| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933844
Identifier: 187933844
GI number: 187933844
Start: 34346
End: 34930
Strand: Reverse
Name: 187933844
Synonym: CLL_A0032
Alternate gene names: NA
Gene position: 34930-34346 (Counterclockwise)
Preceding gene: 187932700
Following gene: 187932470
Centisome position: 0.92
GC content: 26.67
Gene sequence:
>585_bases ATGGTCGGCGAAAAAGTTGCGAAATTCAGAAAAATTTTAGGTATAAGTCAAAGAGAATTGGGACGACGAACTGGTTTATC TGGTCAAATGATTTCTAAAATAGAAAATAATCTTACTAATCCATCATTAGAAACCTTAGGTAAAATTGCTAGTGTTCTAA ATGTTAATTTAAATAATTTGTTAGATATGGTGAAAACACCAGATTGCTTAATTGTGAATGATACATCTTTAGATATAAAT TATTTGCTAGATAATATACGTGAATTAATAATGACAAATAAGGATAATAATAAATTAATTTATGAATCATTTGATAGCTT AGTTACTTGTTTTATGGTTCTTTTTTTACCATTTGCAGAGAATCCTAAAGAACATAAAAATCAAAACGTTACTCTTTTGA ATGAACTAATGTTTGAAATCAATCAATTGATCGAATCAGATGGACTTATCTCTCCTTATAACTATCCTGATGATTATTTA GAAAATTCAGGAAAAACAATACATAAAATATACACTATCTTAGAAAAAATACGTTTACTTAAATTTAGTAGCAGAAAATA CAGAAATAATATGGAGGGCGAATAG
Upstream 100 bases:
>100_bases ATAATGCTAACTATATATAGTTGTCAATACTTTAATAAAAATTTTCCTTTTGACAACTATTAGTAGGTGTTATAAACTAA CCCTAAAGGAGATGATATTA
Downstream 100 bases:
>100_bases ATGGCAAGTTATGAGCAACTAACTAAATACAACTGGAAGGCTACTGTAAGCCTTGGATATGAAAATGGAAAACAAGTTAA GACACGTAAACAAGGATTTA
Product: adenine-specific DNA methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MVGEKVAKFRKILGISQRELGRRTGLSGQMISKIENNLTNPSLETLGKIASVLNVNLNNLLDMVKTPDCLIVNDTSLDIN YLLDNIRELIMTNKDNNKLIYESFDSLVTCFMVLFLPFAENPKEHKNQNVTLLNELMFEINQLIESDGLISPYNYPDDYL ENSGKTIHKIYTILEKIRLLKFSSRKYRNNMEGE
Sequences:
>Translated_194_residues MVGEKVAKFRKILGISQRELGRRTGLSGQMISKIENNLTNPSLETLGKIASVLNVNLNNLLDMVKTPDCLIVNDTSLDIN YLLDNIRELIMTNKDNNKLIYESFDSLVTCFMVLFLPFAENPKEHKNQNVTLLNELMFEINQLIESDGLISPYNYPDDYL ENSGKTIHKIYTILEKIRLLKFSSRKYRNNMEGE >Mature_194_residues MVGEKVAKFRKILGISQRELGRRTGLSGQMISKIENNLTNPSLETLGKIASVLNVNLNNLLDMVKTPDCLIVNDTSLDIN YLLDNIRELIMTNKDNNKLIYESFDSLVTCFMVLFLPFAENPKEHKNQNVTLLNELMFEINQLIESDGLISPYNYPDDYL ENSGKTIHKIYTILEKIRLLKFSSRKYRNNMEGE
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22309; Mature: 22309
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGEKVAKFRKILGISQRELGRRTGLSGQMISKIENNLTNPSLETLGKIASVLNVNLNNL CCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHH LDMVKTPDCLIVNDTSLDINYLLDNIRELIMTNKDNNKLIYESFDSLVTCFMVLFLPFAE HHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC NPKEHKNQNVTLLNELMFEINQLIESDGLISPYNYPDDYLENSGKTIHKIYTILEKIRLL CCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH KFSSRKYRNNMEGE HHHHHHHCCCCCCC >Mature Secondary Structure MVGEKVAKFRKILGISQRELGRRTGLSGQMISKIENNLTNPSLETLGKIASVLNVNLNNL CCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHH LDMVKTPDCLIVNDTSLDINYLLDNIRELIMTNKDNNKLIYESFDSLVTCFMVLFLPFAE HHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC NPKEHKNQNVTLLNELMFEINQLIESDGLISPYNYPDDYLENSGKTIHKIYTILEKIRLL CCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH KFSSRKYRNNMEGE HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA