALKKDKIKIGVFGSHEIFHVFIMLGTLFHFICVFNYII
>Mature_215_residues
MNKYLREPVNGLTHLIGAILSLVGLVLMIIKVNISQGSLIEYVSIILFGISMILLYSASATYHSVIADSKIIKHLKKVDH
SMIFVLIAGSYAPFCLIALQNSIGNKLFIAVATSALVGIIFKICWVTCPKWLSSVIYITIGWFAIFAIYPLSIALSPIGV
SLLVLGGLMYTIGGVIYALKKDKIKIGVFGSHEIFHVFIMLGTLFHFICVFNYII

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=209, Percent_Identity=35.8851674641148, Blast_Score=124, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 23617; Mature: 23617

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKYLREPVNGLTHLIGAILSLVGLVLMIIKVNISQGSLIEYVSIILFGISMILLYSASA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
TYHSVIADSKIIKHLKKVDHSMIFVLIAGSYAPFCLIALQNSIGNKLFIAVATSALVGII
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHH
FKICWVTCPKWLSSVIYITIGWFAIFAIYPLSIALSPIGVSLLVLGGLMYTIGGVIYALK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
KDKIKIGVFGSHEIFHVFIMLGTLFHFICVFNYII
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNKYLREPVNGLTHLIGAILSLVGLVLMIIKVNISQGSLIEYVSIILFGISMILLYSASA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
TYHSVIADSKIIKHLKKVDHSMIFVLIAGSYAPFCLIALQNSIGNKLFIAVATSALVGII
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHH
FKICWVTCPKWLSSVIYITIGWFAIFAIYPLSIALSPIGVSLLVLGGLMYTIGGVIYALK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
KDKIKIGVFGSHEIFHVFIMLGTLFHFICVFNYII
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]